#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 19, 2025; 22:28 GMT

TreeBASE (cc) 1994-2008

Study reference:
Aedo C., Fiz-palacios O., Alarcón M.L., Navarro C., & Aldasoro J.J. 2005. Taxonomic
revision of Geranium sect. Dissecta (Geraniaceae). Systematic Botany, 30(3):
533-558.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1340]

[ The following blocks are input data for analysis step 2507 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep2507;
        DIMENSIONS NTAX=7;
        TAXLABELS
            Geranium_asphodeloides_1
            Geranium_asphodeloides_2
            Geranium_crenophilum
            Geranium_dissectum
            Geranium_palmatum
            Geranium_sintenisii_1
            Geranium_sintenisii_2
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1404]

	TITLE Dissecta_nrITS;
	LINK TAXA = TaxaForAnalysisStep2507;
	DIMENSIONS NCHAR=638;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=n GAP= -;

MATRIX
[                                    10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650   ]
[                                     .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .   ]
Geranium_asphodeloides_1     TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTTAACAAGCCGCGGGAGGCGGG-CGGCGCATGCGCC-CCCGCAGCCCGATGTCGGGGGCTTGGGCGACGCCC-ACGCTGCCCGGCAAAAAA-CGTACCCCCGGCGCGGTCCGCGCCAAGGAATCGAAACGAAGCAACGTGCGCAGTCCTCCCCGTCCGCGGGGAC-CGGACTGCAA-CACGGACTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCCGCAACCCCTAACCCCG-AAACGGGC-AGGGTGCTTGTGGTGCGGACATTGGTCTCCCGTGAGCTCTTGCGCTCGCGGCTGGCCTAAAATCGAGTCCCGGGCGCTCTGTT-TGCGGCCGACGGTGGTTGAGAAGCCCTCGAAAATGCGCCGCTGCATTGCTGCCCGACGT-GGACCACGTGACCCTCGCGCGACCTCACCCGT-GGGGTGAGGGAGCTCCATCT
Geranium_asphodeloides_2     TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTTAACAAGCCGCGGGAGGCGGG-CGGCGCATGCGCC-CCCGCAGCCCGATGTCGGGGGCTTGGGCGACGCCC-ACGCTGCCCGGCAAAAAA-CGTACCCCCGGCGCGGTCCGCGCCAAGGAATCGAAACGAAGCAACGTGCGCAGTCCTCCCCGTCCGCGGGGAC-CGGACTGCAA-CACGGACTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCCGCAACCCCTAACCCCG-AAACGGGC-AGGGTGCTTGTGGTGCGGACATTGGTCTCCCGTGAGCTCTTGCGCTCGCGGCTGGCCTAAAATCGAGTCCCGGGCGCTCTGTT-TGCGGCCGACGGTGGTTGAGAAGCCCTCGAAAATGCGCCGCTGCATTGCTGCCCGACGT-GGACCACGTGACCCTCGCGCGACCTCACCCGT-GGGGTGAGGGAGCTCCATCT
Geranium_crenophilum         TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTTAACAAGCCGCGGGAGGCGGG-CGGCGCATGCGCC-CCCGCAGCCCGATGTCGGGGGCTTGGGCGACGCCC-ACGCTGCCCGGCAAAAAA-CGTACCCCCGGCGCGGTCCGCGCCAAGGAATCGAAACGAAGCAACGTGCGCAGTCTTCCCCGTCCGCGGGGAC-CGGGCTGCAA-CACGGACTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCCGCAACCCCTAACCCCG-AAACGGGC-AGGGTCCTTGTGGTGCGGACATTGGTCTCCCGTGAGCTCTTGCGCTCGCGGCTGGCCTAAATTCGAGTCCCGGGCGCTCTGTT-TGCGGCCGACGGTGGTTGAGAAGCCCTCGAAAATGCGCTGCTGCATTGCTGCCCGACGT-GGACCACGTGACCCTCGCGCGACCTCACCCCT-GGGGTGAGGGAGCTCCATCT
Geranium_dissectum           TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTTAACAAGCCGCGGGAGGCGGG-CGGCGCATGCGCC-CCCGCAGCCCGATGCCGGGGGCTTGGGCCACGCCC-ACGCTGCCCGGCAAAAAA-CGTACCCCCGGCGCGGTCTGCGCCAAGGAATCGAAACGAAGCGACGTGCGCAGTCCTCCCCGTCCGCGGGGAT-CGGACTGCAA-CACGGACTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCTGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCCGCAACCCCTAGCCCCG-AAACGGGC-AGGGTGCTTGTGGCGCGGAAATTGGTCTCCCGTGAGCCTTTGCGCTCGCGGCTGGCCTAAAATAGAGTCCCGGGCGCTCTGTC-TGCGGCCGACGGTGGTTGAGAAGCCCTCGAAAATGCGCCGCTGCATTGCTGCCCGAAGT-GGACCACGTGACCCTTGCGCGACCTTGCCCTTGGGGGTGAGGGAGCTCCATCT
Geranium_palmatum            TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTAATCTAACTGCGGGAGACGG--TGGTGCTCGCACCATCCGCGACCCGATGTCGGGGGCAATGGCGCCAGCCTGCGCTCCCCGACAAACAA-CGTACCCCCGGCGCGGTCCGCGCCAAGGAACCGAATTGAAGCAACGTGCGTCGC{AG}CGCCCCGTCTGCGGG-ATGCGTGCGTCCG-CGCGGTCTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCCGCAACCCCAAACCCCG-AAACGGGCCAGGGATCAAGCGGTGCGGAGATTGGT{CT}TCCCGTGGG{CT}GA--GAGCTCGCGGCTGGCCTAAAATCGAGTCCCGGGCGCTCTGTTATGCGGCCGACGGTGGTTGAGAAGCCCTCGGAAATGTGCCGATGACAGGTCGCTC-ACTG{CT}GGACCACACGACCCTTGCGCGACTTCTCCTCTCGAGGAGGATGAGCTCTTACT
Geranium_sintenisii_1        TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTTAACAAGCCGCGGGAGGCGGG-CGGCGCA{CT}GCGCC-CCCGCAGCCCGATGTCGGGGGCTTGGGCGACGCCC-AAGCTGCCCGGCAAAAAA-CGTACCCCCGGCGCGGTCCGCGCCAAGGAATCGAAACGAAGCAACGTGCGCAGTCCTCCCCGTCCGCGGGGAC-CGGACTGCAA-CACGGACTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCC{CG}CAACCCCTAACCCCG-AAACGGGC-AGGGTGCTTGTGGTGCGGACATTGGTCTCCCGTGAGCTCTTGCGCTCGCGGCTGGCCTAAAATCGAGTCCCGGGCGCTCTGTT-TGCGGCCGACGGTGGTTGAGAAGCCCTCGAAAATGCGCCGCTGCATTGCTGCCCGACGT-GGACCACGTGACCCTCGCGC{AG}ACCTCACCC{AC}T-G{AG}GGTGAGGGAGCTCCATCT
Geranium_sintenisii_2        TCGAACCCTGCACAGCAGAACGACCCGCGAACTCGTTAACAAGCCGCGGGAGGCGGG-CGGCGCA{CT}GCGCC-CCCGCAGCCCGATGTCGGGGGCTTGGGCGACGCCC-AAGCTGCCCGGCAAAAAA-CGTACCCCCGGCGCGGTCCGCGCCAAGGAATCGAAACGAAGCAACGTGCGCAGTCCTCCCCGTCCGCGGGGAC-CGGACTGCAA-CACGGACTTCCAATGTATAC---TAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGC---GCTCCGTCGCCCC{CG}CAACCCCTAACCCCG-AAACGGGC-AGGGTGCTTGTGGTGCGGACATTGGTCTCCCGTGAGCTCTTGCGCTCGCGGCTGGCCTAAAATCGAGTCCCGGGCGCTCTGTT-TGCGGCCGACGGTGGTTGAGAAGCCCTCGAAAATGCGCCGCTGCATTGCTGCCCGACGT-GGACCACGTGACCCTCGCGC{AG}ACCTCACCC{AC}T-G{AG}GGTGAGGGAGCTCCATCT
;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions (CHARACTERS = Dissecta_nrITS) = 
		N: 1-638;
CODONPOSSET  CodonPositions (CHARACTERS = Dissecta_nrITS) = 
		N: 1-638;
END;
[ The following blocks are output data for analysis step 2507 ]
BEGIN TREES;
      TITLE Tb7282;
      LINK TAXA = TaxaForAnalysisStep2507;
      TREE Dissecta_ITS = [&R] (Geranium_palmatum,((Geranium_crenophilum,(Geranium_asphodeloides_1,Geranium_asphodeloides_2),(Geranium_sintenisii_1,Geranium_sintenisii_2)),Geranium_dissectum));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2125]


END;