#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 16:30 GMT TreeBASE (cc) 1994-2008 Study reference: Tian P., Xu W., Li C., Song H., Wang M., Schardl C.L., & Nan Z. 2019. Confirmation and taxonomy of one hybrid Epichloë species symbiotic with Festuca sinensis in Northwest of China. Mycologia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S24999] [ The following blocks are input data for analysis step 25669 ] BEGIN TAXA; TITLE TaxaForAnalysisStep25669; DIMENSIONS NTAX=161; TAXLABELS Epichloe_amarillans_AF457478 Epichloe_amarillans_L06958 Epichloe_amarillans_L06959 Epichloe_aotearoae_AF323371 Epichloe_aotearoae_GQ422364 'Epichloe australiensis C1_AF323379' 'Epichloe australiensis C2_AF323381' Epichloe_baconii_L06961 Epichloe_baconii_L78270 Epichloe_baconii_L78279 Epichloe_brachyelytri_AF062427 Epichloe_brachyelytri_L78271 Epichloe_bromicola_AF457488 Epichloe_bromicola_AY033369 Epichloe_bromicola_AY033371 Epichloe_bromicola_AY137612 Epichloe_bromicola_GU325782 Epichloe_bromicola_JN819475 Epichloe_bromicola_JN819476 Epichloe_bromicola_JN819479 Epichloe_bromicola_JN819485 Epichloe_bromicola_L78289 Epichloe_bromicola_L78290 'Epichloe bromicola NI_201308' 'Epichloe cabralii C1_AY707746' 'Epichloe cabralii C2_AY707720' 'Epichloe canadensis C1_JN886778' 'Epichloe canadensis C2_JN886777' 'Epichloe chisosa C1_AF457470' 'Epichloe chisosa C2_AF457471' 'Epichloe chisosa C3_AF457472' Epichloe_clarkii_L78281 'Epichloe coenophiala C1_L06964' 'Epichloe coenophiala C2_L06951' 'Epichloe coenophiala C3_X56847' 'Epichloe danica C1_JF718475' 'Epichloe danica C2_JF718476' 'Epichloe disjuncta C1_JF718437' 'Epichloe disjuncta C1_JF718440' 'Epichloe disjuncta C1_JF718469' 'Epichloe disjuncta C2_JF718438' 'Epichloe disjuncta C2_JF718441' 'Epichloe disjuncta C2_JF718470' Epichloe_elymi_AF250743 Epichloe_elymi_L06962 Epichloe_elymi_L78273 Epichloe_festucae_AF250747 Epichloe_festucae_L06955 Epichloe_festucae_lolii_AY865628 Epichloe_festucae_lolii_KC936144 Epichloe_festucae_lolii_L20304 'Epichloe funkii C1_AF457489' 'Epichloe funkii C2_AF457490' Epichloe_gansuensis_EF422756 Epichloe_gansuensis_EF422757 Epichloe_gansuensis_KC936101 Epichloe_glyceriae_L78275 Epichloe_glyceriae_L78276 'Epichloe guerinii C1_EF422754' 'Epichloe guerinii C2_EF422755' 'Epichloe hordelymi C1_AF457486' 'Epichloe hordelymi C2_AF457487' Epichloe_inebrians_AF457494 'Epichloe liyangensis C1_HM475156' 'Epichloe liyangensis C1_HM475157' 'Epichloe liyangensis C2_HM475160' 'Epichloe liyangensis C2_HM475161' 'Epichloe melicicola C1_AF323384' 'Epichloe melicicola C2_AF323386' Epichloe_mollis_AF457469 'Epichloe occultans C1_AF176268' 'Epichloe occultans C1_AF176269' 'Epichloe occultans C1_AF176270' 'Epichloe occultans C1_AF176271' 'Epichloe occultans C2_AF176272' 'Epichloe occultans C2_AF176274' 'Epichloe occultans C2_AF176275' 'Epichloe occultans C2_AF176276' 'Epichloe pampeana C1_FJ147181' 'Epichloe pampeana C2_FJ147188' Epichloe_poae_KC936113 Epichloe_poae_KC936114 Epichloe_poae_KC936115 'Epichloe schardlii C1_HM138504' 'Epichloe schardlii C2_HM138505' Epichloe_sibirica_GQ421698 Epichloe_sibirica_GQ421706 Epichloe_sibirica_GQ421707 'Epichloe siegelii C1_AF308138' 'Epichloe siegelii C2_AF308139' 'Epichloe sinica C1_EU409305' 'Epichloe sinica C1_EU409306' 'Epichloe sinica C1_EU409307' 'Epichloe sinica C2_EU409308' 'Epichloe sinica C2_EU409309' 'Epichloe sinica C2_FJ189479' 'Epichloe sinofestucae C1_FJ211211' 'Epichloe sinofestucae C1_FJ211213' 'Epichloe sinofestucae C1_FJ211215' 'Epichloe sinofestucae C1_FJ211217' 'Epichloe sinofestucae C2_FJ211212' 'Epichloe sinofestucae C2_FJ211214' 'Epichloe sinofestucae C2_FJ211216' 'Epichloe sinofestucae C2_FJ211218' Epichloe_sp._PT.2017a_KX685660_57v16 Epichloe_sp._PT.2017a_KX685661_57v17 Epichloe_sp._PT.2017a_KY285031_141v4 Epichloe_sp._PT.2017a_KY285032_141v24 Epichloe_sp._PT.2017a_KY285033_99v27 Epichloe_sp._PT.2017a_KY285034_99v1 Epichloe_stromatolonga_EU526824 Epichloe_stromatolonga_EU526825 Epichloe_sylvatica_JF718479 Epichloe_sylvatica_KC936106 Epichloe_sylvatica_KC936107 Epichloe_sylvatica_KC936108 Epichloe_sylvatica_KC936109 Epichloe_sylvatica_L78278 Epichloe_sylvatica_L78291 Epichloe_sylvatica_pollinensis_JF718439 'Epichloe tembladerae C1_AF323389' 'Epichloe tembladerae C1_AF457496' 'Epichloe tembladerae C1_AY707695' 'Epichloe tembladerae C1_AY707699' 'Epichloe tembladerae C1_AY707701' 'Epichloe tembladerae C1_AY707711' 'Epichloe tembladerae C1_AY707719' 'Epichloe tembladerae C2_AF323390' 'Epichloe tembladerae C2_AF457497' 'Epichloe tembladerae C2_AY707721' 'Epichloe tembladerae C2_AY707725' 'Epichloe tembladerae C2_AY707727' 'Epichloe tembladerae C2_AY707737' 'Epichloe tembladerae C2_AY707745' Epichloe_typhina_AF250753 Epichloe_typhina_AM490796 Epichloe_typhina_EU375739 Epichloe_typhina_EU375740 Epichloe_typhina_KC936103 Epichloe_typhina_KC936104 Epichloe_typhina_KC936105 Epichloe_typhina_KC936110 Epichloe_typhina_KC936111 Epichloe_typhina_KC936112 Epichloe_typhina_KC936116 Epichloe_typhina_KC936118 Epichloe_typhina_KC936124 Epichloe_typhina_KC936127 Epichloe_typhina_KC936142 Epichloe_typhina_L78277 Epichloe_typhina_L78284 Epichloe_typhina_L78288 Epichloe_typhina_X52616 Epichloe_typhina_poae_var._aonikenkana_AY707694 Epichloe_typhina_poae_var._canariensis_AF176266 Epichloe_typhina_poae_var._huerfana_AF457493 'Epichloe typhina poae_AF250757' 'Epichloe typhina poae_AY163832' 'Epichloe typhina poae_JQ756453' Epichloe_uncinata_L06946 Epichloe_yangzii_DQ134039 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M52507] TITLE Epichloe_tub; LINK TAXA = TaxaForAnalysisStep25669; DIMENSIONS NCHAR=467; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Epichloe_amarillans_AF457478 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--GTTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_amarillans_L06958 ----------GTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_amarillans_L06959 ----------GTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--GTTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_aotearoae_AF323371 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGCCATC--ATGCTAATCTATGTGACAG Epichloe_aotearoae_GQ422364 --------------------------------------------------------------GGTG----TTGAGCCCCCCTGATTTCGTACCCC-----GCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCCGGAGATGAGA---C------------------------------------------------------------ 'Epichloe australiensis C1_AF323379' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe australiensis C2_AF323381' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_baconii_L06961 ----------GTTCAAACTCCCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCACCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCTTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAAAGAAC--------GAAA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_baconii_L78270 ------GTAAGTTCAAGCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCAAAC----GAC-GGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGGAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_baconii_L78279 ------GTAAGTTCAAACTCCCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCTCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCTTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAAAGAAC--------GAAA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_brachyelytri_AF062427 --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGAACCCC-----GCCGAGTGCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTCATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGGAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACACACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_brachyelytri_L78271 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGAACCCC-----GCCGAGTGCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTCATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGGAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AF457488 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGACAAAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTTTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AY033369 -----------------------------------GGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGACAAAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTTTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AY033371 -----------------------------------GGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGCAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AY137612 --------AAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATTT----GAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_GU325782 ------GTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCTCAATGGAC-AGTCGTGATGAGAGGCGGCCCGAGAC---AAAAAAATTAACGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_JN819475 ------GTAAGTTCAACTTCTCTG---TTTGTCTCGAGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_JN819476 ----------GTTCAACTTCTCTG---TTTGTCTCGGGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_JN819479 ------GTAAGTTCAACTTCTCTG---TTTGTCTCGGGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCCAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_JN819485 ------GTAAGTTCAACTTCTCTG---TGTGTCTCGGGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCCAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_L78289 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATAACACATG-GAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_L78290 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTTGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe bromicola NI_201308' GAGAAAGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCC-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe cabralii C1_AY707746' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---C-GAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe cabralii C2_AY707720' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-GGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGGAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe canadensis C1_JN886778' -----------TTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCTGACCGAGAC------AAAATGAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG 'Epichloe canadensis C2_JN886777' -----------TTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGACAAGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG 'Epichloe chisosa C1_AF457470' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAACGACAGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG 'Epichloe chisosa C2_AF457471' -----------------TTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATTAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe chisosa C3_AF457472' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAG-ACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_clarkii_L78281 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCTCCCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-ACAAAAG-TCTCCATTGAGC----TACATACTG-C-CCTGGAGATGGGG---CGGGAGAAGATG--------GAAA--GGAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe coenophiala C1_L06964' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe coenophiala C2_L06951' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TG-TTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe coenophiala C3_X56847' GAGATTGTAAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CTCTCT-CCTCGACGCGTTCCGGTG----TTGAGCCCCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GGGC-GAGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe danica C1_JF718475' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGCAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe danica C2_JF718476' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTCATCTATGTGACAG 'Epichloe disjuncta C1_JF718437' ----------------CCCCTCTG---TTTGTCTTGGGGG-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGATTGCGGTA-TTCGAGAATTG-TAGCTGACCTTTTTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--C-----GAAAACTCACATTTGTTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C1_JF718440' ----------------CCCCTCTG---TTTGTCTTGGGGG-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGATTGCGGTA-TTCGAGAATTG-TAGCTGACCTTTTTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--C-----GAAAACTCACATTTGTTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C1_JF718469' ----------------CCCCTCTG---TTTGTCTTGGGGG-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGATTGCGGTA-TTCGAGAATTG-TAGCTGACCTTTTTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--C-----GAAAACTCACATTTGTTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C2_JF718438' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG 'Epichloe disjuncta C2_JF718441' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C2_JF718470' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACTCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG Epichloe_elymi_AF250743 --------AAGTTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG Epichloe_elymi_L06962 ------GTAAGTTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG Epichloe_elymi_L78273 ------GTAAGTTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGACAAGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG Epichloe_festucae_AF250747 -----------------------------------GGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_L06955 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_lolii_AY865628 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_lolii_KC936144 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_lolii_L20304 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGGA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-ACAAAAG-TCTCCATTGAGC----TACATACTG-C-CCTGGAGATGGGG---CGGGAGAAGATG--------GAAA--GGAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe funkii C1_AF457489' -----------------CGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG 'Epichloe funkii C2_AF457490' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_gansuensis_EF422756 ------GTAAGTTTGACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATC---AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATAAGA---CGGAAAGAGAACGAAAAAAAAAAAAGAAGAAGGTTTTTTC--ATGCTAATCTATGTGACAG Epichloe_gansuensis_EF422757 ------GTAAGTTTGACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATC---AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATAAGA---CGGAAAGAGAACGAAAAAAAAAAAAGAAAAAGGTTTTTTC--ATGCTAATCTATGTGACAG Epichloe_gansuensis_KC936101 ---------------------------TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACTTG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATC---AAAAAG-TCTCCATTGAGC----TGTATACCG-C-TCTGGAGATAAGA---CGGAAAGAGAACGAAAAA--AAAA--AAAAAAGTTTTTTC--ATGCTAATCTATGTGACAG Epichloe_glyceriae_L78275 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCC----CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAAAGATTGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTTCTTCCTCTCTTCTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAGC----GAC-AGGCACCAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TATATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATA--ATGCTAATCTATGTGACAG Epichloe_glyceriae_L78276 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCC----CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAAAGATTGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTTCTTCCCCTCTTCTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAGC----GAC-AGGCACCAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TATATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATA--ATGCTAATCTATGTGACAG 'Epichloe guerinii C1_EF422754' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCTCCCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG 'Epichloe guerinii C2_EF422755' ------GTAAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe hordelymi C1_AF457486' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAGGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGG---CGGGAAAAGATG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe hordelymi C2_AF457487' -----------------TTCTGTG---TTTGTATTGGGGA-TCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTCCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATCAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGT--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_inebrians_AF457494 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AATCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTATTTCGAGAACTG-TAGCTGATC--CATTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCAGAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAAAAAAAA--AAAAAAGTGTTGTC--ATGCTAATCTATGTGACAG 'Epichloe liyangensis C1_HM475156' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTGTTGATTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGATTTCGGAAAGAGAAC----------GA--TGAAAAGTGTT------------------------ 'Epichloe liyangensis C1_HM475157' ------GTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTT------------------------ 'Epichloe liyangensis C2_HM475160' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe liyangensis C2_HM475161' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----CACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe melicicola C1_AF323384' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-G-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe melicicola C2_AF323386' -----------------CTCTCTG---TTTGTCTTGGGG--CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGCCATC--ATGCTAATCTATGTGACAG Epichloe_mollis_AF457469 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG-CCCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATCAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCTTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAAAA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176268' --------AAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GAGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176269' --------AAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GAGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176270' --------AAGTTCAAA--CTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176271' --------AAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAATCTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAAA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C2_AF176272' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe occultans C2_AF176274' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe occultans C2_AF176275' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAACCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe occultans C2_AF176276' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAACCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe pampeana C1_FJ147181' ----------------------------------------------------------------------------------------------------------------------G-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GA--------------------------------- 'Epichloe pampeana C2_FJ147188' ----------------------------------------------------------------------------------------------------------------------G-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC----TTT---------GCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCT-------------- Epichloe_poae_KC936113 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTTTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_poae_KC936114 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGAAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_poae_KC936115 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe schardlii C1_HM138504' ------------------------------------------------CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe schardlii C2_HM138505' ------------------------------------------------CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sibirica_GQ421698 ------GTAAGTTTGACCTCTCTG---GTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG Epichloe_sibirica_GQ421706 ------GTAAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG Epichloe_sibirica_GQ421707 ------GTAAGTTTGACCTCTCTG---TTTGTCTCGGGGA-ACCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAACTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe siegelii C1_AF308138' -------------------------------------GGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGCAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe siegelii C2_AF308139' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe sinica C1_EU409305' GAGATTGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinica C1_EU409306' GAGATTGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinica C1_EU409307' GAGATTGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinica C2_EU409308' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGGATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--A------------------ 'Epichloe sinica C2_EU409309' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTAT---------------------- 'Epichloe sinica C2_FJ189479' ------------TCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGCCC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAGGTGTTATC--ATGCTA------------- 'Epichloe sinofestucae C1_FJ211211' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCCCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinofestucae C1_FJ211213' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATG---------------- 'Epichloe sinofestucae C1_FJ211215' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinofestucae C1_FJ211217' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATA---------------- 'Epichloe sinofestucae C2_FJ211212' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--AT----------------- 'Epichloe sinofestucae C2_FJ211214' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe sinofestucae C2_FJ211216' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--AT----------------- 'Epichloe sinofestucae C2_FJ211218' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--AT----------------- Epichloe_sp._PT.2017a_KX685660_57v16 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCTGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTGATTT-GGGCAGAGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KX685661_57v17 --------AAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGCAGAGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KY285031_141v4 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCTGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_sp._PT.2017a_KY285032_141v24 --------AAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG---CCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGCAGAGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KY285033_99v27 ---------AAGTTGACCTCTCTG----TTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCCAGT----GTTAA--GCCCTGATTTCGTACCCC-----GCCGGGCCCGAGCACGACG-TACACGCCCGCGGCACAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGCAGAGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KY285034_99v1 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCTGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_stromatolonga_EU526824 --------AAGTTCAACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGGC------AAAATTAATGCATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTCCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTAGAAC----GAA-AGGCACAAACA--GCATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TTTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_stromatolonga_EU526825 --------AAGTTCAACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGGC------AAAATTAATGCATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTCCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTAGAAC----GAA-AGGCACAAACA--GCATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TTTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_sylvatica_JF718479 ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTCATCTATGTGACAG Epichloe_sylvatica_KC936106 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CAGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936107 ------GTGAGTTCAACCTCCCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936108 ------GTGAGTACAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936109 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_L78278 ------GTGAGTTCATTCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_L78291 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCCCATCTATGTGACAG Epichloe_sylvatica_pollinensis_JF718439 ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGACTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG 'Epichloe tembladerae C1_AF323389' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AF457496' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707695' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707699' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707701' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707711' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707719' ------GTAAGTTCAACCTCTCTGGCCTTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C2_AF323390' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAGTTCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AF457497' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707721' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707725' --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-CTCCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707727' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707737' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707745' -------TGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_AF250753 -----------TTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCAAAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_AM490796 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----ATGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGAACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_EU375739 ------GTGAGTTCAAC--CTCTG---TTTGTCTTGGGGACCCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TATTT---------TCTTTGCCTCTAGCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAGC-------GGAG--AAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_EU375740 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGACCCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TATTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAGC-------GGAG--AAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936103 ------GTGAGTCCAACCTCTCTG---TTTGTCTTGGGGA-CCCTCT-CCTCGACGCGTTCCCGTG----TCGAG--CCCCTGATTTCGTACCCCGCCGAGCCGAGCCCGGCCACGACG-TGCAT-------GCCCAACGGACAAGTCGTGATGAGAGGCGGGCCGAGAC------AACATTGATGAATGCTGTA-TTCGAAAACCG-TAGCTGACCTTTTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCTAAAAAAAG-TCCCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGATG--------GAAA--GAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936104 ------GTGAGTCCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCCGCCGAGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGGCCGAGAC------AACATTGATGAATGCTGTA-TTCGAAAACCG-TAGCTGACCTTTTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCCCCATTGAGC----TACATACCG-C-CCTGGAGATTGGA---CAGGAAAAGATG--------GAAA--GAAAAAGTGCCATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936105 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936110 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936111 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG Epichloe_typhina_KC936112 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGACTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG Epichloe_typhina_KC936116 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAACCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TATTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAGATA--ACATG-AAAAACTCACATTGACTTGGGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGG---CGGGAAAAGATG--------GAAA--GAAAAAGTGTCATC--ATGCTAACCTATGTGACAG Epichloe_typhina_KC936118 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAACCT-AAAAAAG-TCCCCATTGAGC----TATATACCG-C-CCTGGAGATGGGG---CGGGAAAAGATG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936124 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCTATTGAGC----TACATACCG-C-CCCGGAGATGGGA---CGGGAAAAGAAG--------CAAA--TAAAACGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936127 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TATTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-T-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936142 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTAAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_L78277 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGGTGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCGCC-CCTGGAGACGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_L78284 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGATGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_L78288 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAACGCGGTA-TTCGAAAACCG-TAGCTGACT---TTTT---------TATTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GACAAGGCACAGATA--ACATG-AAAAACTCACATTGACTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_X52616 GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-ACAAAAG-TCTCCATTGAGC----TACATACTG-C-CCTGGAGATGGGG---CGGGAGAAGATG--------GAAA--GGAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_poae_var._aonikenkana_AY707694 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCTT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-T-GCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_poae_var._canariensis_AF176266 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGG-------------------------TCTCCATTGAGC----TACATACCG-C-CCTGAAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_poae_var._huerfana_AF457493 --------------------------------------GA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe typhina poae_AF250757' --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe typhina poae_AY163832' -----------------------------TGTCTTGGGTA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTTTCATC--ATGCTAATCTATGTGACAG 'Epichloe typhina poae_JQ756453' -------------------------------------------CCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_uncinata_L06946 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_yangzii_DQ134039 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTGTTGATTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGATTTCGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG ; END; [ The following blocks are output data for analysis step 25669 ] BEGIN TREES; TITLE Epichloe_tub; LINK TAXA = TaxaForAnalysisStep25669; TREE PAUP_1 = [&R] (((Epichloe_inebrians_AF457494:0.013622,(Epichloe_gansuensis_KC936101:0.005797,(Epichloe_gansuensis_EF422756:0.002632,Epichloe_gansuensis_EF422757:0.0):0.002595):0.008142):0.002013,(Epichloe_sp._PT.2017a_KY285033_99v27:0.036803,(('Epichloe guerinii C2_EF422755':0.0,(Epichloe_sp._PT.2017a_KY285032_141v24:0.0,Epichloe_sp._PT.2017a_KX685661_57v17:0.0):0.0):0.00263,(Epichloe_sibirica_GQ421698:0.002647,(Epichloe_sibirica_GQ421706:0.0,Epichloe_sibirica_GQ421707:0.005313):0.0):0.0):0.0):0.023163):0.02766,(((('Epichloe funkii C1_AF457489':0.0,('Epichloe canadensis C2_JN886777':0.0,(Epichloe_elymi_L78273:0.0,(Epichloe_elymi_AF250743:0.0,Epichloe_elymi_L06962:0.0):0.0):0.0):0.0):0.011313,((Epichloe_glyceriae_L78275:0.002724,Epichloe_glyceriae_L78276:0.0):0.020767,('Epichloe disjuncta C1_JF718469':0.0,('Epichloe disjuncta C1_JF718437':0.0,'Epichloe disjuncta C1_JF718440':0.0):0.0):0.036397):0.004954):0.0,(('Epichloe chisosa C2_AF457471':0.005934,(Epichloe_bromicola_GU325782:0.008462,((Epichloe_bromicola_JN819476:0.0,(Epichloe_bromicola_JN819475:0.00281,(Epichloe_bromicola_JN819479:0.0,Epichloe_bromicola_JN819485:0.002819):0.00281):0.0):0.005636,('Epichloe hordelymi C2_AF457487':0.01554,((Epichloe_bromicola_AY137612:0.002777,'Epichloe bromicola NI_201308':0.008243):0.0,('Epichloe liyangensis C1_HM475157':0.0,('Epichloe sinica C1_EU409307':0.0,('Epichloe sinica C1_EU409305':0.0,'Epichloe sinica C1_EU409306':0.0):0.0):0.0):0.00274):0.008269):0.0):0.0):0.002684):0.008152,(('Epichloe occultans C2_AF176274':0.0,('Epichloe occultans C2_AF176272':0.0,('Epichloe occultans C2_AF176275':0.0,'Epichloe occultans C2_AF176276':0.0):0.002789):0.0):0.016034,(Epichloe_bromicola_L78289:0.006708,((Epichloe_bromicola_AF457488:0.0,Epichloe_bromicola_AY033369:0.0):0.002889,('Epichloe sinofestucae C1_FJ211215':0.0,(Epichloe_bromicola_L78290:0.002768,('Epichloe sinofestucae C1_FJ211211':0.002724,(('Epichloe sinofestucae C1_FJ211217':0.001272,'Epichloe liyangensis C1_HM475156':0.00286):0.001545,(Epichloe_yangzii_DQ134039:0.0,('Epichloe sinofestucae C1_FJ211213':0.0,('Epichloe danica C1_JF718475':0.0,('Epichloe siegelii C1_AF308138':0.0,Epichloe_bromicola_AY033371:0.0):0.0):0.002881):0.0):0.0):0.0):0.0):0.0):0.0):0.004366):0.0):0.007738):0.016334):0.0,((((Epichloe_amarillans_AF457478:0.0,Epichloe_amarillans_L06959:0.0):0.008251,('Epichloe chisosa C1_AF457470':0.002804,('Epichloe canadensis C1_JN886778':0.002725,Epichloe_amarillans_L06958:0.0):0.002725):0.0):0.007447,('Epichloe tembladerae C1_AF323389':0.006616,((Epichloe_stromatolonga_EU526824:0.0,Epichloe_stromatolonga_EU526825:0.0):0.028896,((Epichloe_mollis_AF457469:0.008446,('Epichloe cabralii C2_AY707720':0.0,Epichloe_baconii_L78270:0.005388):0.008083):0.0,(('Epichloe australiensis C1_AF323379':0.002789,'Epichloe coenophiala C2_L06951':0.0):0.004089,(((Epichloe_baconii_L06961:0.002722,Epichloe_baconii_L78279:0.0):0.022197,('Epichloe pampeana C1_FJ147181':0.0,('Epichloe coenophiala C3_X56847':0.002552,('Epichloe occultans C1_AF176270':0.0,('Epichloe occultans C1_AF176271':0.005392,('Epichloe occultans C1_AF176268':0.0,'Epichloe occultans C1_AF176269':0.0):0.002683):0.0):0.005482):0.021638):1.1042E-8):0.00367,(Epichloe_festucae_lolii_KC936144:0.0,(Epichloe_festucae_lolii_AY865628:0.0,('Epichloe tembladerae C1_AF457496':0.0,('Epichloe funkii C2_AF457490':0.0,('Epichloe melicicola C1_AF323384':0.002796,(Epichloe_festucae_L06955:0.0,('Epichloe tembladerae C1_AY707711':0.0,('Epichloe tembladerae C1_AY707701':0.0,('Epichloe tembladerae C1_AY707699':0.0,('Epichloe tembladerae C1_AY707695':0.0,('Epichloe tembladerae C1_AY707719':0.0,(Epichloe_festucae_AF250747:0.0,'Epichloe siegelii C2_AF308139':0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.002312):3.61E-4):0.0):0.004163):0.0):0.003783):0.001691):0.0):0.005095):0.025149,(((Epichloe_brachyelytri_AF062427:0.002791,Epichloe_brachyelytri_L78271:0.0):0.014238,(Epichloe_aotearoae_GQ422364:0.003957,(Epichloe_aotearoae_AF323371:0.0,'Epichloe melicicola C2_AF323386':0.0):0.0):0.011693):0.0,(((Epichloe_sylvatica_L78278:0.005594,(Epichloe_sylvatica_KC936108:0.002794,(Epichloe_sylvatica_KC936107:0.002784,(Epichloe_typhina_KC936110:0.0,(Epichloe_sylvatica_KC936106:0.002784,(Epichloe_sylvatica_KC936109:0.0,('Epichloe sinica C2_EU409308':0.002833,'Epichloe sinica C2_EU409309':0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.002742,((Epichloe_typhina_KC936105:0.0,(Epichloe_sylvatica_L78291:0.00278,('Epichloe danica C2_JF718476':0.002886,Epichloe_sylvatica_JF718479:0.0):0.0):0.002788):0.002779,(('Epichloe hordelymi C1_AF457486':0.005136,((Epichloe_clarkii_L78281:0.002735,(Epichloe_festucae_lolii_L20304:0.002735,Epichloe_typhina_X52616:0.0):0.0):0.011154,(Epichloe_typhina_KC936116:0.019428,(Epichloe_typhina_KC936118:0.005499,(Epichloe_typhina_KC936103:0.008163,Epichloe_typhina_KC936104:0.008254):0.014082):0.003054):0.0):0.002982):0.005385,(Epichloe_typhina_KC936124:0.013634,((Epichloe_typhina_KC936127:0.002688,Epichloe_typhina_L78288:0.014037):0.005666,((Epichloe_typhina_EU375739:0.0,Epichloe_typhina_EU375740:0.0):0.011383,((Epichloe_typhina_AF250753:0.002793,Epichloe_typhina_L78277:0.005481):0.002747,('Epichloe guerinii C1_EF422754':0.0,Epichloe_typhina_KC936142:0.002732):0.0):0.0):0.0):0.007425):0.004928):0.007679):0.0):0.011198,(('Epichloe disjuncta C2_JF718441':0.017877,((Epichloe_sylvatica_pollinensis_JF718439:0.011699,Epichloe_typhina_KC936112:0.0):0.002778,(Epichloe_typhina_KC936111:0.0,('Epichloe disjuncta C2_JF718438':0.0,'Epichloe disjuncta C2_JF718470':0.002882):0.0):0.0):0.005618):0.008539,(('Epichloe australiensis C2_AF323381':0.0,'Epichloe sinofestucae C2_FJ211214':0.0):0.002809,((('Epichloe typhina poae_AY163832':0.009579,'Epichloe schardlii C1_HM138504':0.0):0.0,(Epichloe_typhina_L78284:0.002907,('Epichloe typhina poae_AF250757':0.0,('Epichloe chisosa C3_AF457472':0.0,('Epichloe sinofestucae C2_FJ211218':0.0,('Epichloe sinofestucae C2_FJ211216':0.0,('Epichloe sinica C2_FJ189479':0.006118,'Epichloe sinofestucae C2_FJ211212':0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0,(Epichloe_typhina_AM490796:0.011438,(((Epichloe_poae_KC936113:0.002905,(Epichloe_typhina_poae_var._canariensis_AF176266:0.0,Epichloe_poae_KC936114:0.0):0.002907):0.0,('Epichloe coenophiala C1_L06964':0.0,('Epichloe cabralii C1_AY707746':0.0,(Epichloe_uncinata_L06946:0.0,(Epichloe_poae_KC936115:0.0,('Epichloe pampeana C2_FJ147188':0.004199,'Epichloe schardlii C2_HM138505':0.0):0.0):0.0):0.0):0.0):0.0):0.0,((Epichloe_typhina_poae_var._aonikenkana_AY707694:0.002923,('Epichloe liyangensis C2_HM475160':0.0,('Epichloe liyangensis C2_HM475161':0.002847,(Epichloe_typhina_poae_var._huerfana_AF457493:0.0,'Epichloe typhina poae_JQ756453':0.0):0.0):0.0):0.0):0.0,((Epichloe_sp._PT.2017a_KY285034_99v1:0.0,(Epichloe_sp._PT.2017a_KY285031_141v4:0.0,Epichloe_sp._PT.2017a_KX685660_57v16:0.00291):0.0):0.00582,('Epichloe tembladerae C2_AF323390':0.003039,('Epichloe tembladerae C2_AY707737':0.0,('Epichloe tembladerae C2_AY707727':0.0,('Epichloe tembladerae C2_AY707721':0.0,('Epichloe tembladerae C2_AY707745':0.0,('Epichloe tembladerae C2_AF457497':0.0,'Epichloe tembladerae C2_AY707725':0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.005843):0.002836):0.002828):0.005493):0.002751):0.0):0.005455):0.01398):0.005506):0.005935):0.02766); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr120849] END;