#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 15:39 GMT TreeBASE (cc) 1994-2008 Study reference: Barnes I., Fourie A., Wingfield M.J., Harrington T., Mcnew D.L., Sugiyama L.S., Luiz B.C., Heller W.P., & Keith L. 2018. New Ceratocystis species associated with rapid death of Metrosideros polymorpha in Hawaii. Persoonia, 40: 154-181. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S22005] [ The following blocks are input data for analysis step 22178 ] BEGIN TAXA; TITLE TaxaForAnalysisStep22178; DIMENSIONS NTAX=48; TAXLABELS 'Ceratocystis albifundus CMW4068_DQ520638_Acacia_mearnsii_South_Africa' 'Ceratocystis atrox CMW19383_EF070414_Eucalyptus_grandis_Australia' 'Ceratocystis atrox CMW19385_NR136981_Eucalyptus_grandis_Australia' 'Ceratocystis cercfabiensis CMW42736_KP727583_Eucalyptus_sp_China_Group_2' 'Ceratocystis cercfabiensis CMW42736_KP727584_Eucalyptus_sp_China_Group_1' 'Ceratocystis cercfabiensis CMW42741_KP727586_Eucalyptus_sp_China_Group_2' 'Ceratocystis cercfabiensis CMW42741_KP727588_Eucalyptus_sp_China_Group_1' 'Ceratocystis cercfabiensis CMW42795_KP727583_Eucalyptus_sp_China_Group_2' 'Ceratocystis cercfabiensis CMW43029_KP727592_Eucalyptus_sp_China_Group_2' 'Ceratocystis cercfabiensis CMW43029_KP727593_Eucalyptus_sp_China_Group_2' 'Ceratocystis cercfabiensis CMW43029_KP727594_Eucalyptus_sp_China_Group_2' 'Ceratocystis changhui BPI596161_AY526304_Colocasia_esculenta_China' 'Ceratocystis changhui BPI596162_AY526305_Colocasia_esculenta_China' 'Ceratocystis changhui CMW43272_KY643886_Colocasia_esculenta_China' 'Ceratocystis changhui CMW43281_KY643884_Colocasia_esculenta_China' 'Ceratocystis changhui PY1_KF963102_Eriobotrya_japonica_China' 'Ceratocystis changhui PY2_KF963101_Eriobotrya_japonica_China' 'Ceratocystis collisensis CMW42552_KP727578_Cunninghamia_lanceolata_China' 'Ceratocystis collisensis CMW42554_KP727580_Cunninghamia_lanceolata_China' 'Ceratocystis corymbiicola CMW29120_NR119830_Corymbia_variegata_Australia' 'Ceratocystis corymbiicola CMW2939_HM071919_Eucalyptus_pilularis_Australia' 'Ceratocystis ficicola CMW38543_NR119410_Ficus_carica_Japan' 'Ceratocystis ficicola CMW38544_Ficus_carica_Japan' 'Ceratocystis fimbriata CMW14799_KC493160_Ipomoea_batatas_North_Carolina_USA' 'Ceratocystis fimbriata CMW1547_AF264904_Ipomoea_batatas_Papua_New_Guinea' 'Ceratocystis huliohiae CMW44104_Metrosideros_polymorpha_Hawaii' 'Ceratocystis huliohiae CMW46716_Metrosideros_polymorpha_Hawaii' 'Ceratocystis huliohiae CMW46721_Metrosideros_polymorpha_Hawaii' 'Ceratocystis huliohiae CMW46738_Metrosideros_polymorpha_Hawaii' 'Ceratocystis huliohiae CMW47135_KY809155_Metrosideros_polymorpha_Hawaii' 'Ceratocystis huliohiae CMW47143_Metrosideros_polymorpha_Hawaii' 'Ceratocystis huliohiae CMW47149_KY809156_Metrosideros_polymorpha_Hawaii' 'Ceratocystis larium CMW25434_NR137016_Styrax_benzoin_Indonesia' 'Ceratocystis larium CMW25435_EU881907_Styrax_benzoin_Indonesia' 'Ceratocystis lukuohia CMW44102_KP203957_Metrosideros_polymorpha_Hawaii_Group_1' 'Ceratocystis lukuohia CMW46741_KY809158_Metrosideros_polymorpha_Hawaii_Group_2' 'Ceratocystis obpyriformis CMW23807_EU245004_Acacia_mearnsii_South_Africa' 'Ceratocystis obpyriformis CMW23808_EU245003_Acacia_mearnsii_South_Africa' 'Ceratocystis pirilliformis CMW6569_AF427104_Eucalyptus_nitens_Australia' 'Ceratocystis pirilliformis CMW6579_NR119452_Eucalyptus_nitens_Australia' 'Ceratocystis polychroma CMW11424_AY528970_Syzygium_aromaticum_Indonesia' 'Ceratocystis polychroma CMW11436_AY528971_Syzygium_aromaticum_Indonesia' 'Ceratocystis polychroma CMW11449_AY528972_Syzygium_aromaticum_Indonesia' 'Ceratocystis polyconidia CMW23809_EU245006_Acacia_mearnsii_South_Africa' 'Ceratocystis polyconidia CMW23818_EU245007_Acacia_mearnsii_South_Africa' 'Ceratocystis uchidae C1931_AY526308_Xanthosoma__sagittifolium_Fiji' 'Ceratocystis uchidae CMW14796_AY526307_Colocasia_esculenta_Hawaii' 'Ceratocystis uchidae CMW14804_AY526306_Colocasia_esculenta_Hawaii' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M46112] TITLE 'Ceratocystis ITS Asian-Australian clade 48x630'; LINK TAXA = TaxaForAnalysisStep22178; DIMENSIONS NCHAR=630; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] 'Ceratocystis albifundus CMW4068_DQ520638_Acacia_mearnsii_South_Africa' CATGTGTGAAC--ATACCC-TGTCTTTT------GGTGA-----------AGACGGAAAGCTGCCTTGGTGGGT----------GTCTGTAGTGGTGTTAACCT--CTTTTTATAAGG-GGGCAGC-------------------------CCACTACCGCTAGCCACCAGCAGCA-T---------------------ACAAGTCTTTTACCAC-TATAAA---CCTTC--TGTATATTTTTT---AAAATTTTTAAAAATTGCTGAGT--GGCATAA-CTATAAAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGACTTGC------TTTAGTTTTGGTGTTGGAGGTCCTGTTCTTACCCTTCC----------GAACAGGCCGCCGAAATGCATCGGCTGTTATTTTTACTTG-CCAACTCCCCTGTGTAG---TACAAGA------------TTTTTTAAATTTTTACGCTTTGGAGT 'Ceratocystis atrox CMW19383_EF070414_Eucalyptus_grandis_Australia' CATGTGTGAAC--GTAAT--TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCTTTGGTAG-TT----------GTTGGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGTAATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGTGGGGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTCTTTTTTTTTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATG-ATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TA??????????????????????????????????????????? 'Ceratocystis atrox CMW19385_NR136981_Eucalyptus_grandis_Australia' CATGTGTGAAC--GTAAT--TATCTTGT------GAACAGAT--------GAACAAAA-GCTGCTTTGGTAG-TT----------GTTGGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGTAATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGTGGGGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTCTTTTTTTTTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TA??????????????????????????????????????????? 'Ceratocystis cercfabiensis CMW42736_KP727583_Eucalyptus_sp_China_Group_2' CATGTGTGAAC--GTAACC-TATCTTGT------GAAGAGAT--------GGACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW42736_KP727584_Eucalyptus_sp_China_Group_1' CATGTGTGAAC--ATAACC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW42741_KP727586_Eucalyptus_sp_China_Group_2' CATGTGTGAAC--GTAACC-TATCTTGT------GAAGAGAT--------GGACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTGTTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW42741_KP727588_Eucalyptus_sp_China_Group_1' CATGTGTGAAC--ATAACC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW42795_KP727583_Eucalyptus_sp_China_Group_2' CATGTGTGAAC--GTAACC-TATCTTGT------GAAGAGAT--------GGACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW43029_KP727592_Eucalyptus_sp_China_Group_2' CATGTGTGAAC--GTAACC-TATCTTGT------GAAGAGAT--------GGACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------CACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW43029_KP727593_Eucalyptus_sp_China_Group_2' CATGTGTGAAC--GTAACC-TATCTTGT------GAAGAGAT--------GGACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis cercfabiensis CMW43029_KP727594_Eucalyptus_sp_China_Group_2' CATGTGTGAAC--GTAACC-TATCTTGT------GAAGAGAT--------GGACAAAA-GCTGCTTTGGTAG-TT-------------GGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis changhui BPI596161_AY526304_Colocasia_esculenta_China' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAA?-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CC?TCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA---CCTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis changhui BPI596162_AY526305_Colocasia_esculenta_China' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA---CCTC-TTTTATTTTTT--GTTAGAAATTTG?TTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis changhui CMW43272_KY643886_Colocasia_esculenta_China' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA---CCTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis changhui CMW43281_KY643884_Colocasia_esculenta_China' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA---CCTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis changhui PY1_KF963102_Eriobotrya_japonica_China' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA---CCTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis changhui PY2_KF963101_Eriobotrya_japonica_China' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA---CCTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis collisensis CMW42552_KP727578_Cunninghamia_lanceolata_China' CCTTTGTGA-CTAGTAAAC-CCCCCTCTAGTGGTATAGAGATATGGGGGGG-ATAGTGTGCTGTTTTGGTAG-T-GTGGGTGAGTTTAGGGGGGGGGGGGGGTGGACCTTCTGTAAGGCAGGTCTTTTTCGCC---TCTATCTCTCTCTCTCCACTAC-------------CAGCAGT-AT---------TCTTCCTCCACAAGTCTCGCTACCACTATCACTTAACTC---TTAATATTTTTTT-AGA----TG-TTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGACCAC---------TGTTCTTGGTGTTGGAGGTCCTGTTCTCTTTT-CCTTCTGGAAAAAATACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTGCCCAACTCCCCTGTGTAGTAGTATAAAA------------------------TTACACTTTGTAGT 'Ceratocystis collisensis CMW42554_KP727580_Cunninghamia_lanceolata_China' CCTTTGTGA-CTAGTAAAC-CCCCCTCTAGTGGTATAGAGATATGGGGGGG-ATAGTGTGCTGTTTTGGTAG-T-GTGGGTGAGTTTAGGGGGGGGGGGGGGTGGACCTTCTGTAAGGCAGGTCTTTTTCGCC---TCTATCTCTCTCTCTCCACTAC-------------CAGCAGT-AT---------TCTTCCTCCACAAGTCTCGCTACCACTATCACTTAACTC---TTAATATTTTTTT-AGA----TG-TTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGACCAC---------TGTTCTTGGTGTTGGAGGTCCTGTTCTCTTTT-CCTTCTGGAAAAAATACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTGCCCAACTCCCCTGTGTAGTAGTATAAAA------------------------TTACACTTTGTAGT 'Ceratocystis corymbiicola CMW29120_NR119830_Corymbia_variegata_Australia' CATGTGTGAAC--ATAACC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCTTTGGTAG-TT----------GGGGGGGGGCAC---------CCTTCTGTAAAGAAGGTTTTCTTTT--------------------CCACTAC-------------CAGCAGT-ATAA--GTCCATCTTCTT-------------TACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC------TTTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTGCCCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis corymbiicola CMW2939_HM071919_Eucalyptus_pilularis_Australia' CATGTGTGAAC--ATAACC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCTTTGGTAG-TT------------GGGGGGGCAC---------CCTTCTGTAAAGAAGTTTT-CTTTT--------------------CCACTAC-------------CAGCAGT-ATAA--GTCCATCTTCTT-------------TACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC------TTTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTGCCCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis ficicola CMW38543_NR119410_Ficus_carica_Japan' CATGTGTGAAC--GTAAACGTATCTTGTA-----ATTAAGAT--------AAGAGATATGCTGCTTTGGTAG-TT--------------GGGGGAGTTCC------CCTTCTATAAGG---TTTTCTTTTC--------------------CCACTAC-------------CAGCAGT-ATAA------TTCTTCTTTTTTT--------TACCACTAAAAA----CTCTTTTTTTATTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT---AAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTG----TTTTTTTTTCTTGGTGTTGGAGGTCCTGTTCTTCACT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTCT----ACTTG-CCAGCTCCCCTGTGTAG---TACAAAA-----------TTTTTACAA-TTTTTACACTTTGAAGC 'Ceratocystis ficicola CMW38544_Ficus_carica_Japan' CATGTGTGAAC--GTAAACGTATCTTGTA-----ATTAAGAT--------AAGAGATATGCTGCTTTGGTAG-TT--------------GGGGGAGTTCC------CCTTCTATAAGG---TTTTCTTTTC--------------------CCACTAC-------------CAGCAGT-ATAA------TTCTTCTTTTTTT--------TACCACTAAAAA----CTCTTTTTTTATTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT---AAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTG----TTTTTTTTTCTTGGTGTTGGAGGTCCTGTTCTTCACT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTCT----ACTTG-CCAGCTCCCCTGTGTAG---TACAAAA-----------TTTTTACAA-TTTTTACACTTTGAAGC 'Ceratocystis fimbriata CMW14799_KC493160_Ipomoea_batatas_North_Carolina_USA' CATGTGTGAAC--GTACC--TATCTTGT------AGTGAGAT--------GAAT-----GCTGTTTTGGTGG-T----------------AGGGC-----------CCTTCTGAAGGGAGGGCA---------------------------CCGCTGC-------------CAGCAGT-AT-T-------------------AGTCTCACCACTA-TAAA------CTC--TTTTATTATTTT-CTAGA-----TTTTTCATTGCTGAGT--GGCATAA-CTATAAAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGATTAT--------TCTTTCTTGGCGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA--------------TTTCTAATTTTTACACTTTGAAGT 'Ceratocystis fimbriata CMW1547_AF264904_Ipomoea_batatas_Papua_New_Guinea' CATGTGTGAAC--GTACC--TATCTTGT------AGTGAGAT--------GAAT-----GCTGTTTTGGTGG-T----------------AGGGC-----------CCTTCTGAAGGGAGGGCA---------------------------CCGCTGC-------------CAGCAGT-AT-T-------------------AGTCTCACCACTA-TAAA------CTC--TTTTATTATTTT-CTAGA-----TTTTTCATTGCTGAGT--GGCATAA-CTATAAAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGATTAT--------TCTTTCTTGGCGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGCATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA--------------TTTCTAATTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW44104_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW46716_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW46721_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW46738_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW47135_KY809155_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW47143_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis huliohiae CMW47149_KY809156_Metrosideros_polymorpha_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT--------------GGGGGGCC---------CCTTCTATAAGG--------TTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAA-----CTC-TTTTATTTTTTTTGTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA----------TTTCTTCTAA-TTTTTACACTTTGAAGT 'Ceratocystis larium CMW25434_NR137016_Styrax_benzoin_Indonesia' CATTTGTGAACTAGTAAAC-CCCCCTCTAGTGGTATAGAGATATGGGGGGGAATAGTGTGCTGTTTTGGTAG-T-GTAGAGGGGGTTAAGTTAGGGGGG-AATGGACCTTCTGTAAGGCAGGTCTTTTTCGCTCTATCTCTCTCTCTCTCTCCGCTAC-------------CAGCAGT-AT---------TCTTCCTCCACAAGTCTCGCTACCACTCTCACTTAACTC---TTAATATTTTTTT-AGA----TG-TTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGACCAC---------TGTTCTTGGCGTTGGAGGTCCTGTTCTCTTTTTCCTTCTGGAAAAAATACAGGCCACCGAAATGCATCGGCTGTTAT----ACTTGCCCAACTCCCCTGTGTAG---TACAAGA------------TTTTTTAAATTTTTACGCTTTGGAGT 'Ceratocystis larium CMW25435_EU881907_Styrax_benzoin_Indonesia' CATTTGTGAACTAGTAAAC-CCCCCTCTAGTGGTATAGAGATATGGGGGGGAATAGTGTGCTGTTTTGGTAG-T-GTTGAGGGGGTTAAGTTAGGGGGG-AATGGACCTTCTGTAAGGCCAGTCTTTTTCGCTCTATCTCTCTCTCTCTCTCCGCTAC-------------CAGCAGT-AT---------TCTTCCTCCACAAGTCTCGCTACCACTCTCACTTAACTC---TTAATATTTTTTT-AGA----TG-TTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGACCAC---------TGTTCTTGGCGTTGGAGGTCCTGTTCTCTTTTTCCTTCTGGAAAAAATACAGGCCACCGAAATGCATCGGCTGTTAT----ACTTGCCCAACTCCCCTGTGTAG---TACAAGA------------TTTTTTAAATTTTTACGCTTTGGAGT 'Ceratocystis lukuohia CMW44102_KP203957_Metrosideros_polymorpha_Hawaii_Group_1' CATGTGTGAAC--ATACC--TATCTTGT------AGTGAGAT--------GAATT----GCTGTTTTGGTGG-T----------------AGGGC-----------CCTTCTGAAGGGTA-------------------------------CCGCTGC-------------CAGCAGT-ATAT------------------AAGTCTCGCCACTG-TAAA------CTC----TTACTATTTT-CTTAA------TTTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGGACTCC------TTTGTTCTTGGCGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA--------------TTTCTAATTTTTACACTTTGAAGT 'Ceratocystis lukuohia CMW46741_KY809158_Metrosideros_polymorpha_Hawaii_Group_2' CATGTGTGAAC--ATACC--TATCTTGT------AGTGAGAT--------GAATT----GCTGTTTTGGTGG-T----------------AGGGC-----------CCTTCTGAAGGGCA-------------------------------CCGCTGC-------------CAGCAGT-ATAT------------------AAGTCTCGCCACTG-TAAA------CTC----TTACTATTTT-CTTAA------TTTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGGACTCC-----TTTTGTTCTTGGCGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA--------------TTTCTAATTTTTACACTTTGAAGT 'Ceratocystis obpyriformis CMW23807_EU245004_Acacia_mearnsii_South_Africa' CATTTGTGAAC--GTTACC-TATCTTGT------ACTGAGAT----GAATAAACAATATGCTGCTTTGGTAG-TT------------GGGGGGGGGGAGAGCTCCGCCTTGGGTGAAGTTTTTTTCTTTT---------------------CCACTAC-------------CAGCAGT-ATAAAAGTAGTTTTCTCTT------------TACCACTAAAAAA---CTC--TTTAATATTTTT-ATAGAAATTTGATTTCATTGCTGAGTGAAGCATAAA--AT-AATAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAAAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTACTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTA--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTTCT----------------GAGCAGGCCGCCGAAATGTATCGGCTGTTAA----ACTTG-CCAACTCCCCTGTGTAG---TA??????????????????????????????????????????? 'Ceratocystis obpyriformis CMW23808_EU245003_Acacia_mearnsii_South_Africa' CATTTGTGAAC--GTTACC-TATCTTGT------ACTGAGAT----GAATAAACAATATGCTGCTTTGGTAG-TT------------GGGGGGGGGGAGAGCTCCGCCTTGGGTGAAGTTTTTTTCTTTT---------------------CCACTAC-------------CAGCAGT-ATAAAAGTAGTTTTCTCTT------------TACCACTAAAAAA---CTC--TTTAATATTTTT-ATAGAAATTTGATTTCATTGCTGAGTGAAGCATAAA--AT-AATAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAAAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTACTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTA--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTTCT----------------GAGCAGGCCGCCGAAATGTATCGGCTGTTAA----ACTTG-CCAACTCCCCTGTGTAG---TA??????????????????????????????????????????? 'Ceratocystis pirilliformis CMW6569_AF427104_Eucalyptus_nitens_Australia' CATTTGTGAAC--GTTACC-TATCTTGT------ACTGAGAT----GAATAAACAATATGCTGCTTTGGTAG-TT------------GGGGGGGGGGAGAGCTCCGCCTTGTGTGAAGTTTTTTTCTTTT---------------------CCACTAC-------------CAGCAGT-ATAAAAGTAGTTTTCTCTT------------TACCACTAAAAAA---CTC--TTTAATATTTTT-ATAGA--TTTGATTTCATTGCTGAGT--GGCATAA-CTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTACTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTA-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTTCT----------------GAGCAGGCCGCCGAAATGTATCGGCTGTTAA----ACTTG-CCAACTCCCCTGTGTAG---TATAAAGGAATAATTTTTTTTTTCCAATTTTTTACATTTTGAAGT 'Ceratocystis pirilliformis CMW6579_NR119452_Eucalyptus_nitens_Australia' CATTTGTGAAC--GTTACC-TATCTTGT------ACTGAGAT----GAATAAACAATATGCTGCTTTGGTAG-TT-------------GGGGGGGGGAGAGCTCCGCCTTGTGTGAAGTTTTTTTCTTTT---------------------CCACTAC-------------CAGCAGT-ATAAAAGTAGTTTTCTCTT------------TACCACTAAAAAAA--CTC--TTTAATATTTTT-ATAGAAATTTGATTTCATTGCTGAGTGAAGCATAAA--AT-AATAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTACTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTA--------TTTTTCTTGGTGTTGGAGGTCCTGTTCTTCT----------------GAGCAGGCCGCCGAAATGTATCGGCTGTTAA----ACTTG-CCAACTCCCCTGTGTAG---TATAAAGGAATAATTTTTTTTTTCCAATTTTTTACATTTTGAAGT 'Ceratocystis polychroma CMW11424_AY528970_Syzygium_aromaticum_Indonesia' CATGTGTGAAC--GTAACT-TATCTTGT------GAAGAGAT--------GAACAAAAAGCTGCTTTGGTAG-TT----------GGGGGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTCTTTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis polychroma CMW11436_AY528971_Syzygium_aromaticum_Indonesia' CATGTGTGAAC--GTAACT-TATCTTGT------GAAGAGAT--------GAACAAAAAGCTGCTTTGGTAG-TT----------GGGGGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTCTTTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis polychroma CMW11449_AY528972_Syzygium_aromaticum_Indonesia' CATGTGTGAAC--GTAACT-TATCTTGT------GAAGAGAT--------GAACAAAAAGCTGCTTTGGTAG-TT----------GGGGGGGGGCAC---------CCTTCTGTAAAGAAGTTTTCTTTC---------------------CCACTAC-------------CAGCAGT-ATAA--GTCA-TCTTCTT-------------TACCACTAAAAA----CTCTTTTTATTTTTT--GT-AGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT-AAAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCCCCT--------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TATAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis polyconidia CMW23809_EU245006_Acacia_mearnsii_South_Africa' CATTTGTGAAC--GTTACC-TATCTTGT------ACTGAGAT----GAATAAACAATATGCTGCTTTGGTAG-TT-------------GGGGGGGGGAGAGCTCCGCCTTGTGTGAAGTTTTTTTCTTTT---------------------CCACTAC-------------CAGCAGT-ATAAAAGTAGTTTTCTCTT------------TACCACTAAAAAA---CTC--TTTAATATTTTT-ATAGAAATTTGATTTCATTGCTGAGTGAAGCATAAA--AT-AATAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCCCCTTGCGCCTGGCAGTACTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTA-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTTCT----------------GAGCAGGCCGCCGAAATGTATCGGCTGTTAA----ACTTG-CCAACTCCCCTGTGTAG---TA??????????????????????????????????????????? 'Ceratocystis polyconidia CMW23818_EU245007_Acacia_mearnsii_South_Africa' CATTTGTGAAC--GTTACC-TATCTTGT------ACTGAGAT----GAATAAACAATATGCTGCTTTGGTAG-TT-------------GGGGGGGGGAGAGCTCCGCCTTGTGTGAAGTTTTTTTCTTTT---------------------CCACTAC-------------CAGCAGT-ATAAAAGTAGTTTTCTCTT------------TACCACTAAAAAA---CTC--TTTAATATTTTT-ATAGAAATTTGATTTCATTGCTGAGTGAAGCATAAA--AT-AATAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCCCCTTGCGCCTGGCAGTACTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTA-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTTCT----------------GAGCAGGCCGCCGAAATGTATCGGCTGTTAA----ACTTG-CCAACTCCCCTGTGTAG---TA??????????????????????????????????????????? 'Ceratocystis uchidae C1931_AY526308_Xanthosoma__sagittifolium_Fiji' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT------------GGGGGGGGCC---------CCTTCTATAAGG-------TTTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAAA---CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCTCCCCT------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA-----------TTTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis uchidae CMW14796_AY526307_Colocasia_esculenta_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT-------------GGGGGGGCC---------CCTTCTATAAGG-------TTTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCTCCCCT------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT 'Ceratocystis uchidae CMW14804_AY526306_Colocasia_esculenta_Hawaii' CATGTGTGAAC--GTAAAC-TATCTTGT------GAAGAGAT--------GAACAAAA-GCTGCCTTGGTAG-TT-------------GGGGGGGCC---------CCTTCTATAAGG-------TTTTT---------------------CCACTAC-------------CAGCAGT-ATAA--GTAA-TCTTCTT-------------CACCACTAAAAA----CTC-TTTTATTTTTT--GTTAGAAATTTGATTTCATTGCTGAGT--GGCATAAACTAT--AAAAAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGCAGTATTCTGCCAGGCATGCCTGTCCGAGCGTCATTTCACCACTCAAGAACTC-------TTTTTTCTTGGTGTTGGAGGTCCTGTTCTCTCCCCT------------GAACAGGCCGCCGAAATGTATCGGCTGTTAT----ACTTG-CCAACTCCCCTGTGTAG---TACAAAA------------TTTTCCAA-TTTTTACACTTTGAAGT ; END; [ The following blocks are output data for analysis step 22178 ] BEGIN TREES; TITLE 'Ceratocystis ITS Asian-Australian'; LINK TAXA = TaxaForAnalysisStep22178; TREE ITS_AAC = [&R] ((((((('Ceratocystis uchidae C1931_AY526308_Xanthosoma__sagittifolium_Fiji':2.0,'Ceratocystis uchidae CMW14796_AY526307_Colocasia_esculenta_Hawaii':0.0,'Ceratocystis uchidae CMW14804_AY526306_Colocasia_esculenta_Hawaii':0.0):4.0,(('Ceratocystis huliohiae CMW44104_Metrosideros_polymorpha_Hawaii':0.0,'Ceratocystis huliohiae CMW46716_Metrosideros_polymorpha_Hawaii':0.0,'Ceratocystis huliohiae CMW46721_Metrosideros_polymorpha_Hawaii':0.0,'Ceratocystis huliohiae CMW46738_Metrosideros_polymorpha_Hawaii':0.0,'Ceratocystis huliohiae CMW47135_KY809155_Metrosideros_polymorpha_Hawaii':0.0,'Ceratocystis huliohiae CMW47143_Metrosideros_polymorpha_Hawaii':0.0,'Ceratocystis huliohiae CMW47149_KY809156_Metrosideros_polymorpha_Hawaii':0.0):7.0,'Ceratocystis changhui BPI596162_AY526305_Colocasia_esculenta_China':0.0,'Ceratocystis changhui CMW43272_KY643886_Colocasia_esculenta_China':0.0,'Ceratocystis changhui PY1_KF963102_Eriobotrya_japonica_China':0.0,'Ceratocystis changhui PY2_KF963101_Eriobotrya_japonica_China':0.0,'Ceratocystis changhui CMW43281_KY643884_Colocasia_esculenta_China':0.0,'Ceratocystis changhui BPI596161_AY526304_Colocasia_esculenta_China':0.0):2.0):8.0,(('Ceratocystis cercfabiensis CMW42736_KP727583_Eucalyptus_sp_China_Group_2':0.0,'Ceratocystis cercfabiensis CMW42741_KP727586_Eucalyptus_sp_China_Group_2':1.0,'Ceratocystis cercfabiensis CMW42795_KP727583_Eucalyptus_sp_China_Group_2':0.0,'Ceratocystis cercfabiensis CMW43029_KP727592_Eucalyptus_sp_China_Group_2':1.0,'Ceratocystis cercfabiensis CMW43029_KP727593_Eucalyptus_sp_China_Group_2':1.0,'Ceratocystis cercfabiensis CMW43029_KP727594_Eucalyptus_sp_China_Group_2':0.0):1.0,(('Ceratocystis cercfabiensis CMW42736_KP727584_Eucalyptus_sp_China_Group_1':0.0,'Ceratocystis cercfabiensis CMW42741_KP727588_Eucalyptus_sp_China_Group_1':0.0):3.0,(('Ceratocystis polychroma CMW11436_AY528971_Syzygium_aromaticum_Indonesia':0.0,'Ceratocystis polychroma CMW11449_AY528972_Syzygium_aromaticum_Indonesia':1.0,'Ceratocystis polychroma CMW11424_AY528970_Syzygium_aromaticum_Indonesia':0.0):4.0,(('Ceratocystis corymbiicola CMW2939_HM071919_Eucalyptus_pilularis_Australia':3.0,'Ceratocystis corymbiicola CMW29120_NR119830_Corymbia_variegata_Australia':1.0):8.0,('Ceratocystis atrox CMW19383_EF070414_Eucalyptus_grandis_Australia':1.0,'Ceratocystis atrox CMW19385_NR136981_Eucalyptus_grandis_Australia':1.0):15.0):1.0):4.0):1.0):8.0):12.0,(((('Ceratocystis polyconidia CMW23818_EU245007_Acacia_mearnsii_South_Africa':0.0,'Ceratocystis polyconidia CMW23809_EU245006_Acacia_mearnsii_South_Africa':0.0):2.0,(('Ceratocystis obpyriformis CMW23807_EU245004_Acacia_mearnsii_South_Africa':0.0,'Ceratocystis obpyriformis CMW23808_EU245003_Acacia_mearnsii_South_Africa':0.0):3.0,'Ceratocystis pirilliformis CMW6579_NR119452_Eucalyptus_nitens_Australia':0.0):1.0):6.0,'Ceratocystis pirilliformis CMW6569_AF427104_Eucalyptus_nitens_Australia':4.0):53.0,('Ceratocystis ficicola CMW38544_Ficus_carica_Japan':0.0,'Ceratocystis ficicola CMW38543_NR119410_Ficus_carica_Japan':0.0):35.0):9.0):38.0,(('Ceratocystis collisensis CMW42554_KP727580_Cunninghamia_lanceolata_China':0.0,'Ceratocystis collisensis CMW42552_KP727578_Cunninghamia_lanceolata_China':0.0):26.0,('Ceratocystis larium CMW25435_EU881907_Styrax_benzoin_Indonesia':3.0,'Ceratocystis larium CMW25434_NR137016_Styrax_benzoin_Indonesia':0.0):18.0):95.0):27.0,(('Ceratocystis fimbriata CMW14799_KC493160_Ipomoea_batatas_North_Carolina_USA':0.0,'Ceratocystis fimbriata CMW1547_AF264904_Ipomoea_batatas_Papua_New_Guinea':0.0):14.0,('Ceratocystis lukuohia CMW44102_KP203957_Metrosideros_polymorpha_Hawaii_Group_1':1.0,'Ceratocystis lukuohia CMW46741_KY809158_Metrosideros_polymorpha_Hawaii_Group_2':1.0):15.0):29.0):63.0,'Ceratocystis albifundus CMW4068_DQ520638_Acacia_mearnsii_South_Africa':38.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr112114] END;