#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 22, 2026; 17:29 GMT

TreeBASE (cc) 1994-2008

Study reference:
Abreu V.P., & Pereira O.L. 2017. Dictyosporina ferruginea. Fungal Diversity Notes,
.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S21221]

[ The following blocks are input data for analysis step 21173 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep21173;
        DIMENSIONS NTAX=10;
        TAXLABELS
            Dictyosporina_ferruginea_COAD2272
            Mycosphaerella_punctiformis_CBS113265
            Neoceratosperma_eucalypti_CPC23465
            Pseudocercospora_vitis_CBS132012
            Stigmina_platani_CBS110755
            Xenomycosphaerella_elongata_CBS120735
            Xenosonderhenia_syzygii_CPC19790
            Xenostigmina_zilleri_CBS115686
            Xenostigmina_zilleri_CBS124108
            Zasmidium_cellare_CBS146.36
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M41698]

	TITLE Dictyosporina_ferruginea_LSU;
	LINK TAXA = TaxaForAnalysisStep21173;
	DIMENSIONS NCHAR=830;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                 10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830   ]
[                                                  .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .   ]
Dictyosporina_ferruginea_COAD2272         ??????????????????TTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGCGCAGCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCCCGCAACCAGACTTCGCGGCGG-TGTTCCGCTGGTCTTCTGACCAGTCCACTCTCCGCCGCG-AGGCCAACATCATCTGGGACCGCCGGAT-AAGACCTCGGGAATGTAGCTTGCTCCGGTAAGTGTTATA--GCCCGCGGTGATGCGGCGAGTCCCGGGTGAGGTCCGCACTTCGGTAAGGATGTTGGCGTAATGGTTGTCGGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGGAATGAAAGTGAACGGAGGTGGGAA---CGCAAG-TGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGT???????????????????????????
Mycosphaerella_punctiformis_CBS113265     AAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCCCGCACCTTCTACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCTAGGCAG-TGTTCCGCCGGTCTTTTGACCGGTCTACTCTCTGTCTCG-AGGCCAACATCATCTGGGACCGCCGGAT-AAGACCTTAGGAATGTAGCTCCCCTCGGGGAGTGTTATA--GCCTCTGGTGATGCGGCGCGTCTCGGGTGAGGTCCGCGCTTCGGCAAGGATGTTGGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAA--GCGTAAGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT
Neoceratosperma_eucalypti_CPC23465        AAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAATTGTAATTTGTAGAGGATGCTTCTGGGCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGCGCACCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTACAACCAGACTTCGTAGCGG-TGTTCCGCCGGTCTTCTGACCGGTTCATTCGCCGCCGCG-AGGCCAGCATCGTCTGGGGCCGCTGGAT-AAGACCGTTGGAATGTAGCTCCTCTCGGGGAGTGTTATA--GCCAGCGGTGATGCAGCGAGCTCCGGGCGAGGTCCGCACTTCGGTAAGGATGCTGGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAA---CTTTTG-TGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT
Pseudocercospora_vitis_CBS132012          AAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGGTAGCGGCCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTTGCACCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCCCGCAACCAGACTTTGCGGCAG-TGTTCCGCCGGTCTTCTGACCGGTCTACTCGCTGTCGTG-AGGCCATCATCGTCTGGGACCGCTGGAT-AAGACCTTAGGAATGTAGCTCCCTTCGGGGAGTGTTATA--GCCTCTGGTGATGCAGCGCGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGATGGCGTAATGGTTGTCGGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAA--CTTTTTG-TGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA????????????????????????????????????????????????????????????????????????
Stigmina_platani_CBS110755                AAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGGTAGCGGCCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTTGCACCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCCCGCAACCAGACTTTGCGGCAG-TGTTCGGCTGGTCTTCTGACCGGTTTACTCGCTGCCGTG-AGGCCATCATCGTCTGGGACCGCTGGAT-AAGACCTAGGGAATGTGGCTCCCCTCGGGGAGTGTTATA--GCCTCTGGTGATGCAGCGCGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGATGGCGTAATGGTTGTCGGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAA--CTTTTTG-TGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT
Xenomycosphaerella_elongata_CBS120735     AAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGGCAGCGGCCTGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGCGCACCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCGCGGCGG-TGTTCCGCCGGTCTTTTGACCGGTCCACTCGCCGCCGCG-AGGCCAACATCATCTGGGGCCGCCGGAT-AAGACCGTGGGAATGTAGCTCCCCTCGGGGAGTGTTATA--GCTCACGGTGATGCGGCGAGCCTCGGGTGAGGTCCGCACTTCGGTAAGGATGTTGGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAA---CGCAAG-TGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA????????????????????????????????????????????????????????????????????????
Xenosonderhenia_syzygii_CPC19790          AAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGGCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGAACGGCGCGCACCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCGCAGCGG-TGTTCCGCCGGTCCTCTGACCGGTCCACTCGCCGCCGCG-AGGCCAACATCATCTGGGGCCGCCGGAT-AAGACCGTAGGAATGTAGCTCCCCTCGGGGAGTGTTATA--GCCTGCGGTGATGCGGCGAGCCTCGGGTGAGGTCCGCACTTCGGTAAGGATGTTGGCGTAATGGTTGTTAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAA---CGCAAG-TGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT
Xenostigmina_zilleri_CBS115686            AAGCGGCAATAGCTCAAATTTGAAATCTGGCCCTTTCAGGGTCCGAGTTGTAATTTGCAGAGGGCGCTTTGGAGTCGGCAGCAGCCTAAGTTCCTTGGAACAGGTCATCATAGAGGGTGAGAATCCCGTATGTGGCT-GCTTGCCTTCGCCGTGTAAAGCCCCTTCGATGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACGTGCCCGTAGTTGCTCATCTGGGGTTCTCCCCAGTGCACTCTTCTATGGGCAGGCCAGCATCAGTCCGGGCGGTTGGAGAAAGACCTGTGTCACGTAGCTCTCTTCGGGGAGTGTTATAGGGCAGGTGG-AATGCAACCAGCCTGGACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCCTCGGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAGGGGCGAAAGACTAATCGAACTAT
Xenostigmina_zilleri_CBS124108            AAGCGGCAATAGCTCAAATTTGAAATCTGGCCCTTTCAGGGTCCGAGTTGTAATTTGCAGAGGGCGCTTTGGAGTCGGCAGCAGCCTAAGTTCCTTGGAACAGGTCATCATAGAGGGTGAGAATCCCGTATGTGGCT-GCTTGCCTTCGCCGTGTAAAGCCCCTTCGATGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACGTGCCCGTAGTTGCTCATCTGGGGTTCTCCCCAGTGCACTCTTCTATGGGCAGGCCAGCATCAGTCCGGGCGGTTGGAGAAAGACCTGTGTCACGTAGCTCTCTTCGGGGAGTGTTATAGGGCAGGTGG-AATGCAACCAGCCTGGACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCCTCGGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAGGGGCGAAAGACTAATCGAACTAT
Zasmidium_cellare_CBS146.36               AAGCGGCAACAGCTCAAATTTGAAACCTGGCGCTC---GCGTCCGGATTGTAATTTGCAGAGGATGCTTCTGGGCAGCGGCCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGCGACCGGCGCGCACCCTCCACGT--AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCCGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTCCCACCAGACTCCGCGGCGG-TGTTCCGCCGGCCTTTTGGCCGGTCCACTCGCCGCCGCG-GGGCCAGCATCGTCTGGGGCCGCCGGAT-AAGACCGTCAGAATGTAGCTCATT-----GAGTGTTATA--GCTGGCGGTGATGCGGCGCGCCCCGGGCGAGGTCCGCGCTTCGGCAAGGATGCTGGCGTAATGGTGGGCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAG---CTTCGG-CGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT{CG}TGACGTGCAAATCGATCGTCAAATTTGGGCATAGGGGCGAAAGACTAATCGAACCAT
;
END;

[ The following blocks are output data for analysis step 21173 ]
BEGIN TREES;
      TITLE Dictyosporina_ferruginea_LSU;
      LINK TAXA = TaxaForAnalysisStep21173;
      TREE 'LSU_tree' = [&R] ((Xenostigmina_zilleri_CBS115686:8.318799E-4,Xenostigmina_zilleri_CBS124108:8.180735E-4):0.12916275,(Mycosphaerella_punctiformis_CBS113265:0.01476179,(Pseudocercospora_vitis_CBS132012:0.001737701,Stigmina_platani_CBS110755:0.009655231):0.02318513,(Dictyosporina_ferruginea_COAD2272:0.0281283,(Xenomycosphaerella_elongata_CBS120735:0.007694284,Xenosonderhenia_syzygii_CPC19790:0.006793609,(Zasmidium_cellare_CBS146.36:0.05506226,Neoceratosperma_eucalypti_CPC23465:0.00987626):0.02085875):0.005665386):0.02039566):0.12916275);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr105569]


END;