#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 5:36 GMT TreeBASE (cc) 1994-2008 Study reference: Spies C.F., Mostert L., Carlucci A., Moyo P., Van jaarsveld W.J., Du plessis I.L., Van dyk M., & Halleen F. 2020. Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa. Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S26669] [ The following blocks are input data for analysis step 26999 ] BEGIN TAXA; TITLE TaxaForAnalysisStep26999; DIMENSIONS NTAX=11; TAXLABELS 'Hysterium angustatum KX611363_MFLU_16_1179' 'Hysterium angustatum MN608547_MFLUCC_11_0004' 'Hysterium doimaeensis MH535872_MFLUCC_16_0329' 'Hysterium pulicare ECSN1227_ITS4' 'Hysterium pulicare EU552137_CMW_20409' 'Hysterium pulicare MH855497_CBS_240.34' 'Hysterium rhizophorae MG844284_PUFD43' Hysterium_sp._CSN1108_ITS5 'Hysterium thailandica MH535873_MFLUCC_16_0338' 'Psiloglonium colihuae KP744466_MFLUCC_11_0178' 'Psiloglonium sasicola KP744467_MFLUCC_10_0565' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M58023] TITLE 'Hysterium - ITS alignment'; LINK TAXA = TaxaForAnalysisStep26999; DIMENSIONS NCHAR=776; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Hysterium angustatum KX611363_MFLU_16_1179' ----------------------------------------------------------------------AACAAGG-------------------------------------------------------------------------------------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATT-AAAGAAAGGATCGAGTTTGCAGTGTCCG---------------------------------------------CCACTG---CAAGCTCTCTCCGAAA---CCCCAACCCTTGATCACTG-TACCTT--TGTTG--CCTCGGCGGGTTCGCCCGCCGGTGGATGCAA-------TCAAACTACTGTTTAACTGTGTAGTCTGAGCGATCATAGCAAT--AGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCACCAATCAAGCCT--------GGCTTGGTATTGGGACCCGTCCACCTATC--GAG-GT--GAGCGCTCCCCAAAAGCATTGGCAGTATGGTGCCGGCTTCGAGCGTAGCAGAAATCTCGCTCCATGGGCCTGGCAC-TGTAGTGGCCGCGAGTTA----TACCCAAGG 'Hysterium angustatum MN608547_MFLUCC_11_0004' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATG--ACTCTGCATGATCCACCCTCCTAAA---CCCCAACCCTTGATTACCA-TACCTT--CGTTG--CCTCGGCGGGTTCGCCCGCCGGTGGATGCAA-------CCAAACCATTGTACAACAGCGAAGTCTGAGCAA-CATAGCAAT--AGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCACCAATCAAGCCT--------GGCTTGGTATTGGGAGCCATCCCGCCTTC--GAGCGT--GGATGCTCCCCAAAACTATCGGCGGTGCGGTGCCGGCTTCGAGCGTAGCAGAAATCTCGCTCCATGGGCCCGGTTC-CGTAGTGGCCGTGAAAGA----CCACCAAGG 'Hysterium doimaeensis MH535872_MFLUCC_16_0329' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTGCGGAAGGATCATT-----ACAGATCGAGGAATGCCCGCTGCGGG------------------------------------GGCCAAACCCCTA---TGCGTGGCGCCTTGGA---CTCCAACCCTTGATGGCCGAGACCTT--TGATAGCCTCCGGCGGGTCCGCCCGCCGGGCGGCGCATCGCGAAAACTATTTGTGGTTGAACGGCGTAGTCTGAGCTTTGTGAGCAAACGAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCAACCCTCAAGCCT--------GGCTTGGTGTTGGGTGCCGCCCCGCGCAC--AGC----GGGGCGCTCCCTGAGACTATCGGCGGTGCGGTACCGGCCCTGAGCGTAGCAGA--TCTCGCTGCGGGACCGGGTGGC-CGTGGCGGCCGCGAACGCGAAACCTCTCGG- 'Hysterium pulicare ECSN1227_ITS4' GTTGAAGAAGC------------GAATGGTTAGCGACGGGTCCATCTGATTGCACCAGCTCACTG-CCACAACAGGCAGTACAT------ACTGT-AAAGAAGCGGTTGGTGTCTTAATTCCCATGCGTGTGGAAGTCAAGATGTGAATGCAGACTTGGCGTGCTCAAATGTACGCCCTGTCT---------TCCCAGCGCCACCTTCTTTCAACGTCCCGCCTACTGGCGGGGAGCGGTCTGCCGCAGGCAGT-------------------------------------------GCTCTGC-CCACCCACCCTCCTAAA---CCCCAACCCTTGATTACCG-TACCTT--CGTTG--CCTCGGCGGGCCAGCCCGCCGGTGGACGCAA-------CCAAACTACTGTTCAACAGCATGGTCTGAGCAATTATAGCAAT--AGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGC-TCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Hysterium pulicare EU552137_CMW_20409' GTTGAAGAAGCG-----------GAATGGTTAGCGACGGGTCCATCTGATTGCACCAGCTCACTGCCCACAACAGGCAGTACAT------ACTGTAAAAGAAGCGGTTGGTGTCTTAATTCCCATGCGTGTGGAAGTCAAGATGTGAATGCAGACTTGGCGTGCTCAAATGTACGCCCTGTCT---------TCCCAGCGCCACCTTCTTTCAACGTCCCGCCTACTGGCGGGGAGCGGTCTGCCGCAGGCAGT-------------------------------------------GCTCTGC-CCACCCACCCTCCTAAA---CCCCAACCCTTGATTACCG-TACCTT--CGTTG--CCTCGGCGGGCCAGCCCGCCGGTGGACGCAA-------CCAAACTACTGTTCAACAGCATGGTCTGAGCAATTATAGCAAT--AGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCACCAATCAAGCCT--------GGCTTGGTATTGGGAGCCGTTCCGCCCTC--GTGTGTGAGGACGCTCCCCAAAACTATCGGCGGTACGGTGCCGGCTTCGAGCGTAGCAGAAACCTCGCTCCATGGGCCCGGTGT-CGTGGCAGCCGCGAAATA----CCCCCAAG- 'Hysterium pulicare MH855497_CBS_240.34' ------------------------------------------------------------------------------------------ATTAAAAGATAGGATCAGTGGGTTTAGGGTCTACTACTGGGACTGCCACTTCCGCCATTGCGAGGAAGCTGGGAAATTATGCGGGAAATGTCCGTTGATA--GTCCCGTATCGCAATGAGCAGTCCACCTCGCCAATGGAAGGTTGTGGCGTCCTACCAGTA---------------------------------------------GCTCTAT-CCTACCACGTTCCGAAA---CCCCAACCCTTGATTATCG-TACCTT--TGTTG--CCTCGGTGGGTTCGCCCACCGGTGGACGCAA-------CCAAACCACTGTCTAACGGCGTCGTCTGAGCGATAAAAGCAAT--ATTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCACCAATCAAGCCT--------GGCTTGGTGTTGGGAGTCGTCCTGCCCTC--GAGCGC--GGATGCTCCCCAAAAATATCGGCAGTGCGGTGCCGGCTTTGAGCGTAGCAGAAACCTCGCTCTGTGGGCCCGGTGC-CGTGGCGGCCGCGAAGAC----CACCCAAGG 'Hysterium rhizophorae MG844284_PUFD43' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------CCACTG---CAAGCTCTCTCCGAAA---CCCCAACCCTTGATCACTG-TACCTT--TGTTG--CCTCGGCGGGTTCGCCCGCCGGTGGATGCAA-------TCAAACTACTGTTTAACTGTGTAGTCTGAGCGATCATAGCAAT--AGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCACCAATCAAGCCT--------GGCTTGGTATTGGGACCCGTCCACCTATC--GAG-GT--GAGCGCTCCCCAAAAGCATTGGCAGTATGGTGCCGGCTTCGAGCGTAGCAGAAATCTCGCTCCATGGGCCTGGCAC-TGTAGTGGCCACGAGTTA----TACCCAAGG Hysterium_sp._CSN1108_ITS5 ACAGACAGTGGGATGTTATGTACGAGCTATCCGCAGCGAAGCCCCTAAACCGTATT------TCAAACGCGGCATGGGGAACGTCCACAGACTAAGTGGAAGTGGGTAGGGGTTCATTCGTCCCTGCTTAAGATATAGTCGGTCCCCCTGAGAAGTCTTGGGGTTGAAGTACACTGAAGCTTTATTCAAAC-GTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAGAAAAGGATCGGGTTTACGGTGTCCG---------------------------------------------CCACCG---CAAACCCCCTCCGAAA---CCCCTACCCTTGATTATCG-TACCCT---GTTG--CCTCGGTGGGTTCGCCCACCGGTGGACGCAA-------TTAAACCACTTTTTAACTGCGTGGTCTGAGCGATTATAGCAAT--AGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCACCAATCAAGCCT--------GGCTTGGTATTGGGATCCGCCCGCCTTTT--GGAC----GGGCGTTCCCTAAAAGCATCGGCGGTACGGTGCCGGCTTTGAGCGTAGCAGAAACCT--------------------------------------------------- 'Hysterium thailandica MH535873_MFLUCC_16_0338' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGAAGGATCATT----ACCAGATATTGGACTGCGGGGTG--------------------------------------------------------ATGCCCAGGTCCAAGAACCCCCCAACCCTTGATAAAGC-AACCTTGAGGCTG--TCTCGGTGGGCGTGCCCGCCGGAGTACATCC--AGAAAAACCACTGCAGTTAAACATGGCAGTCTGAGCGAACAGCAAAAT-AAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATT-TCAAACCTCAAGCTC--------TGCTTGGTATTGGGTGCCGTCCTGCTTCC--TGT----GGGGCGCTCCCTAAAATCATCGGCGGCGCGGCACCGGCTCCGAGCGTAGTAGACCTCGCG---AAGGGACCGGGCGC-TGCGGCGGCCGCTAAAAGAACCCCCCAAAGT 'Psiloglonium colihuae KP744466_MFLUCC_11_0178' ------------------------------------------------------------------TCGTAACAAGG-------------------------------------------------------------------------------------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATT--ACCAGTGGATCGGGGCTGCACGGCCCGGGCGTGTTTACCCCCGCTCCCTCTGAGCGGGGGCCATGGGCCG--GCCGTGCCAACGCCTCCCTCCGAAA---CCCCAACCCTTGAGAACGT-CACCTC--TGTTG--CCTCGGCGGGTACGCCCGCCGGTGGACGCGA-----ATCCAAACCCTGTCGTAACGGCGTCGTCTGAGCGAACGAGCAATT--GTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATTGTCACCACTCAAGCCT--------GGCTTGGTGTTGGGGGACGCCCCGCCCTCCTGGGCGC--GGGCGCCCCCTAAAACGATCGGCGACACGAGGCCGGCTCCGAGCGCAGCAGAAACCTCGCTCCGTGGGCCCCGCCCTCGCGTCGGCCGCAGAAAC----CCCCCCAAA 'Psiloglonium sasicola KP744467_MFLUCC_10_0565' T-----------------------------------------------------------------CCGCGGGAGGGGGAA--------------------------------------------------------------GTCAACTGCAAGTCTGAGAGTACCGGGACATGGAGTCTCGGTCCGCGCCCGCCCGAGCGCGGGCCGTCAGAAAGTAGAACGAGTGAAAAGATGAAGGCAGCGAGCAGCAGTTG---------ACCCCCCCTCTTGGGGCGGGAGTACGGCTG--GCCATGC-CAACCCCTCCCTCCAAA---CCTCAACCCTTGAATACAA-CACCTC--CGTTG--CCTCGGCGGGTACGCCCGTCGGTGGACGCAA------TCCAAACTCCGTCGTAACCGCGTCGTCTGAGCGGAGTAAGCAAC--CGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATCCCGAAGGGCATGCCTGTTCGAGCGTCATTGTCAACGCTCACGCCCCGTGCCGAGGCGTGGTGTTGGGGGACGTCCCGCCCCC--GGGCGC--GGACCCCCCCGGAAGCCATCGGCGGCACGACGCTGGCCCCGAGCGCAGCAGAAATCTCGCTCCGCGGGCCGGGCGC-CGCGTCGGCCCCGAAA--------------- ; END; [ The following blocks are output data for analysis step 26999 ] BEGIN TREES; TITLE 'Hysterium - ITS phylogeny'; LINK TAXA = TaxaForAnalysisStep26999; TREE Imported_tree_1 = [&R] (('Psiloglonium sasicola KP744467_MFLUCC_10_0565':0.3123659,'Psiloglonium colihuae KP744466_MFLUCC_11_0178':0.1264104):0.04937405,(('Hysterium doimaeensis MH535872_MFLUCC_16_0329':0.29462103,'Hysterium thailandica MH535873_MFLUCC_16_0338':0.28808443):0.11565501,((Hysterium_sp._CSN1108_ITS5:0.11993621,('Hysterium angustatum KX611363_MFLU_16_1179':1.0E-8,'Hysterium rhizophorae MG844284_PUFD43':0.00318079):0.04416436):0.08659737,('Hysterium pulicare MH855497_CBS_240.34':0.22024564,('Hysterium angustatum MN608547_MFLUCC_11_0004':0.04562355,('Hysterium pulicare EU552137_CMW_20409':1.0E-8,'Hysterium pulicare ECSN1227_ITS4':1.0E-8):0.15625181):0.0800251):0.11899843):0.04050659):0.04937405); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr128775] END;