#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 1:26 GMT TreeBASE (cc) 1994-2008 Study reference: Lee B., & Hur J. 2020. A new lichenized fungus, Orientophila corticola, from South Korea, with a key to the genus. Mycosphere, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S25661] [ The following blocks are input data for analysis step 25893 ] BEGIN TAXA; TITLE TaxaForAnalysisStep25893; DIMENSIONS NTAX=22; TAXLABELS Athallia_scopularis_KC179340 Calogaya_zoroasteriorum_KY749090 Calogaya_zoroasteriorum_KY749091 Calogaya_zoroasteriorum_KY749092 Calogaya_zoroasteriorum_KY749105 Flavoplaca_microthallina_KC179368 Lazarenkoella_zoroasteriorum_KT456215 Lazarenkoella_zoroasteriorum_KT456216 Orientophila_corticola_MN687909 Orientophila_loekoesii_KC179374 Orientophila_loekoesii_KJ133472 Orientophila_loekoesii_KJ133473 Orientophila_sp_KC179372 Orientophila_sp_KC179373 Orientophila_sp_LC490371 Orientophila_subscopularis_KC179375 Orientophila_subscopularis_KJ133474 Orientophila_subscopularis_KJ133475 Orientophila_subscopularis_KJ133476 Orientophila_subscopularis_LC490368 Oxneriopsis_oxneri_KC179443 Oxneriopsis_oxneri_KY614430 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M53309] TITLE Orientophila_ITS_sequences; LINK TAXA = TaxaForAnalysisStep25893; DIMENSIONS NCHAR=610; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Athallia_scopularis_KC179340 --------------CCGAGAGAGGGACG-G-----CCCACGGCTGCTCCC--TGGGGGGCCC-CGCCCCCCGTCTCT-TCAACCCTGTG-CGTATCAACCTCTG-TTGCCTCGGCGAGCGGCGGGGTGCTCC---GCGCCCCGGCCCCGG--TCTC-GGCCGGTGAGTTCTCGTCCGAGGCCCAAGCCCATTCTGT-TCA-AGTGACGTCCGAGTCCACGATTAAATC-AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTCCGCGGCCCC--TCCCGGGGGGCGGCGCGCCCGTAAGTTAGTGGCGGCCCAGGGAGACTTCAAGCGCAGTAGA-ACCTTTCGCTTTCGAAGTGTC---GTCTGCGGCCCGGCCGTAAAACCCCCCATCTTTCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749090 --------------CCGAGAGGGATATGCGC----CTCACGGCCATGTCC--CGGGGGGTTC-CGCCCCC-GTCTCT-TCAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATT-GCGCCCGGGCCCCGG---CCTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGTGATGTCTGAGTGTACCGATTAA--AA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTTCCCGGGGATGTGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749091 --------------CCGAGAGGGATATGCGC----CTCACGGCCATGTCC--CGGGGGGTTC-CGCCCCC-ATCTCT-TAAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATT-GCGCCCGGGCCCCGG---CCTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGAGATGTCTGAGTGTACCGATTAA--AA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTTCCCGGGGATGTGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749092 --------------CCGAGAGGGATACGCGC----CTCGCGGCCATGTCC--CGGGGGGTTC-CGCCCCC-ATCTCT-TCAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATT-GCGCCCGGGCCCCGG---CTTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGTGACGTCTGAGTGTACCGATTAA--AA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTTCTCGGGGATGTGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749105 --------------CCGAGAGGGATATGCGC----CTCGCGGCCATGTCC--CGGGGGGTTC-CGCCCCC-ATCTCT-TCAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATTTGCGCCCGGGCCCCGG---CCTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGTGACGTCTGAGTGTACCGATTAA--AAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGTGTCCCC--GTTTCCGGGGATATGTGCCCGTAAACCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Flavoplaca_microthallina_KC179368 --------------CCGAGAGGGGGACGTGCGGTTGCTTGCGGCCCACGCCCCGGGGGGTTC-CCCCTCT--ACTCT-TTAACCCTATGCTTTACCAACCTCTG-TTGCTTCGGCGAGCGCCGGGGGG-CCTCGTGCGCCCCGGCCCCGG---CTTCGGTCGGTGAGTTCTCGCCGAAGACCCAATTTCAATCCGT-TTGCAGCCCCGTCCGAGCGCACCGATAAATCCAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTATGCTTGGTATTGGGCGTTCGCTTCCCC--GCTTCGGGGGTGGCGCGCCTGTAAATTAGTGGCGGCCTCGGGGGACCTCAAGCGTAGTAGAACCTTTTCGCTTGGAAGGTGCC---ACCCGGGGCCCGGCCGTCAACCTCTCTATCCATCAA-TGA------------------------------------------------- Lazarenkoella_zoroasteriorum_KT456215 -----------------------ATGTGCGC----TTTACGGCCATGTCC--CGGGGGGTTTACGCCCCC-ATCATTATCAACCCT-TG-CCTATCTACCTCTGATTGCTTCGGCGAGCGCCCGGGTG-C--TTTGCGCCCGGGCCCCGG---CTTCAG?CGGTGCGCTCTCGCCGGAGGC-CATCTTAAATCTGT-CTGTAGGGTCGTCTGAGTGTACCGATTAA--AA-ACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTCCTCGGGGATGCGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGACGTCT----GCCTGTGGCCCTGCCATTAAACCCC-CAATTTCCAA-TGATT----------------------------------------------- Lazarenkoella_zoroasteriorum_KT456216 -----------------------ATGTGCGC----TTTACGGCCATGTCC--CGGGGGGTTTACGCCCCC-ATCATTATCAACCCT-TG-CCTATCTACCTCTGATTGCTTCGGCGAGCGCCCGGGTG-C--TTTGCGCCCGGGCCCCGG---CTTCAG?CGGTGCGCTCTCGCCGGAGGC-CATCTTAAATCTGT-CTGTAGGGTCGTCTGAGTGTACCGATTAA--AA-ACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTCCTCGGGGATGCGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGACGTCT----GCCTGTGGCCCTGCCATTAAACCCC-CAATTTCCAA-TGATT----------------------------------------------- Orientophila_corticola_MN687909 ------------------------GGCGTG-----GCTCCGGTCACGCCTCGCGGGGGGCAG-CGCCCCC-AACTCT-TCAACCCCGTG-TCTACCACCCTCTG-TTGCTTCGGCGAGCGTCGGGGCGCCC---GGCGCCGCGGCCCCGG--CCATTGGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TTCTGT-TTTTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAACTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTTGGAGATGTC---GCCTGCGGTCCGGCCGTAAAAGAACGCAAACCTCAA-TGATCGACCTCG---------------------------------------- Orientophila_loekoesii_KC179374 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTG-CGCCCCC-AACTCT-TCATCCCTGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGT-TCTCAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAG{AG}TGTC---GCCTGCGGTCCGGCCGGAAAACAACGCAAACCTCAA-TGA------------------------------------------------- Orientophila_loekoesii_KJ133472 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGGTACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCAGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGT-TCTCAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGAGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCG?TCCGGCCGGAAAACAACGCAAACCTCAA-TGATTG---------------------------------------------- Orientophila_loekoesii_KJ133473 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGT-TCTCAGTGACGTCCGAGCACACATTCGAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGGAAAACAACGCAAACCTCAA-TGATTG---------------------------------------------- Orientophila_sp_KC179372 --------------CCGAAAGGGAGGCGCG-----GCTCCGGCCGGGCCT--CGAGGGGCCT-CGCCCTG-AACCCT-TCATCCCTGTG-TCTACCGTCCTCTG-TTGCTTTGGCGAGCGTCGGGGCG-----------TTCGAC---------------------GC-CTCGCCAGAAGCCCAACCTA-TTCTGT-TTTC-GTGGCGTCCGAGCACATATTGGAATTGAAGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCACCCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CCTCCCGGGGAGACGTGCCCGCAAACCAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CTGTTTCGCTTTCGAGGTGTC---GCCTGCGAACCGGCCGTAAAACCCCTCAAACTTCAA-TGA------------------------------------------------- Orientophila_sp_KC179373 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCGCGCCC-CCGGGGGGCTG-CACCCCC-AACTCT-TCATCCCTGTG-TCTACCCTCCTCTG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGCGCCTCGGCCCCGG--TCCT-GGCCGGTGAGT-CTC-CCAGAAGCCCAACCCA-CTCTGT-ACTCAGTAACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CCGGGCGAGACGTGCCCGCAAAATAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTTGGAGATGTC---GCCTGTGGTCCGGCCGTGAAACAACGCAAACCTCAAATGA------------------------------------------------- Orientophila_sp_LC490371 ----------------------GGGGCCTG-----GTTCCGGCCACGCCTCGCGGGGCTC---CGCCCCG-AACTCT-TCAACCCCGTG-TCTACCGTTCTCTG-TTGCTTCGGCGAGCGTCGGGGCGTCT---GGCGCCTCGGCCTCGG--TCAC-GGCCGATGAGT-CTCGCCAGAAGCCCAACCCA-TTCTGT-TCTTAGTGGCGTCCGAGCACATATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTACTGGGCGCTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATCAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTCGGAGATGTC---GCCTGCGATCCGGCCGTAAAACCCCACAAACTTCAA-TGATTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA----------- Orientophila_subscopularis_KC179375 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTG-CGCCCCC-AACTCT-TCATCCCTGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGGGGTCGC-GGCCGGTGAGC-CTCGCCAGAAGCCCAACCCA-TTCTGT-TCTTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGCATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGACGTC---GCCTGCGGTCCGGCCGTAAAACAACACAAACTTCAA-TGA------------------------------------------------- Orientophila_subscopularis_KJ133474 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGGGGTCGC-GGCCGGTGAGC-CTCGCCAGAAGCCCAACCCA-TTCTGT-TCTTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCCCAAGCTCTGCTTGGCATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTCTGGAGACGTC---GCCTGCGGTCCGGCCGTAAAACAACACAAACTTCAA-TGATTG---------------------------------------------- Orientophila_subscopularis_KJ133475 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCACCAGAAGCTCAACCCA-TCCTGT-TCTCAGCGACGTCCGAGCACACATTCAAACTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGAGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCAA-TGATTG---------------------------------------------- Orientophila_subscopularis_KJ133476 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TCCTGT-TCTCAGCGACGTCCGAGCACACATTCAAACTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGAGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCAA-TGA------------------------------------------------- Orientophila_subscopularis_LC490368 ----------------------AAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTG-CGCCCCC-AACTCT-TCATCCCTGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TCCTGT-TCTCAGCGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCGA-TGATTGACCTCGGATCAGGCAGGGATACCCGCTGAACTTAA----------- Oxneriopsis_oxneri_KC179443 -----------------------------ACGAGAGGGGGGGCCTTGAGCCCCCAGGGGCTC-CCTCCCCGTACCTT-TCCACCCTGTG-TTTACCTTCCATTG-TTGCTTTGGCGGGCCCCGGGGGTTTTTCCCCGGCGTAGGTCCCTTTACGGGGTCCCGCGAAGTGCCCGTCAGAGGCCCATCTAAATTCCGTATATTAGTGAAATCTGAGTCTA--ATTAAAT--AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGAATTCCGGAGGGCATGCCTGTTCGAGCGTCATTAAACCCCTCAAGCTTGGCTTGGTATTGGGCGTTCGCTCCCCCGACTCCAGGGGGCGGCGTGCCCGAAATCCAGTGGCGGTCCAGGAAGACTTCAAGCGCAGTAAA-ACTTTTCGCTTTAGAAGCTTTTCAACCTGTGACTCGGCCAGTGAACCCTTCTATTTTCAA--GAA------------------------------------------------ Oxneriopsis_oxneri_KY614430 ---------------CGGAAGGATCATTAACGAGAGGGGGGGCCTTGAGCCCCCAGGGGCTC-CATCCCCGTGCCTT-TCCACCCTGTG-TTTACCTTCCATTG-TTGCTTTGGCGGGCCCCGGGGGTTTTTCCCCGGCGTAGGTCCCTTTACGGGGTCC-GCGAAGTGCCCGTCAGAGGCCCATCTAAATTCCGTATATTAGTGAAATCTGAGTCTA--ATTAAAT--AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGAATTCCGGAGGGCATGCCTGTTCGAGCGTCATTAAACCCCTCAAGCTTGGCTTGGTATTGGGCGTTCGCTCCCCCGACTCCAGGGGGCGGCGTGCCCGAAATCCAGTGGCGGTCCAGGAAGACTTCAAGCGCAGTAAA-ACTTTTCGCTTTAGAAGCTTTTCAACCTGTGACTCGGCCAGTGAACCCTTCTATTT-CAA--GAATGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATA ; END; [ The following blocks are output data for analysis step 25893 ] BEGIN TREES; TITLE Orientophila_ITS_ML_analysis; LINK TAXA = TaxaForAnalysisStep25893; TREE Imported_tree_0 = [&R] ((Oxneriopsis_oxneri_KC179443:0.0018819258644490664,Oxneriopsis_oxneri_KY614430:0.0017971537749880363):0.18989064160848876,(Athallia_scopularis_KC179340:0.20186586782121635,((Flavoplaca_microthallina_KC179368:0.15437489712881738,((Lazarenkoella_zoroasteriorum_KT456215:1.00000050002909E-6,Lazarenkoella_zoroasteriorum_KT456216:1.00000050002909E-6):0.030963489543097963,(Calogaya_zoroasteriorum_KY749092:0.0017761479617996404,(Calogaya_zoroasteriorum_KY749105:0.00795250360792443,(Calogaya_zoroasteriorum_KY749090:0.0018619318434071948,Calogaya_zoroasteriorum_KY749091:0.003778454287269739):0.0034149481870997087):0.004183069426618816):0.010318137483121983):0.11504494622028058):0.03291112269530542,((Orientophila_sp_KC179372:0.07199612146067984,Orientophila_sp_LC490371:0.027968846825026764):0.01717290777988992,(Orientophila_corticola_MN687909:0.021663731561010736,((Orientophila_subscopularis_KC179375:1.00000050002909E-6,Orientophila_subscopularis_KJ133474:0.0037917516513532672):0.01665065973962388,((Orientophila_subscopularis_LC490368:0.0019270289960992173,(Orientophila_subscopularis_KJ133476:1.00000050002909E-6,Orientophila_subscopularis_KJ133475:0.0038271528990130163):0.0038453559113883398):0.013997168132579698,(Orientophila_sp_KC179373:0.027726906686493746,(Orientophila_loekoesii_KC179374:1.00000050002909E-6,(Orientophila_loekoesii_KJ133473:0.001910162045326805,Orientophila_loekoesii_KJ133472:0.007785113206990807):1.00000050002909E-6):0.008800419684006681):0.008591256332786816):0.002722390630473332):0.009740821626473451):0.012211196943694646):0.08190989471432741):0.0012326114399263178):0.18989064160848876); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr121833] END;