#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 2:22 GMT TreeBASE (cc) 1994-2008 Study reference: Simpson B., Tate J., & Weeks A. 2004. On the value of the genus Hoffmannseggia (Caesalpinieae: Caesalpiniodeae: Leguminosae): Phylogeny and character evolution. Systematic Botany, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1217] [ The following blocks are input data for analysis step 2202 ] BEGIN TAXA; TITLE TaxaForAnalysisStep2202; DIMENSIONS NTAX=54; TAXLABELS Balsamocarpon_brevifolia Caesalpinia_pumilio Hoffmannseggia_arequipensis_H15 Hoffmannseggia_arequipensis_H16 Hoffmannseggia_doelli Hoffmannseggia_drepanocarpa Hoffmannseggia_drummondii Hoffmannseggia_erecta Hoffmannseggia_erecta_x_trifoliata_H6.clone1 Hoffmannseggia_erecta_x_trifoliata_H6.clone10B Hoffmannseggia_erecta_x_trifoliata_H6.clone2 Hoffmannseggia_erecta_x_trifoliata_H6.clone3 Hoffmannseggia_erecta_x_trifoliata_H6.clone3B Hoffmannseggia_erecta_x_trifoliata_H6.clone4B Hoffmannseggia_erecta_x_trifoliata_H6.clone5B Hoffmannseggia_erecta_x_trifoliata_H6.clone6B Hoffmannseggia_erecta_x_trifoliata_H6.clone7 Hoffmannseggia_erecta_x_trifoliata_H6.clone9 Hoffmannseggia_eromophila Hoffmannseggia_glauca_176 Hoffmannseggia_glauca_24 Hoffmannseggia_humilis Hoffmannseggia_intricata Hoffmannseggia_microphylla Hoffmannseggia_minor Hoffmannseggia_miranda_100 Hoffmannseggia_miranda_H18 Hoffmannseggia_miranda_H21 Hoffmannseggia_oxycarpa Hoffmannseggia_penninsularis Hoffmannseggia_prostrata Hoffmannseggia_repens Hoffmannseggia_tenella Hoffmannseggia_ternata_97 Hoffmannseggia_ternata_H14 Hoffmannseggia_ternata_H19 Hoffmannseggia_ternata_H20 Hoffmannseggia_ternata_H28 Hoffmannseggia_trifoliata Hoffmannseggia_trifoliata_x_erecta_H5.clone1 Hoffmannseggia_trifoliata_x_erecta_H5.clone1B Hoffmannseggia_trifoliata_x_erecta_H5.clone2B Hoffmannseggia_trifoliata_x_erecta_H5.clone3 Hoffmannseggia_trifoliata_x_erecta_H5.clone4 Hoffmannseggia_trifoliata_x_erecta_H5.clone4B Hoffmannseggia_trifoliata_x_erecta_H5.clone5B Hoffmannseggia_trifoliata_x_erecta_H5.clone6 Hoffmannseggia_trifoliata_x_erecta_H5.clone8B Hoffmannseggia_trifoliata_x_erecta_H5.clone9 Hoffmannseggia_viscosa_170 Hoffmannseggia_viscosa_172 Hoffmannseggia_watsonii Hoffmannseggia_yaviensis Zuccagnia_punctata ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1277] TITLE 'ITS, with clones'; LINK TAXA = TaxaForAnalysisStep2202; DIMENSIONS NCHAR=657; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] Balsamocarpon_brevifolia TGCGGAAGGATCATTGT{CT}GTTGCCTCTAAAA-CAGAACAACTCGCGAATTTGTTTT--GCTCCATCCTCGGGG-AGGC-GGAGGTG---CTAGTCGCCCTCGCTTCCCCTGTTGGCAGGAGTGCTTGTTGCCTTGTGCAGCACGTGCCTTGCT-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTTGATGAACTAGCAT-GCCCACGACAG--CCCGGAAACGGTGCAGGTCGGGGAGCATTGCGAGAATTGTGTAC----ATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGCTATGGG-----CTGGGCGGATCATGGCCTCCCGTGAGCTTTGTGCTGCGGCTGGCCTAAAAAAT-GAGTCCTC-GGTGGCGATTGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGAC--GTGCGCGTTTCGTCCCATGGTTAGGCTCT--AAGACCCTTT-GTGTCGCCTTGCGCGACCACATATCCAACGCGACCCC Caesalpinia_pumilio TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CACAACAACCCGCGAA{CT}C{CG}TCTCT--G{CG}CCTACCCG{AC}GGGG-AGCT-GTCGGCG---CCT{AC}GCGCCCTCA{GT}ATCCCCCGTCGGCAGGAGCGCCCGTTGCCTCGAGCAGCGCATGCCCTG{CT}C-GACACAACCAA--CCCGGGCGCCCTGCGCCAAGGAAA-TTCGATCAATAAGCAT-GCCCA{CT}GGCGG--CCCGGGAACGGTGCCCG-CCTGGAGCAATGCAAGAGCAGCGTAT--GTATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACC{AC}T{CT}GAGTCTTTG{AC}ACGC{AC}AGTTGC{AC}CCCG{AGT}AGCC{AC}TT{AT}GGCCGAGGGC{AC}CGT{CT}TGCCTGGGTGTCACACATCGTTGCCCCTCCC{CT}GAGAC{CG}{GT}G-----ACGGGC{CG}GAGGATGGCCTCCCGTGAGCCTTGTGCTGCGG{CT}{GT}GGC{ACG}{ACG}AAAAAGC-GAGTCCT{CT}-GGCGGCGATCGCCACGCTCCTCGG{GT}GGATGAGTACAGCTCGATAC{CG}GGA{CG}--GTGCGCGCCTCGTCCCGCGATCGGGCTCG--AAGACCC-----------CTTGCGCGCACGCGCATCCAACGCGACCCC Hoffmannseggia_arequipensis_H15 TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTACCAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTCGGCAAGTGTGCCAGTTGCCTCGAGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGGAACGCGCTT-GCCCTCGGCAG--CTCGGGAACGGCGCTTGTCGGGGAGCAATGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGTGACGGG-----ATTGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGCGGCAATCGCCACGCTCCTCGGTGGATGAGCGCTGCTCGATGCCGGAC--GTGCGCGTGTTGTCACTTGGTTGGGACTT-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_arequipensis_H16 TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTACCAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTCGGCAAGTGTGCCAGTTGCCTCGAGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGGAACGCGCTT-GCCCTCGGCAG--CTCGGGAACGGCGCTTGTCGGGGAGCAATGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGTGACGGG-----ATTGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGCGGCAATCGCCACGCTCCTCGGTGGATGAGCGCTGCTCGATGCCGGAC--GTGCGCGTGTTGTCACTTGGTTGGGACTT-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_doelli TGCGGAAGGATCATTGTCGTTGCTATCAGAA-CGTATCAACTCGCGAACCGTTTTATTGCCAAACCCCTGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCTGTTGGCAAGTGCCCCGGTAGCGTCGTGCTGCTTGTGCCTTGTC-GACACAACTAA--CTCGGGCGCCTTGCGCCAAGGAAT-TTCGAGAAACTTGCTT-GCCCTCGGCAG--CCCGGAAACGGTGCCTGTTGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCTCCCCGACGGG-----ATGGGCAGAGGATGGCCTCGCGCGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAAACGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTTTTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTCGAGCGTCCTTCCTTCTAGCGCGACCCC Hoffmannseggia_drepanocarpa TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTAACAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTCCCTCGACTTCTCCGTTGGCAAGTGCGCCGGTTGCCTCGCGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACGTGCTTTGCCCGCGGCAG--CCCGGGAACGGCGCTTGCCGGGGAGCATTGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTCTAGGCCAAGGGCACGTCTGCCTGGGTGTCTCACAACGTTGCCCCTCCCTGCGACGGG-----ACGGGTAGAGGATGGCCTCCCGTGAGCCGCGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTG-GGTGGCAGTCGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATGCCGGAC--GTGCGCGTGTTGTCACCCGGTTGGGCCTT-GACGACCCTTTCGCGGCGCCTTGTGCGTCGTCACTTCCAGCGCGACCCC Hoffmannseggia_drummondii TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CAACACAACCCGCGAACCGTCTCT--GCCCCACCC-------------------------------------------GTCGGCAGGAGCGCCCGTTGCCTCGAGTAGCGCGTGCCTTGCT-GACACAACCAA--CACGGGCGCCCTGCGCCAAGGAAA-TTCGACAAACACGCGT-GTCCACGGCGG--CCCGGGAACGGTGCCCGACCTGGAGCATTGCAAGAGCTGTGTAC--GTATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATCAGGCCGAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ACGGGCGGAGGATGGCCTCCCGTGAGCCTCGCGCTGCGGCTGGCCGAAAAAGC-GAGTCCTC-GGCGGCGATCGCCACGCTCCTCGGTGGATGAGCACAACTCGATACCGGAC--GTGCGCGCGTCGTCCCGCGGTCGGGCTCG-GAGATCCC------------TTGTGCGCACGCGCATCCAACGCGACCCC Hoffmannseggia_erecta TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCG{CT}GCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone1 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAC-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGGTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCTT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone10B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAATTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone2 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGATGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCATGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone3 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTACCTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGTGAAATGCGATACTTGGTGTGAATTGCAGAATCCCATGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone3B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCC-GGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTGGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTGT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone4B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone5B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCGTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone6B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCACGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone7 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_erecta_x_trifoliata_H6.clone9 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_eromophila TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CGTAACAACTCGCGAATCGTTTTT--GCCACACCCTCGGGG-AGGC-GGGGGAG---CTCTGCTTCCTCGATTCCCCCGTTGGCAAGTGCGCTAGTTGCCTCGCGCAGCGCGTGCCTTGTC-GACACAACAAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACACGCGT-GCCCACGGCAG--CCCGCGAGCGGCGCTTGTCGGGGAGCATTGCGAGAATGGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTAAAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTACCTGCGACGGG-----ATGGGCAGATGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCTAAAAAAT-GAGTCCTA-GGTGGCAATCGCCACGGTCCTCGGTGGATGAGCACTGCTCGATACCGGAC--GTGCGTGTGTTGTCACTTGGCTGGGCCCT-GAAGACCCTTT-GCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_glauca_176 TGCGGAAGGATCATTGTCGTTGCCCTCAGAA-AGAATCATTTTGCGAATTGTTGTTT-GCCACATTCCTTGGG-AGGC-GGTGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCTAGTTGCCACGATCAGCTCGTGCCTTGTC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGTGAAACATGCTT-GCTCGCGGCAG--CCCGGAAACGGTGCATGTCGGGGAGCATTGCGAGAATAGTGTATACATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGTGATGGGG----ATGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAACAC-GAGTCCTA-GGTGGCAATCGCCATGCTCCTCGGTGGATGAGCAGCGCTCGATACCGGACATGTGTGTGTATTGTCAGTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGTGTGCCCACGCTTCTAGCGTGACCCC Hoffmannseggia_glauca_24 TGCGGAAGGATCATTGTCGTTGCCCT{CT}AGAA-AGAATCATTTTGCGAATTGTTGTTT-GCCACATTCCTTGGG-AGGC-GGTGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCTAGTTGCCACGATCAGCTCGTGCCTTGTC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGTGAAACATGCTT-GCTCGCGGCAG--CCCGGAAACGGTGCATGTCGGGGAGCATTGCGAGAATAGTGTATACATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCCCCCTGTGATGGGG----ATGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAACAT-GAGTCCTA-GGTGGCAATCGCCATGCTCCTCGGTGGATGAGCAGCGCTCGATACCGGACATGTGTGTGTATTGTCAGTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGTGTGCCCACGCTTCTAGCGTGACCCC Hoffmannseggia_humilis TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTAACAACTCGCGAATTGTTTATT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTCTGCTTCCTCGACGTCTCCGTCGGCAAGTGCGCCGGTCGCCTCGCGCAGCGCTTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCCAGAAACGTGCCT-GCCCGCGGCAG--CCCGGGAACGGCGCTTGCCGGGGAGGAATGCGAGACCAGTGTAC--ACAGAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTCTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGCGACGGGG----ATGGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGTGGCAATCGCCATGATCCTCGGTGGATGAGCGCCGCTCGATGCCGGAG--GTGCGCGCGTTGTCACTCGGTTGGGGCTT-GAAGACCCTTTTGCGGCGCCTTGCGCGTCCTCGCTTCCAGCGCGACCCC Hoffmannseggia_intricata TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATAACAACCGGCGAATCGTATCT--GCTCCACCGTTGGGG-AGCC-GACGGTG---CTATGCGCCCTCGGACCCCTTGTTGGCAAGAGTACTTGCTGCCTCGAGCAGCACGTGCCCTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACATGCGT-GCCCACGGCAT--CCCGGGAACGGCGCTTGTCGGTGAGCATTGCAAGAGTTGCGTAA--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCAGAGACGGAATGGGATGGGCGGAGGATGGCCTCCCGTGAGCCTCGCGTTGCGGCTGGCCGAAAAAAT-GAGTCAAC-GGTGGCAGTGGCCACGCTCCTCGGTGGACGAGTACTACTCGATACCGGAC--GTGGCCGTGCAGCCCCGTGGGATTGCTCC--GAGACCCTCT-GCGACGCCTTGTGCGCAGTCACATCCAACGCGACCCC Hoffmannseggia_microphylla TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATAACAACCGGCGAATCGTATCT--GCCCTACCGTTGGGG-AGTC-GGCGGTG---CTATGCGCCCTCGGAGCCCTCGTTGGCAAGAGTACTTGCTGCCTCGAGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TT?GAGAAACATGCGT-GCCTACGGCAT--CCCGGGAACGGTGCTTGTCGGTGAGCATTGCAAGAGTTGCGTAA--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCAGAGACGGG-----ATGGGCGGAGGATGGCCTCCCGTGAGCCTTGCGTTGCGGCTGGTCGAAAAAAATGAGTCAAC-GGTGGCAGTGGCCGCGCTCCTCGGTGGATGAGTACGACTCGATACCGGAC--GTGGCCGTGTAACCCCGTGGGATTGCTCC--GAGACCCTCT-GTGACGCCTTGTGTGCAGTCACATCCAACGCGACCCC Hoffmannseggia_minor TGCGGAAGGATCATTGTCGTTGCCATAAGAA-CGTATCAACTCGCGAACTGTTTTTT-GCCTCACCCC-GGGG-AGGC-GGGGGAG---CTTTGCTTCCTCGTTTTCCCTGTTGGCGAGTGCGCCGGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACGAA--CTCGGGCGCTATGCGCCAAGGAAT-TTCGAGAAACATGCTA-GCCCACGGCAG--CCCAGAAACGGTGCCTGTCCGGGGGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCGAAGGGCACGTCTGTCTGGGCGTCACACGTCGTTGCCCCTCCCCCTGTCGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCACGCGCTGCGGCTGGCCAAAAAAT--GAGTCCTA-GGTGGCAATCGCCACGCTCCTCGGTGGATGAGCGTCGCTCGGTACCGGAC--GTGCGTGTATTGTCACCAGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGTGCGTCCTTGCTTCTAGCGCGACCCC Hoffmannseggia_miranda_100 TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTACCAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTCGGCAAGTGTGCCAGTTGCCTCGAGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGGAACGCGCTT-GCCCTCGGCAG--CTCGGGAACGGCGCTTGTCGGGGAGCAATGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGTGACGGG-----ATTGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGCGGCAATCGCCACGCTCCTCGGTGGATGAGCGCTGCTCGATGCCGGAC--GTGCGCGTGTTGTCACTTGGTTGGGACTT-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_miranda_H18 TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTACCAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTCGGCAAGTGTGCCAGTTGCCTCGAGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGGAACGTGCTT-GCCCTCGGCAG--CTCGGGAACGGCGCTTGTCGGGGAGCAATGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCC{AG}AGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGTGACGGG-----ATGGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGTGGCAATCGCCACGCTCCTCGGTGGATGAGCGCTGCTCGATGCCGGAC--GTGCGCGTGTTGTCACTTGGTTGGGACTT-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_miranda_H21 TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTACCAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTCGGCAAGTGTGCCA{AG}TTGCCTCGAGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGGAACGTGCTT-GCCCTCGGCAG--CTCGGGAACGGCGCTTGTCGGGGAGCAATGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCA{CT}GTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGTG{AT}CGGG-----ATGGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGCGGCAATCGCCACGCTCCTCGGTGGATGAGCGCTGCTCGATGCCGGAC--GTGCGCGTGTTGTCACTTGGTTGGGACTT-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_oxycarpa TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTAACAACCCGCGAATTGTTTGTT-GTCACACCCTTGGGGGAGGC-GGCGGGG---CTTCGCTTCGTCGACTTCTCCGTTGGCAAGGGCGCCGGTTGCCTCGCGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACGTGCTTTGCCCGCGGCAG--CCCGGGAACGGCGCTTGCCGGGGAGCATTGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACG{CT}AGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTCTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACAACGTTGCCCCTCCCTGCGACGGG-----ACGGGTGGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGTCGAAAAATC-GAGTCTTAAGGTGGCAATCGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATGCCGGAC--GTGCGCGTGCTGTCACTTGGTTGGGGCTTTGACGACCCTTTTGCGGCGCCTCGTGCGTCCTCACTCCCAGCGCGACCCC Hoffmannseggia_penninsularis TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATAACAACCGGCGAATCGTATCT--GCTCTACCGTTGGGG-AGGC-GGCGGCG---CTATGCGCCCTCGGACCCCTTGTTGGCAGGAGTACTTGCTGCGTCGAGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACATGCGT-GCCCACGGCAT--CCCGGGAACGGTGCTTGTCGGGGAGCATTGCAAGAGTTGTGTAA--ATGTAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTG{AG}TGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCTAGAGACGGG-----ATGGGCGGAGGATGGCCTCCCGTGAGCCTTGCGTCGCGGCTGGCCGAAAAAAATGAGTCAAC-GGTGGCAATGGCCACACTCCTCGGTGGATGAGTACAACTCGATACCGGAC--GTGCGCGTGTTGCCCCGTGGGATTGCTCC--GAGACCCTTT-GCGACGCGCTGTGCGCAGTCACATCCAACGCGACCCC Hoffmannseggia_prostrata TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTAACAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGG--GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTCGGCAAGTGCGCCAGTTGCCTCGCGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACGTGCTT-GCCCGCGGCAG--CCCGGGAACGGCGCTTGCCGAGGAGCATTGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGCGACGGG-----ATGGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATT-GAGTCCTA-GGTGGCAATCGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGCGTGTTGTCACTTGGTTGGGACTT-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Hoffmannseggia_repens TGCGGAAGGATCATTGCCGTTGCCTTCAAAAACGTAACAACTCGCGAATTGCTTTTT-GTCACACCCTTGGGG-AGGCGGGCGGGG---CTTTGCTTCCTCGACTTCTCCGTTGGCAAGTGCGTCGGTTGCCTCGCGCAGCGGGTGCCTTGCC-GACACAACTGA--CCCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACGTGCTTTGCCCGCGGCAG--CCCGGGAACGGCGCCTGCCGGGGAGCATTGCGGGAACAGTGTGC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTCTAGGCCAAGGGCACGTCTGCCTGGGTGTCTCACAACGTTGCCCCTCCCCGCGACGGG-----ACGGGTAGAGGATGGCCTCCCGTGAGCCGCG{AT}GCCGCGGCTGGCCGAAAAATC-GAGTCCTG-GGTGGCAATCGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATGCCGGAC--GTGCGCGTGTTGTCACTCGGTTGGGCCTC-GACGACCCTTTTGCGGCGCCTTGTGCGCCCTCACTTCCAGCGCGACCCC Hoffmannseggia_tenella TGCGGAAGGATCATTGCCGATGCCTTCGAAT-CGTAACAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGGGAGGC-GGCGGGG---CTTCGCTTCCTCGTCTTCTCCGTTGGCAAGTGCGCCAGTTGCCTCGCGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACGTGCTT-GCCCACGGCACTGCCCGGGAACGGCCGTCGCCGGGGAGCATTGCGAGAACAGTGTAC--GCACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTCTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACAT-GTTGCCCCTCCCTGCGACGGG-----ACGGGCAGAGGATGGCCTCCCGTGAGCCTCGCGCTGCGGCTGGTCGAAAAATC-GAGTCCTA-GGTGGCAGTCGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGCGTGCTGTCACTCGGTTGGGCCTT-GACGACCCTTTCGCGGCGCCTTGTGCGCCCTCACTTTCGGCGCGACCCC Hoffmannseggia_ternata_97 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGC-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTGGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CCCGGAAACGGTGCTTGTCGGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGTC--GTGCGCGTGTTGTCCCGTGGTCGGGCTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_ternata_H14 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGC-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTTGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CCCGGAAACGGTGCTTGTCGGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGTC--GTGCGCGTGTTGTCCCGAGGTCGGGCTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_ternata_H19 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGT-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTGGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CTCGGAAACGATGCTTGTCCGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAGCTCGATACCGGTC--GTGCGCGTGTTGTCCCGTGGTCGGACTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_ternata_H20 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGC-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTGGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CCCGGAAACGGTGCTTGTCGGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGTC--GTGCGCGTGTTGTCC{CT}GTGGTCGG{AG}CTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_ternata_H28 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGC-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTGGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CCCGGAAACGGTGCTTGTCCGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGTC--GTGCGCGTGTTGTCCCGTGGTCGG{AG}CTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_trifoliata TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTG-CACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone1 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone1B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCGTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTT-CCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone2B TGCGGAAGGATCATTGTCGTTGCCATTAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTAGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone3 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAAATGTTTTTT-GCCACACCCCTGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGGGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone4 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCACCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCACACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAGCGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAAAGGATGGCCTCACGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone4B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone5B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTTTGCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTTTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCGGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCGGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGTGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone6 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCA--CCCCCGGGG-AGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGACGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone8B TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTT-CGCCACACCCCCGGGG-GGGC-GGCGGAG---CTTTGCTTCCTCGATTTCCCTGTTGGCAAGTGCGCCAGTTGCATCGTGCGGCTCGTGCCTTGCC-GACACAACTAA--CTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTT-GCCCACGGCAG--CCCGGAAACGGTGCCTGTCGGGGAGCACAGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGCCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCCGACGGG-----ACGGGCAGAGGATGGCCTCGCGTGAGCCACGTGCTGCGGCTGGCCGAAAAAT--GAGTCCTA-GGTGGCAATTGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGTGTATTGTCACTTGGTTGGGCCCT-GAAGACCCTAT-GCGTCGCCTTGTGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_trifoliata_x_erecta_H5.clone9 TGCGGAAGGATCATTGTCGTTGCCATCAGAA-CGTATCAACTCGCGAATTGTTTTTT-GCCACACCCCCGGGG-AGGC-GGTGGAG---CTTTGCTTCGTCGATTTCCCCGTTGGCAAGTGCCCCAGTTGCATCGTGCTGCTTGTGCCTTGTC-GACACAACTATAACTCGGGCGCTCTGCGCCAAGGAAT-TTCGAGAAACATGCTTTGCCCACGGCAG--CCCGGAAACGGCGCCTGTCGGGGAGCATTGCGATAAT-GTGTAC--ATGCAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACATCGTTGCCCCTCCCCCTTATGGG-----ATGGGCAGAGGATGGCCTCGCGTGAGCCCCGCGCTGCGGCTGGCCGAAAAAT--GAGTCCAA-GGTTGCAATCGCCACGCTCCTCTGTGGATGGGCGTCGCTCGATACCGGAC--GTGCGTGTATTGTCCCTTGGTTGGGCCCT-GAAGACCCTAT-GCGGCGCCTTGAGCGTCCTCGCTTCTAGCGCGACCCC Hoffmannseggia_viscosa_170 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGC-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTGGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCCCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CCCGGAAACGGTGCTTGTCTGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGTC--GTGCGCGTGTTGTCCCGTGGTCGGGCTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_viscosa_172 TGCGGAAGGATCATTGTCGTTGCCTTCAAAA-CATGACAACTCGCGAATCGTCTTT--GCTCGACCCATGGGG-AGGC-GTCGGCG---CTATGCGCCCTCGGATCCCTCGTTGGCAAGAGTGCCTGTTGCCTTGTGCAGCACGTGCCTTGTT-GACACAACCAA--CCCGGGCGCCCTGCGCCAAGGAAA-TTCGATAAACATGCGT-GCTCACGGCAG--CCCGGAAACGGTGCTTGTCTGGGAGCATTGCAAGAGTTGTGTAC--ATATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCAAGGGCACGTCT{CG}CCTGGGTGTCACACATCGTTGCCCCTCCCCGAGACGGG-----ATGGGCGTAGGATGGCCTCCCGTGAGCCTTGTGTTGCGGTTGGCCGAAAAAAT-GAGTCATC-CGTGGCAATCGCCACGCTCCTCGGTGGATGAGTACAACTCGATACCGGTC--GTGCGCGTGTTGTCCCGTGGTCGGGCTCT--AGGACCCTTT-GCGGCGCCTTGTGTGCACGCACATCCAACGCGACCCC Hoffmannseggia_watsonii TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTAACAACCCGCGAATTGTTTTTA-GTCACACCCATGGGG-AGGC-GGCGGGGGGGCTCTGCTTCCTCGACTTCTCCGTTGGCAGGTGCGCCAGTCGCCTCGCGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAACGTGCTT-GCCCACGGCAG--CCCGGGAACGGCGCTTGCCGGGGAGCATTGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTCTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACTTCGTTGCCCCTCCCCGCGACGGG-----ACGGGTAGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGTGGCGATCGCCACGCTCCTAGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGCGTGCTGTCAC---------CTCTCGACGACCCTTTTGCGGCGCCTTGCGCGTCCTCACTTCCGGCGCGACCCC Hoffmannseggia_yaviensis TGCGGAAGGATCATTGCCGTTGCCTTCAAAA-CGTAACAACTCGCGAATTGTTTTTT-GTCACACCCTTGGGG-AGGC-GGCGGGG---CTTTGCTTCCTCGACTTCTCCGTTGGCAAGTGCTCCAGTTGCCTCGCGCAGCGCGTGCCTTGCC-GACACAACTAA--CCCGGGCGCTCTGCGCCAAGGAAA-TTCGAGAAATGTGCTT-GCCCACGGCAG--CCCGGGAACGGCGCTTGCCGGGGAGCATTGCGAGAACAGTGTAC--ACACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGCAGCCTTTAGGCCAAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCTGCGACGGG-----ATGGGCGGAGGATGGCCTCCCGTGAGCCACGTGCTGCGGCTGGCCGAAAAATC-GAGTCCTA-GGTGGCAATCGCCACGCTCCTCGGTGGATGAGCGCCGCTCGATACCGGAC--GTGCGCGTGTTGTCACTTGGTTGGCCCTC-GAAGACCCTTTTGCGGCGCCTTGTGCGTCCTCACTTCCAGCGCGACCCC Zuccagnia_punctata TGCGGAAGGATCATTGTCGTTGCCTCTAAAC-CAGAACAACTCGCGAATCGGTTTTT-GCTCAATCCTTGGGG-AGGC-GGCGGTG---CTTGTCGCCCTCGGCTCCCCTGTTGGCAGGAGTGCTTGTTGCCTCGTGCAGCACGTGCCCTGTTTGACACAACTAA--CCCGGGCGCCCTGCGCCAAGGAAACTTTGATGAATCGGCGT-GCCCACGACGG--GCCGGGAACGGCACAGGTCGGGGAGCATTGCGAAAATTTTGTAC----ATAATGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGTCTGCCTGGGTGTCACACATCGTTGCCCCTCCCCACGACGGG-----ATCGGCGGATCATGGCCTCCCGTGAGCCTCATGCTGCGGTTGGCCGAAAAAAT-GAGTCCTC-GGCGGCGATCGCCACGCTCCTCGGTGGATGAGTGCAACTCGATACCGGAC--GTGCGCGTTTTGTCCCGTGGCTGGGCTCA--AAGACCCTAT-GCGTCGCCTCGAGCGATTGCACATCCAACGCGACCCC ; END; BEGIN SETS; CHARSET 5.8S (CHARACTERS = 'ITS, with clones') = 271-434; CHARSET ITS2 (CHARACTERS = 'ITS, with clones') = 435-657; CHARSET ITS1 (CHARACTERS = 'ITS, with clones') = 1-270; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'ITS, with clones') = N: 1-657; CODONPOSSET CodonPositions (CHARACTERS = 'ITS, with clones') = N: 1-657; END; [ The following blocks are output data for analysis step 2202 ] BEGIN TREES; TITLE Tb6977; LINK TAXA = TaxaForAnalysisStep2202; TREE ITS_with_clones = [&R] (Balsamocarpon_brevifolia,(((Caesalpinia_pumilio,Hoffmannseggia_drummondii),(((Hoffmannseggia_intricata,Hoffmannseggia_microphylla),Hoffmannseggia_penninsularis),(Hoffmannseggia_ternata_97,Hoffmannseggia_ternata_H14,Hoffmannseggia_ternata_H19,Hoffmannseggia_ternata_H20,Hoffmannseggia_ternata_H28,(Hoffmannseggia_viscosa_170,Hoffmannseggia_viscosa_172)))),(((((((((Hoffmannseggia_arequipensis_H15,Hoffmannseggia_arequipensis_H16,Hoffmannseggia_miranda_100),Hoffmannseggia_miranda_H21),Hoffmannseggia_miranda_H18),Hoffmannseggia_humilis),Hoffmannseggia_prostrata),(((Hoffmannseggia_drepanocarpa,Hoffmannseggia_repens),Hoffmannseggia_oxycarpa),(Hoffmannseggia_tenella,Hoffmannseggia_watsonii))),Hoffmannseggia_yaviensis),(((Hoffmannseggia_doelli,Hoffmannseggia_minor),((((Hoffmannseggia_erecta,Hoffmannseggia_trifoliata_x_erecta_H5.clone2B,Hoffmannseggia_trifoliata_x_erecta_H5.clone9,Hoffmannseggia_erecta_x_trifoliata_H6.clone10B,Hoffmannseggia_erecta_x_trifoliata_H6.clone2,Hoffmannseggia_erecta_x_trifoliata_H6.clone3,Hoffmannseggia_erecta_x_trifoliata_H6.clone4B,Hoffmannseggia_erecta_x_trifoliata_H6.clone5B,Hoffmannseggia_erecta_x_trifoliata_H6.clone6B,Hoffmannseggia_erecta_x_trifoliata_H6.clone7,Hoffmannseggia_erecta_x_trifoliata_H6.clone9),Hoffmannseggia_trifoliata_x_erecta_H5.clone5B),Hoffmannseggia_erecta_x_trifoliata_H6.clone3B),(Hoffmannseggia_trifoliata,Hoffmannseggia_trifoliata_x_erecta_H5.clone1,Hoffmannseggia_trifoliata_x_erecta_H5.clone1B,Hoffmannseggia_trifoliata_x_erecta_H5.clone3,Hoffmannseggia_trifoliata_x_erecta_H5.clone4,Hoffmannseggia_trifoliata_x_erecta_H5.clone4B,Hoffmannseggia_trifoliata_x_erecta_H5.clone6,Hoffmannseggia_trifoliata_x_erecta_H5.clone8B,Hoffmannseggia_erecta_x_trifoliata_H6.clone1))),(Hoffmannseggia_glauca_176,Hoffmannseggia_glauca_24))),Hoffmannseggia_eromophila)),Zuccagnia_punctata); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1867] END;