#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 02, 2024; 18:15 GMT

TreeBASE (cc) 1994-2008

Study reference:
Abliz P., Horie Y., Yaguchi T., Kasim K., Gonoi T., & Matsuzawa T. 2017. Two new
black Aspergillus isolated from clinical material of human in Xinjang, China. Mycoscience,
.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S21046]

[ The following blocks are input data for analysis step 21756 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep21756;
        DIMENSIONS NTAX=17;
        TAXLABELS
            'Aspergillus brasiliensis CBS_101740T'
            'Aspergillus costaricaensis CBS_115574T'
            'Aspergillus eucalypticola CBS_122712T'
            'Aspergillus flavus NRRL_1957T'
            'Aspergillus foetidus CBS_121.28'
            'Aspergillus lacticoffeatus CBS_101883T'
            'Aspergillus luchuensis KACC_46772T'
            'Aspergillus neoniger CBS_115656T'
            'Aspergillus niger CBS_554.65T'
            'Aspergillus piperis CBS_112811T'
            'Aspergillus pulverulentus CBS_558.65T'
            'Aspergillus tarimuensis IFM_64239T'
            'Aspergillus tarimuensis IFM_64240'
            'Aspergillus tianshanensis IFM_64241T'
            'Aspergillus tubingensis CBS_134.48T'
            'Aspergillus vadensis CBS_113365T'
            'Aspergillus welwitschiae CBS_139.54T'
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M42879]

	TITLE Aspergillus_isolated_from_clinical_material_BT;
	LINK TAXA = TaxaForAnalysisStep21756;
	DIMENSIONS NCHAR=368;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                  10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360        ]
[                                                   .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .        ]
'Aspergillus brasiliensis CBS_101740T'     CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAACTTTTTTCACACCTCT---------CAATTGGTCAACAATGGGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTTTACTTC-AACGAGGTGAGATC-CATCGGTCCTTGG-TTTT-----GGTACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTTCCTCGTGCCGTCCTCGTTGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus costaricaensis CBS_115574T'   CATCTCTGGCGAAGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGGATTGGGTTTCCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGTCCCGACAACTTCG-TCTTC-
'Aspergillus eucalypticola CBS_122712T'    CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGGATTGGGTATTCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTACCTGAGTTTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGTCCCGACAACTTCG-TCTTC-
'Aspergillus flavus NRRL_1957T'            CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAGC-CTGTATACACCTCGAACGAACGACGACCATATGGCATTAGAAGTTGGAATGGAT---CTGACGGCAAGGATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGTATGAACGTCTACTTC-AACGAGGTG---------CGTACCTCAAAATTTCAGCATCTATGAAAACGCTTTGCAACTCCTGACCGCTTCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTTGATCTTGAGCCTGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAGCTCTTCCGTCCCGACAACTTCG-TTTTC-
'Aspergillus foetidus CBS_121.28'          CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGGGCAAAGGGTTGGGTCTTCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTGAGATC-CATCGGACCTTGG-CTTT-----TTCACGACAATATCATCAATGTCCTAATCACTTCAGCAGGCTAGCGGTAACAAGTATGTTCCTCGTGCCGTCCTCGTCGACCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus lacticoffeatus CBS_101883T'   CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGGGCAAAGGGTTGGGTCTTCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTGAGATC-CATCGGACCTTGG-CTTT-----TTCACGACAATATCATCAATGTCCTAATCACTTCAGCAGGCTAGCGGTAACAAGTATGTTCCTCGTGCCGTCCTCGTCGACCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus luchuensis KACC_46772T'       CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCGACAATGTGGAAAGGATTGGGTTTCCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGTCCCGACAACTTCG-TCTTC-
'Aspergillus neoniger CBS_115656T'         CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAGTTTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus niger CBS_554.65T'            CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGGGCAAAGGGTTGGGTCTTCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTGAGATC-CATCGGACCTTGG-CTTT-----TTCACGACAATATCATCAATGTCCTAATCACTTCAGCAGGCTAGCGGTAACAAGTATGTTCCTCGTGCCGTCCTCGTCGACCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus piperis CBS_112811T'          CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGAATTGGGTTTCCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTCAAACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTTACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGTCCCGACAACTTCG-TCTTC-
'Aspergillus pulverulentus CBS_558.65T'    CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus tarimuensis IFM_64239T'       CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAAC-TTTTTCACACCTCT---------CAATTGGTCATCAATGTGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTTTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus tarimuensis IFM_64240'        CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAAC-TTTTTCACACCTCT---------CAATTGGTCATCAATGTGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTTTTCCGCCCCGACAACTTCGTTCTTC-
'Aspergillus tianshanensis IFM_64241T'     CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGGGCAAAGGGTTGGGTCTTCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTGAGATC-CATCGGACCTTGG-CTTT-----TTCACGACAATATCATCAATGTCCTAATCACTTCAGCAGGCTAGCGGTAACAAGTATGTTCCTCGTGCCGTCCTCGTCGACCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus tubingensis CBS_134.48T'      CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TTCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus vadensis CBS_113365T'         CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGTGGAAAGGATTGGGTTTCCTGACGCGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTTAGATCACACCGTCCCTGAG-TTTT-----TCCACGACAATATCATCAATGTCCTGACCACTTCAGCAGGCTAGCGGTAACAAGTATGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGCCAGCTTTTCCGCCCCGACAACTTCG-TCTTC-
'Aspergillus welwitschiae CBS_139.54T'     CATCTCTGGCG-AGCACGGCCTTGACGGCTCCGGTGTGTAAGTGCAAC-TTTTTCACACCTCT---------CAATTGGTCAACAATGGGCAAAGGGTTGGGTCTTCTGACACGCAGGATAGTTACAATGGCACCTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTC-AACGAGGTGAGATC-CATCGGACCTTTG-CTTT-----TACACGACAATATCATCAATGTCCTAATCACTTCAGCAGGCTAGCGGTAACAAGTATGTTCCTCGTGCCGTCCTCGTCGACCTCGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCTTTCGGCCAGCTCTTCCGCCCCGACAACTTCG-TCTTC-
;
END;

[ The following blocks are output data for analysis step 21756 ]
BEGIN TREES;
      TITLE Aspergillus_isolated_from_clinical_material_BT;
      LINK TAXA = TaxaForAnalysisStep21756;
      TREE 'PAUP_1' = [&R] ('Aspergillus flavus NRRL_1957T':0.185996,(('Aspergillus brasiliensis CBS_101740T':0.016361,('Aspergillus welwitschiae CBS_139.54T':0.005976,('Aspergillus tianshanensis IFM_64241T':0.0,('Aspergillus niger CBS_554.65T':0.0,('Aspergillus foetidus CBS_121.28':0.0,'Aspergillus lacticoffeatus CBS_101883T':0.0):0.0):0.0):0.0):0.032536):0.009134,(('Aspergillus eucalypticola CBS_122712T':0.008889,('Aspergillus costaricaensis CBS_115574T':0.0,('Aspergillus luchuensis KACC_46772T':0.00293,'Aspergillus piperis CBS_112811T':0.005885):0.002935):0.0):0.005815,('Aspergillus vadensis CBS_113365T':0.005888,(('Aspergillus tarimuensis IFM_64239T':0.0,'Aspergillus tarimuensis IFM_64240':0.0):0.005902,('Aspergillus pulverulentus CBS_558.65T':0.0,('Aspergillus neoniger CBS_115656T':0.0,'Aspergillus tubingensis CBS_134.48T':0.0):0.0):0.0):0.002907):0.0):0.023857):0.185996);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr107287]


END;