#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 18, 2025; 2:20 GMT TreeBASE (cc) 1994-2008 Study reference: Crous P.W., & Groenewald J.Z. 2017. The Genera of Fungi – G 4: Camarosporium and Dothiora. IMA Fungus, 8(1): 131-152. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S21172] [ The following blocks are input data for analysis step 21062 ] BEGIN TAXA; TITLE TaxaForAnalysisStep21062; DIMENSIONS NTAX=38; TAXLABELS Dothidea_berberidis_EU167601.1 Dothidea_hippophaeos_AF027763.1 Dothidea_hippophaeos_KF147923.1 Dothidea_insculpta_AF027764.1 Dothidea_insculpta_KM388543.1 Dothidea_muelleri_EU167593.1 Dothidea_puccinioides_CBS_193.58 Dothidea_ribesia_CPC_30638 Dothidea_ribesia_CPC_30689 Dothidea_ribesia_CPC_30713 Dothidea_sambuci_AY930108.1 Dothidea_sambuci_DQ491505.1 Dothidea_sp._KM388544.1 Dothidea_sp._KM388545.1 Dothiora_agapanthi_KU728498.1 Dothiora_bupleuricola_KU728499.1 Dothiora_buxi_KX765294.1 Dothiora_cactacearum_CPC_15585 Dothiora_cactacearum_CPC_15587 Dothiora_cannabinae_AJ244243.1 Dothiora_ceratoniae_KF251151.1 Dothiora_ceratoniae_KU728501.1 Dothiora_elliptica_KU728502.1 Dothiora_europaea_AJ244244.1 Dothiora_laureolae_KU728503.1 Dothiora_maculans_KU728504.1 Dothiora_maculans_KU728507.1 Dothiora_oleae_KU728509.1 Dothiora_oleae_KU728511.1 Dothiora_phaeosperma_KU728512.1 Dothiora_phillyreae_KU728513.1 Dothiora_prunorum_AJ244248.1 Dothiora_pyrenophora_CPC_30632 Dothiora_pyrenophora_CPC_30634 'Dothiora rhamni-alpinae AJ244245.1' Dothiora_sorbi_KU728514.1 Dothiora_viburnicola_KU728515.1 Pezicula_cinnamomea_KR859133.1 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M41549] TITLE Dothidea_and_Dothiora_ITS_alignment; LINK TAXA = TaxaForAnalysisStep21062; DIMENSIONS NCHAR=926; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Dothidea_berberidis_EU167601.1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTAA-AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGAG-TTAATGGGGACCCGGAACCACCGCTTAAAA--------------------AACGGCCGGTCATCCCCACTA-CTTCCAACCCTTTGTTGTTATAACTACCTCGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCGGTC--TTCGGACAGGTGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGACGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothidea_hippophaeos_AF027763.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAGGA-CATTAAAAGA------------TTGAGTGTCG------------------------------CGACCTAAAAAATCGCGACCA-CTTCCAACCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTC--CTCGGACAGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTTATAGGTTGACCTCGGAT------------------------------------------------------------------ Dothidea_hippophaeos_KF147923.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAGGA-CATTAAAAGA------------TTGAGTGTCG------------------------------CGACCTAAAAAATCGCGACCA-CTTCCAGCCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTC--CTCGGACAGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTTATAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAATA--GGATCATTAAAAGAA Dothidea_insculpta_AF027764.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAGGATCATTAAAAGA------------ATTGGAGTGACT------------------------------------AACCGTCCTCCGA-CTTCCAACCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTC--TTCGGACAGGTGAGTGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTC-TAGGTTGACCTCGGAT------------------------------------------------------------------ Dothidea_insculpta_KM388543.1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGA------------ATTGGAGTGACT------------------------------------AACCGTCCTCCGA-CTTCCAACCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTC--TTCGGACAGGTGAGTGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTT----ATT--C-TAGG-TGAC------------------------------------------------------------------------- Dothidea_muelleri_EU167593.1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTAA-AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGATGTGAATGTGGACCCCGG----------------------------------------------TCC-GCATACCTTCCAACCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTC--CTCGGACAGGTGAGCGCCCGCCGGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGACGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTA-TAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothidea_puccinioides_CBS_193.58 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGA--------AGCACGAGGACCCGG-----------------------------GAAACCGGTGTTCCTCGACTA-CTTCCAACCCTCTGTTGTTATAACTACCTCGTTGCTTTGGCGGGA-CCGTTT-GG--TC-CTCCGAGCGCACCAGTC--TTCGGACAGGTGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTC-TAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAA------------------------------- Dothidea_ribesia_CPC_30638 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AACGAGTTTAATTCGGACGGGAGGCGAACGCTAGAAAGCCCCCTGAAAAGGGGGTGTCGCTACCACCCCGTC-CGGTAACTTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGTTT-GG--TT-CTCCGAGCGCACCAGTC--CTCGGACAGGTGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTA-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCAT------------------------------------ Dothidea_ribesia_CPC_30689 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AACGAGTTTAATTCGGACGGGAGGCGAACGCTAGAAAGCCCCCTGAAAAGGGGGTGTCGCTACCACCCCGTC-CGGTAACTTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGTTT-GG--TT-CTCCGAGCGCACCAGTC--CTCGGACAGGTGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTA-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCAT------------------------------------ Dothidea_ribesia_CPC_30713 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATT-AACGAGTTTAATTCGGACGGGAGGCGAACGCTAGAAAGCCCCCTGAAAAGGGGGTGTCGCTACCACCCCGTC-CGGTAACTTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGTTT-GG--TT-CTCCGAGCGCACCAGTC--CTCGGACAGGTGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTA-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATC--------------------------------- Dothidea_sambuci_AY930108.1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAAGA-ATGTTGGGGGACCCGGGGC--------------------------------AACCCGGACAATCCC-CTTATACTTCCCACCCTTTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-ATCCGAGCGCACCAGTC--TTCGGACAGGTGAGCGCCTGCCAGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGCCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTC-TAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothidea_sambuci_DQ491505.1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAAAAGA-ATGTTGGGGGACCCGGGGC--------------------------------AACCCGGACAATCCC-CTTATACTTCCCACCCTTTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-ATCCGAGCGCACCAGTC--TTCGGACAGGTGAGCGCCTGCCAGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGCCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTC-TAGGTTGACCTCGGATCAGGTAGGGATA------------------------------------------------------ Dothidea_sp._KM388544.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTGAATGCGGACCCGGGGC--------------------------------TCGCCCCGTCGGTCC-GCATACCTTCCAACCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTCCTCTCGGACAGGTGAGCGCCCGCCGGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-CCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTTT--ATTTTC-TAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATA----------------------------- Dothidea_sp._KM388545.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------????????TGCGGACCCGGGGC--------------------------------TCGCCCCGTCGGTCC-GCATACCTTCCAACCCTCTGTTGTTATAACTACCTTGTTGCTTTGGCGGGA-CCGTTC-GG--TC-CTCCGAGCGCACCAGTCCTCTCGGACAGGTGAGCGCCCGCCGGAGTCCAACCAAACTCTTGT-TTTTAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-CCGTCCGTCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATC-GAACGTCTTATAAGCTTGGTGGGACTCCATTGCC-GTTAAACCTTT---ATT--C-TAGG-TGACC------------------------------------------------------------------------ Dothiora_agapanthi_KU728498.1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAAAGGTTTCCACTCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--T-TTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCA------------------------------------- Dothiora_bupleuricola_KU728499.1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-GGTTTC-CACCGAGCGCGCCGGTC--CTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTACAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--TATTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothiora_buxi_KX765294.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCTGCGGAAGGATCATTAAAAGAG-----------ACAGGGC----------------------------------------CCTTCGGGGCCCGA-CCTCCCACCCTCTGTTGTTATAACTACCTCGTTGCTTTGGCGGGACCCGCGA-AG-GTCCTCCCGAGCGCGCCAGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTTTTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCATCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGATTGGTGGGGCCTCATTGCC-GTTAAACCTTTT-ATTTTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA-TA----------------------------- Dothiora_cactacearum_CPC_15585 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAAAGTTGGTCAAACTTGGTCATTTAGAGGATGTAA-AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGAG-----------ACAGGAC----------------------------------------CCCTCGGGGTCCGA-CCTCCCACCCTCTGTTGTTATAACTACCTCGTTGCTTTGGCGGGA-CCGCGA-GG-GTCCTCCCGAGCGCGCCAGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTTTTCAAACCAGTCGTCTGAGTACAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCACCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCCTACAAGCTTGGTGGCGCCTCATTGCC-GTTAAACCTTTT--ATTTCT-CAGGTTGACCTCGGATCAGGTAGGGATA------------------------------------------------------ Dothiora_cactacearum_CPC_15587 CAGGGAGGTCGGCAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCACCCAGGGACGGAAAGTTGGTCAAACTTGGTCATTTAGAGGATGTAA-AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGAG-----------ACAGGAC----------------------------------------CCCTCGGGGTCCGA-CCTCCCACCCTCTGTTGTTATAACTACCTCGTTGCTTTGGCGGGA-CCGCGA-GG-GTCCTCCCGAGCGCGCCAGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTTTTCAAACCAGTCGTCTGAGTACAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCACCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCCTACAAGCTTGGTGGCGCCTCATTGCC-GTTAAACCTTTT--ATTTCT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATAT---------------------------------- Dothiora_cannabinae_AJ244243.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTCGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCGA-AG-GTTCTCCCGAGCGCGCCAGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGGGACCTCATTGCC-GTTAAACCTTTT--ATTTTT-CA-------------------------------------------------------------------------------- Dothiora_ceratoniae_KF251151.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-GG-TTTCCACCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCA-TGCC-GTTAAACCTTTT--TTTTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAAC-------------------------------------------- Dothiora_ceratoniae_KU728501.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-GG-TTTCCACCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCA-TGCC-GTTAAACCTTTT--T-TTTT-CAGGTTGACCTCGGATCAGGTAGGGATACC---------------------------------------------------- Dothiora_elliptica_KU728502.1 CGGTGAAATGGGCAATCCGCAGCCAACGCCTAAGGTTAAACCTGGTTTAACTATGGTAGGGGTTCACAGACTAAGTGGTAGTGGGTGTGGCTCGTCAGAGCCATGCTTAAGATATAGTCGGGCCCCCGGGGAAACCTGGGGGGTAAGTACACTGCAAACCAGTTTGCAGATTGCCTTGGTGGATGTCCCTCCTGCGTGCTGCGGGTTCGACGTGAAGCCTCGGTCAATCAAATGACCACAACAAACCGTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCGA-AG-GTTCTCCCGAGCGCGCCGGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGTCTTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGCCTTCACGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTAAAACCTTTT--ATT-------------------------------------------------------------------------------------- Dothiora_europaea_AJ244244.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATT-AAAGAGT----------TAAGGG------------------------------------------TCTCCGG-CCCGAACCTCCAACCCTCTGTCGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCGA-AG-GTTCTCCCGAGCGCGCCGGTC--TTCGGACGGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATATAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGCCG-AAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTT{CT}CTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAAAGTCTTATAAGCTTGGTGGGACCTCATTGCC-GTTAAACCCTCC--CG--------------------------------------------------------------------------------------- Dothiora_laureolae_KU728503.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGGCCCCGAACCTCCAACCCTCTGTCGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCGA-AG-GTCCTCCCGAGCGCGCCAGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGG?GTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGGGACCTCATTGCC-GTTAAACCCTTT-TATATTC-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA-TA-GCCGGAAGGAAC---------------- Dothiora_maculans_KU728504.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-AG-GTTCTCCCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--T-TTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothiora_maculans_KU728507.1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-AG-GTTCTCCCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--T-TTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothiora_oleae_KU728509.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-GG-TTTCCACCGAGCGCGCCGGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--T-TTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothiora_oleae_KU728511.1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-GG-TTTCCACCGAGCGCGCCGGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--T-TTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothiora_phaeosperma_KU728512.1 TGGTGAAATGGGCAATCCGCAGCCAACGCCTAAGGTTAAACCTGGTTTAACTACGGTAGGGGTTCACAGACTAAGTGGTAGTGGGTGTGGCC--TTCGGGCCATGCTTAAGATATAGTCGGGCCCCCGGGGAAACCTGGGGGGTAAGTACACTGCAAATCAGTTTGCAGGTCGCCTTGGTGGATGCCTCGACCGCGTGCTGCGGGCCCGGCGTGAAGCCTCGGTCGACCAAA-GACTACAACAAACCGTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCCGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGTGA-AG-GTTCTCCCGAGCGCGCCAGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTTTTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGCCT-CACGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCACCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGGGGCCTCATTGCC-GTTAAACCTTTT--A-TATT-CAGGTTGACCTCGGATCAGGTAGGA--------------------------------------------------------- Dothiora_phillyreae_KU728513.1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-GG-TTTCCACCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT--TATTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Dothiora_prunorum_AJ244248.1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-AG-GTTCTCCCGAGCGCGCCGGTC--TTCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGCCGTAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTT-TATATTT-CAGGTTGACC------------------------------------------------------------------------ Dothiora_pyrenophora_CPC_30632 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCCGG-CCCGAACCTCCAACCCTCTGTCGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-AG-GTTCTCCCGAGCGCGCCGGTC--CCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGCCGTAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTTATATATTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAAC-------------------------------------------- Dothiora_pyrenophora_CPC_30634 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCCGG-CCCGAACCTCCAACCCTCTGTCGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCAA-AG-GTTCTCCCGAGCGCGCCGGTC--CCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGCCGTAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTTATATATTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAG--------------------------------------- 'Dothiora rhamni-alpinae AJ244245.1' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACCTCGTTGCTTTGGCGGGA-CCGCAA-GG--TTCCCCCGAGCGCGCCGGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGTTTTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-CCGTCCGCCGTAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCCCGTTAAACCTCA-ATTTTTTT-CAGGTTGACC------------------------------------------------------------------------ Dothiora_sorbi_KU728514.1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGGTTTCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCTGG-CCCGAACCTCCAACCCTCTGTCGTTATAACTACTTCGTTGCTTTGGCGGGA-CCGCGA-AG-GTTCTCCCGAGCGCGCCAGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTTAAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGCCGTAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTTATATTATT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAA------------------------------- Dothiora_viburnicola_KU728515.1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAG-----------TAAGGG------------------------------------------TCTCCGG-CCCGAACCTCCAACCCTCTGTTGTTATAACTACACCGTTGCTTTGGCGGGA-CCGCGAAGGTCTCCACCCGAGCGCGCCGGTC--TCCGGACAGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGT-TTAAAACCAGTCGTCTGAGTACAAACTTTTAATTATATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGTCG-AAAGACGGGCGTGCCTCGAAGACCTCGGCGGGGTTTCTCCAACTTCGGGCGTAGTAGAGTTAAATCAAAACGTCTTATAAGCTTGGTGAGATCTCATTGCC-GTTAAACCTTTA--ATTTTT-CAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG Pezicula_cinnamomea_KR859133.1 TGCTAGAATGGACGATCCGCAGCGAAGCCCCTAGACCA----------------GGGGAACGTTCACAGACTAAGTGGTTGTGGGTAGGAGG-----GACTCCTGCTTAAGATATAGTCGGGCCGGCGCGGAAA------------------------------------------------------------CGCGCTGGGGATTCG------------------------CAAGAACGTAAACCGCTCCGTAGGTGAACCTGCGGAGGGATCATT-ACAGAG-----------ACTCTG-----------------------------------------CCCTTTGG-GTAGA-CCTCCCACCCTGTGTCGTTATACCT---TTGTTGCTTTGGCGGG--CCGCGG-GG-CTC--CGGCCCTGCCCCCGGC--TCCGGCTAGG-GCGTGCCCGCCAGAGGACCCTCAAACCTGAAT-GTTAG---TGTCGTCTGAGTACTATATAAT-----AGTTAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACC-CTCAAGCTCTGCTTGGTCTTGGGCG-TCACCGGTCC------CCGGTGTGCCTTAAAATCAGTGGCGGCG-CCATCTGGCTCTAAGCGTAGTACATAC------TCTCGCTACAGACGCCCGGTGGA---TGCTGGCC-AGCAACCCCCAA-TCTATC--AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGC-------------------------------------- ; END; BEGIN SETS; CHARSET combined (CHARACTERS = Dothidea_and_Dothiora_ITS_alignment) = 283-309 337-839; END; [ The following blocks are output data for analysis step 21062 ] BEGIN TREES; TITLE Fig._3._Parsimony_phylogeny_of_Dothidea_and_Dothiora_ITS_sequences; LINK TAXA = TaxaForAnalysisStep21062; TREE Fig._3 = [&R] (((((((((Dothidea_ribesia_CPC_30638:0.0,Dothidea_ribesia_CPC_30689:0.0,Dothidea_ribesia_CPC_30713:0.0):21.0,Dothidea_berberidis_EU167601.1:11.0):13.0,(Dothidea_sambuci_DQ491505.1:0.0,Dothidea_sambuci_AY930108.1:0.0):16.0):6.0,(Dothidea_muelleri_EU167593.1:16.0,(Dothidea_sp._KM388544.1:0.0,Dothidea_sp._KM388545.1:1.0):4.0):11.0):16.0,Dothidea_puccinioides_CBS_193.58:13.0):12.0,(Dothidea_hippophaeos_KF147923.1:2.0,Dothidea_hippophaeos_AF027763.1:0.0):9.0):12.0,(Dothidea_insculpta_AF027764.1:0.0,Dothidea_insculpta_KM388543.1:2.0):9.0):24.0,((Dothiora_buxi_KX765294.1:6.0,(Dothiora_cactacearum_CPC_15585:0.0,Dothiora_cactacearum_CPC_15587:0.0):8.0):11.0,((Dothiora_cannabinae_AJ244243.1:1.0,Dothiora_laureolae_KU728503.1:4.0):3.0,(((((((Dothiora_bupleuricola_KU728499.1:5.0,Dothiora_phillyreae_KU728513.1:0.0):1.0,(Dothiora_ceratoniae_KU728501.1:0.0,Dothiora_ceratoniae_KF251151.1:1.0):1.0,(Dothiora_oleae_KU728509.1:0.0,Dothiora_oleae_KU728511.1:0.0):1.0):2.0,(Dothiora_agapanthi_KU728498.1:1.0,Dothiora_viburnicola_KU728515.1:14.0):3.0):3.0,Dothiora_maculans_KU728504.1:0.0,Dothiora_maculans_KU728507.1:0.0):4.0,(Dothiora_elliptica_KU728502.1:6.0,(Dothiora_prunorum_AJ244248.1:1.0,(((Dothiora_pyrenophora_CPC_30632:0.0,Dothiora_pyrenophora_CPC_30634:0.0):2.0,Dothiora_sorbi_KU728514.1:2.0):1.0,'Dothiora rhamni-alpinae AJ244245.1':11.0):2.0):1.0):3.0):5.0,Dothiora_europaea_AJ244244.1:11.0):1.0,Dothiora_phaeosperma_KU728512.1:7.0):2.0):6.0):8.0):53.0,Pezicula_cinnamomea_KR859133.1:81.0):0.0; [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr105281] END;