#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 01, 2024; 14:53 GMT TreeBASE (cc) 1994-2008 Study reference: Fujiwara T., Uehara A., Iwasina T., Matsumoto S., Chao Y.S., Chang Y.H., & Watano Y. 2017. Allotetraploid cryptic species in Asplenium normale in the Japanese Archipelago, detected by chemotaxonomical and multi-locus genotype approaches. American Journal of Botany, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S21348] [ The following blocks are input data for analysis step 21301 ] BEGIN TAXA; TITLE TaxaForAnalysisStep21301; DIMENSIONS NTAX=32; TAXLABELS Asplenium_boreale_Allele_1_018 Asplenium_boreale_Taiwan_368 Asplenium_normale_Allele_a_MLG3_O Asplenium_normale_Allele_a_MLG4_N Asplenium_normale_Allele_b_MLG6_O Asplenium_normale_Allele_b_MLG8_O Asplenium_normale_Taiwan_360 Asplenium_normale_Taiwan_369_N Asplenium_normale_Taiwan_369_O Asplenium_normale_Taiwan_373 Asplenium_normale_Taiwan_378 Asplenium_normale_Taiwan_384 Asplenium_oligophlebium_var_iezimaense_342 Asplenium_oligophlebium_var_oligophlebium_029 Asplenium_oligophlebium_var_oligophlebium_153 Asplenium_oligophlebium_var_oligophlebium_164 Asplenium_shimurae_Alele_1_085 Asplenium_shimurae_Allele_2_085 Asplenium_trichomanes_066 allele_2_Asplenium_boreale_018 allele_a_MLG1_N allele_a_MLG1_O allele_a_MLG2_N allele_a_MLG3_N allele_a_MLG5_N allele_a_MLG5_O allele_a_MLG6_N allele_a_MLG7_O allele_a_MLG8_N allele_b_MLG2_O allele_b_MLG7_N allele_c_MLG4_O ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M41995] TITLE Asplenium_NIA_indels; LINK TAXA = TaxaForAnalysisStep21301; DIMENSIONS NCHAR=7; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7 8 9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z" MISSING=? GAP= -; MATRIX Asplenium_boreale_Allele_1_018 0010010 Asplenium_boreale_Taiwan_368 0011?11 Asplenium_normale_Allele_a_MLG3_O 0011?11 Asplenium_normale_Allele_a_MLG4_N 0011?10 Asplenium_normale_Allele_b_MLG6_O 0011?10 Asplenium_normale_Allele_b_MLG8_O 0011?10 Asplenium_normale_Taiwan_360 0011?10 Asplenium_normale_Taiwan_369_N 0011?10 Asplenium_normale_Taiwan_369_O 0011?10 Asplenium_normale_Taiwan_373 0011?10 Asplenium_normale_Taiwan_378 0011?10 Asplenium_normale_Taiwan_384 0011?10 Asplenium_oligophlebium_var_iezimaense_342 0011?10 Asplenium_oligophlebium_var_oligophlebium_029 0011?10 Asplenium_oligophlebium_var_oligophlebium_153 0011?10 Asplenium_oligophlebium_var_oligophlebium_164 0011?10 Asplenium_shimurae_Alele_1_085 0011?10 Asplenium_shimurae_Allele_2_085 0011?10 Asplenium_trichomanes_066 01?0100 allele_2_Asplenium_boreale_018 1001?10 allele_a_MLG1_N 0011?10 allele_a_MLG1_O 0011?11 allele_a_MLG2_N 0011?10 allele_a_MLG3_N 0011?10 allele_a_MLG5_N 0011?10 allele_a_MLG5_O 0011?11 allele_a_MLG6_N 0011?10 allele_a_MLG7_O 0011?11 allele_a_MLG8_N 0011?10 allele_b_MLG2_O 0011?10 allele_b_MLG7_N 0011?10 allele_c_MLG4_O 0011?10 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M41994] TITLE Asplenium_NIA; LINK TAXA = TaxaForAnalysisStep21301; DIMENSIONS NCHAR=388; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Asplenium_boreale_Allele_1_018 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGAGCTGAGAGTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_boreale_Taiwan_368 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGA?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACA??CTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Allele_a_MLG3_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGA?????AGTAGAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACA??CTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Allele_a_MLG4_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Allele_b_MLG6_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Allele_b_MLG8_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Taiwan_360 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Taiwan_369_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Taiwan_369_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGG?????AGTAAAAAATGAGCAATAAGCATAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Taiwan_373 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Taiwan_378 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_normale_Taiwan_384 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_oligophlebium_var_iezimaense_342 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_oligophlebium_var_oligophlebium_029 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_oligophlebium_var_oligophlebium_153 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_oligophlebium_var_oligophlebium_164 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_shimurae_Alele_1_085 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_shimurae_Allele_2_085 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTTCCATACTTGGTTGGTCGTTCAGGATGAAAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAATGAGCTGATCAAGTGCGGA???????GTACACGTTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTTCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG Asplenium_trichomanes_066 AAGCTCCATGACTTCGACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATGTTTGGTTGGTCGCTCGGGGTGAGAGAGCCTACATAACCTCCAACTCTCCCCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCGCCTGTATGTACACG??????AGTTACATACGAGCAATAAGCACAGTTCAGTCCCCACGCGGAATGAGCTAATCAAGTTCAGAT??????TTACACATTGCAACGCCAATCTTTTTGCAAGACACGCCACAATGCATGCACTC?AGATGCAAGTGTTACCTGAATACGCGTATCCTTTCAGAGCGTAGGGAACTTGCAAGGTGGTTACACTAATGGGTATAACTTCATCATGTGCTGG allele_2_Asplenium_boreale_018 AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACA?CAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGGCCCGCAGTAAAAAATGAACAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG1_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG1_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGA?????AGTAGAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACA??CTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG2_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG3_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG5_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG5_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGA?????AGTAGAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACA??CTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG6_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG7_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGA?????AGTAGAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACA??CTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_a_MLG8_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_b_MLG2_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCAGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_b_MLG7_N AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTAGTCGTTCAGGGTGAAAGAGCCTGCATAACCTCCAAGTCTCACCCCCATCAATAGTAACCTCCACTCGGGTAACCTTCCTTCCACCACCTGTACATACGGGG?????AGTTAAAAATGAGCAATAAGCACAGTTCAATCCTCATGTGGAACGAGCTGATCAAGTGCGGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTT?TGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG allele_c_MLG4_O AAGCTCCATGACTTCCACATCAAGCTCCCAGAAACACCAGCACCAATATTTGCCATACTTGGTTGGTCGTTCAGGGTGAGAGAGCCTACATAACCTCCAAGTCTCACCCCCATCAATAGTGATCTCCACACGGGTAACCTTCCTTCCACCACCTGTACATACAGGG?????AGTAAAAAATGAGCAATAAGCACAGTTCAATCCTCATGCGGAACGAGCTGATCAAGTGCAGA???????GTACACATTGCAACGC????CTGTTTGCAAGACACACTGCAATGCATGTACTC?AGATGCAAGTTTTACCTGAATACGCGTATCCTTTCAGTGCGTAAGGAACTTGCAAGGTGGTTACAGTGATGGGTATAACTTCATCATGTGCTGG ; END; [ The following blocks are output data for analysis step 21301 ] BEGIN TREES; TITLE Asplenium_NIA_BI; LINK TAXA = TaxaForAnalysisStep21301; TREE con_50_majrule = [&R] (((((allele_a_MLG1_N:8.939575E-4,allele_a_MLG2_N:9.075837E-4,allele_a_MLG3_N:9.30103E-4,Asplenium_normale_Allele_a_MLG4_N:9.02084E-4,allele_a_MLG5_N:8.997788E-4,allele_a_MLG6_N:9.093605E-4,allele_b_MLG7_N:0.002155024,allele_a_MLG8_N:9.306697E-4,Asplenium_normale_Taiwan_369_N:8.952582E-4,Asplenium_normale_Taiwan_360:8.852217E-4,Asplenium_normale_Taiwan_373:9.107205E-4,Asplenium_normale_Taiwan_378:8.825703E-4,Asplenium_normale_Taiwan_384:8.669712E-4):0.002214957,Asplenium_shimurae_Alele_1_085:9.579205E-4):0.002184554,Asplenium_shimurae_Allele_2_085:0.007506409):0.007063971,((allele_b_MLG2_O:8.77578E-4,Asplenium_normale_Allele_b_MLG6_O:8.705134E-4,Asplenium_normale_Allele_b_MLG8_O:9.043465E-4,Asplenium_oligophlebium_var_oligophlebium_029:9.291458E-4,Asplenium_oligophlebium_var_oligophlebium_153:9.163228E-4,Asplenium_oligophlebium_var_oligophlebium_164:8.837804E-4,Asplenium_oligophlebium_var_iezimaense_342:9.396186E-4):0.003022911,Asplenium_normale_Taiwan_369_O:0.002171075,Asplenium_boreale_Allele_1_018:0.002184425,allele_2_Asplenium_boreale_018:0.004857825,allele_c_MLG4_O:8.924954E-4,(Asplenium_boreale_Taiwan_368:9.621227E-4,(allele_a_MLG1_O:9.304519E-4,Asplenium_normale_Allele_a_MLG3_O:9.211869E-4,allele_a_MLG5_O:8.757364E-4,allele_a_MLG7_O:9.056648E-4):0.00218018):0.003432785):0.00659941):0.024953775,Asplenium_trichomanes_066:0.024953775); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr105916] END;