#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 17, 2025; 17:26 GMT TreeBASE (cc) 1994-2008 Study reference: Mohd noor N., & Zakaria L. 2017. Characterization and Pathogenicity of Colletotrichum spp. Associated With Chilli Anthracnose (Capsicum Annuum And C. Frutescens) In Peninsular Malaysia. European Journal of Plant Pathology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S20997] [ The following blocks are input data for analysis step 21737 ] BEGIN TAXA; TITLE TaxaForAnalysisStep21737; DIMENSIONS NTAX=58; TAXLABELS 'Colletotrichum curcumae IMI_288937' Colletotrichum_sp._CHK1 Colletotrichum_sp._CHK2 Colletotrichum_sp._CHKH3 Colletotrichum_sp._CHKH4 Colletotrichum_sp._CHPG1 Colletotrichum_sp._CHT1 Colletotrichum_sp._CHT2 Colletotrichum_sp._CMK1 Colletotrichum_sp._CMK10 Colletotrichum_sp._CMK12 Colletotrichum_sp._CMK14 Colletotrichum_sp._CMK15 Colletotrichum_sp._CMK18 Colletotrichum_sp._CMK2 Colletotrichum_sp._CMK28 Colletotrichum_sp._CMK3 Colletotrichum_sp._CMK31 Colletotrichum_sp._CMK4 Colletotrichum_sp._CMK5 Colletotrichum_sp._CMK7 Colletotrichum_sp._CMK9 Colletotrichum_sp._CMP10 Colletotrichum_sp._CMP11 Colletotrichum_sp._CMP2 Colletotrichum_sp._CMP6 Colletotrichum_sp._CMP7 Colletotrichum_sp._CMP9 Colletotrichum_sp._CMT1 Colletotrichum_sp._CMT2 Colletotrichum_sp._CMT3 Colletotrichum_sp._CMT4 Colletotrichum_sp._CMT5 Colletotrichum_sp._CMT7 Colletotrichum_sp._PHK1 Colletotrichum_sp._PHK2 Colletotrichum_sp._PHL3 Colletotrichum_sp._PHPG14 Colletotrichum_sp._PHPG17 Colletotrichum_sp._PHPG8 Colletotrichum_sp._PHT2 Colletotrichum_sp._PMPG1 Colletotrichum_sp._PMPG10 Colletotrichum_sp._PMPG13 Colletotrichum_sp._PMPG14 Colletotrichum_sp._PMPG15 Colletotrichum_sp._PMPG16 Colletotrichum_sp._PMPG2 Colletotrichum_sp._PMPG21 Colletotrichum_sp._PMPG22 Colletotrichum_sp._PMPG3 Colletotrichum_sp._PMPG4 Colletotrichum_sp._PMPG7 Colletotrichum_sp._PMPG8 Colletotrichum_sp._PMT2 'Colletotrichum truncatum CBS_15135' 'Colletotrichum truncatum Capsicum_annuum_CBS_37167' 'Colletotrichum truncatum Capsicum_frutescens_CBS_120709' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M42828] TITLE Colletotrichum_truncatum_Multigene; LINK TAXA = TaxaForAnalysisStep21737; DIMENSIONS NCHAR=100; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100] [ . . . . . . . . . .] 'Colletotrichum curcumae IMI_288937' TGAAATTCAACGAATGACACCACTAGATCACAATTATTAAGATTTCCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHK1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHK2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHKH3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHKH4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHPG1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHT1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK10 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK12 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK14 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK15 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK18 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK28 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK31 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK5 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK9 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP10 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP11 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP6 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP9 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT5 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHK1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHK2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHL3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHPG14 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHPG17 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHPG8 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG10 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG13 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG14 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG15 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG16 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG21 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG22 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG8 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC 'Colletotrichum truncatum CBS_15135' TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGATGAAGCTCTTCGCCC 'Colletotrichum truncatum Capsicum_annuum_CBS_37167' TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC 'Colletotrichum truncatum Capsicum_frutescens_CBS_120709' TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC ; END; [ The following blocks are output data for analysis step 21737 ] BEGIN TREES; TITLE Colletotrichum_truncatum_Multigene; LINK TAXA = TaxaForAnalysisStep21737; TREE tree_1 = [&R] ('Colletotrichum curcumae IMI_288937':0.039579,(((Colletotrichum_sp._CMK10:0.0,(Colletotrichum_sp._CMK15:0.0,Colletotrichum_sp._CMK31:0.0):0.0):0.0,((Colletotrichum_sp._CMK2:0.0,(Colletotrichum_sp._CMK3:0.0,(Colletotrichum_sp._CMK4:0.0,(Colletotrichum_sp._CMK5:0.0,(Colletotrichum_sp._CMK7:0.0,(Colletotrichum_sp._CMK12:0.0,Colletotrichum_sp._CMK18:0.0):0.0):0.0):0.0):0.0):0.0):0.0,(Colletotrichum_sp._CHK1:0.0,(Colletotrichum_sp._CHK2:0.0,(Colletotrichum_sp._CHT1:0.0,(Colletotrichum_sp._CHT2:0.0,(Colletotrichum_sp._CMT1:0.0,(Colletotrichum_sp._CMT2:0.0,(Colletotrichum_sp._CMT3:0.0,(Colletotrichum_sp._CMT5:0.0,Colletotrichum_sp._CMT7:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):9.94E-4):0.00199,(((Colletotrichum_sp._CHPG1:0.0,(Colletotrichum_sp._CHKH3:0.0,(Colletotrichum_sp._CHKH4:0.0,(Colletotrichum_sp._CMK1:0.0,(Colletotrichum_sp._CMK28:0.0,'Colletotrichum truncatum Capsicum_annuum_CBS_37167':0.0):0.0):0.0):0.0):0.0):0.0,((Colletotrichum_sp._PHK1:0.0,Colletotrichum_sp._PHK2:0.0):9.94E-4,(Colletotrichum_sp._CMK9:0.0,(Colletotrichum_sp._CMK14:0.0,(Colletotrichum_sp._CMP2:0.0,(Colletotrichum_sp._PHPG14:0.0,(Colletotrichum_sp._PHPG17:0.0,(Colletotrichum_sp._PHL3:0.0,Colletotrichum_sp._PHPG8:0.0):0.0):0.0):0.0):0.0):0.0):9.94E-4):0.0):9.94E-4,('Colletotrichum truncatum CBS_15135':0.001988,(('Colletotrichum truncatum Capsicum_frutescens_CBS_120709':9.94E-4,(Colletotrichum_sp._CMP6:0.0,(Colletotrichum_sp._CMP7:0.0,(Colletotrichum_sp._CMP9:0.0,(Colletotrichum_sp._CMP10:0.0,Colletotrichum_sp._CMP11:0.0):0.0):0.0):0.0):0.0):9.94E-4,((Colletotrichum_sp._CMT4:0.0,(Colletotrichum_sp._PMPG7:0.0,Colletotrichum_sp._PMPG8:0.0):0.0):0.0,((Colletotrichum_sp._PMPG14:0.00199,Colletotrichum_sp._PMT2:0.0):0.0,(Colletotrichum_sp._PHT2:0.0,(Colletotrichum_sp._PMPG1:0.0,(Colletotrichum_sp._PMPG2:0.0,(Colletotrichum_sp._PMPG3:0.0,(Colletotrichum_sp._PMPG4:0.0,(Colletotrichum_sp._PMPG10:0.0,(Colletotrichum_sp._PMPG13:0.0,(Colletotrichum_sp._PMPG15:0.0,(Colletotrichum_sp._PMPG16:0.0,(Colletotrichum_sp._PMPG21:0.0,Colletotrichum_sp._PMPG22:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):9.94E-4):0.0):0.002984):0.0):0.0):0.039579); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr107251] END;