#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 7:32 GMT TreeBASE (cc) 1994-2008 Study reference: Spies C.F., Mostert L., Carlucci A., Moyo P., Van jaarsveld W.J., Du plessis I.L., Van dyk M., & Halleen F. 2020. Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa. Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S26669] [ The following blocks are input data for analysis step 27001 ] BEGIN TAXA; TITLE TaxaForAnalysisStep27001; DIMENSIONS NTAX=26; TAXLABELS 'Capnodium salicinum MH855469_CBS_131.34' 'Cladosporium cladosporioides MH857281_CBS_170.54' 'Delphinella strobiligena MH860318_CBS_735.71' 'Diplodia tsugae MH870106_CBS_418.64' 'Elsinoe arachidis NR_148125_CBS_511.50' 'Elsinoe banksiigena NR_159837_CPC_32402' 'Elsinoe barleriicola NR_148128_CBS_471.62' 'Elsinoe eucalyptigena NR_155099_CPC_29529' 'Elsinoe eucalyptorum NR_155080_CBS_120084' 'Elsinoe flacourtiae NR_148141_CBS_474.62' 'Elsinoe hederae NR_148146_CBS_517.50' 'Elsinoe jasminicola NR_148149_CBS_212.63' 'Elsinoe oleae NR_148159_CBS_227.59' 'Elsinoe perseae NR_148160_CBS_406.34' 'Elsinoe pitangae NR_148162_CBS_227.50' 'Elsinoe proteae NR_132796_STE_U_1349' 'Elsinoe quercus ilicis_NR_148164_CBS_232.61' 'Elsinoe rosarum NR_148167_CBS_212.33' 'Lembosiniella eucalyptorum NR_165601_CBS_144603' Lembosiniella_sp._CSN1210_ITS4 Lembosiniella_sp._CSN1225_ITS5_CS31 'Myriangium citri KU720543_MAsS1' 'Myriangium duriaei MH855793_CBS_260.36' 'Myriangium haraeanum MH855532_CBS_300.34' 'Patellaria quercus NR_152540_CPC_27232' 'Stylodothis puccinioides MH857753_CBS_193.58' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M58021] TITLE 'Lembosiniella - ITS alignment'; LINK TAXA = TaxaForAnalysisStep27001; DIMENSIONS NCHAR=617; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Capnodium salicinum MH855469_CBS_131.34' ATGAGTGATGGG--------CTTCGGCCCGA--CCT-CCAACCCTTTGTCTTACCGAC----CATGTTGCCTCGGGGGTGGCCCT-----------------------------------------------------------------------GCCCTGCGCTTGGCCCCCCCGGTGGACC---ACTAAACTCTG---C----ATCACCTTTGCGTCTGAGTATT---TATATTAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCTTGGGGCACACCTGTTCGAGCGTCATTACACCACTCAAGCCTA-GCTTGGTATTGGGCGAT--------------------------------GCGGCTCCCGCACGCCTCAAATGCTCCGGCTGATC-CGCGTAATCTCTCAGCGTTGTGGAAACTCTC----------GCTCATGGGACCTCGCG----GCTCAC--GCCGTTAAACATATCATTT--------AA------------- 'Cladosporium cladosporioides MH857281_CBS_170.54' -----CAAGTGA--CCCCGGCTACGGCCGGGATGTTCATAACCCTTTGTTGTC-CGAC----TCTGTTGCCTCCGGGGCGACCCT-----------------------------------------------------------------------GCCTTCGGGCGGGGGCTCCGGGTGGACA--CTTCAAACTCTT----GCG--TAACTTTGCAGTCTGAGTAAAC--TTAATTAATAAATTAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTC-GCTTGGTATTGGGCAAC--------------GC-----------------GGTCCGCCGCGTGCCTCAAATCGTCCGGCTGGGT-CTTCTGTCCCCTAAGCGTTGTGGAAACTATT---------CGCTAAAGGGTGTTCGGGA---GGCTAC--GCCGTAAAACAACCC--------------CATTTCTAA---- 'Delphinella strobiligena MH860318_CBS_735.71' AAGAGATAGGGT--CTTC----ATGGCCCGA--CCT-CCAACCCTCTGTTGTTAAAACTAC-CTTGTTGCTTTGGCGGGACCGTC---TCGGTCCCC-----------------------GAGCGCACTAA-----------CCCT----------CGGGTTGGTGAGTGCCCGCCAGAGTCCA---ACCAAACTCTT---GTAT--CAAACCAGTCGTCTGAGTATAAA-ATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCATC-GCTTGGTATTGGGAACG--------------GTCCGT-----------CGAAAGGCGGGCCTTCCTCGAAGACCTCGGCGGGGT-TCAACCAACTTCGGGCGTAGTAGAGTTAAAT-------CGAACGTCTTATAAGCTTGGTCGGATCTCATTGCCGTTAAACCTTTA--------------AATTTTCTA---- 'Diplodia tsugae MH870106_CBS_418.64' CCGAGTT-------CTCGGGCTTCGGCCCGAA-TCT-CCCACCCTTTGTGAACACACC----TCTGTTGCTTTGGCGGCTCTTGC---CGCGC------------------------GGGGGGCCCCCCTG--------AAGGGCC----------GCCCCGCGCGCGCTTCCGCCAGAGGACC---TTCAAACTCCA--GTCAG--TAAACGTCGACGTCTGATAAA---CAAGTCAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCT-GCTTGGTATTGGGCGCC--------------GTCCT--------------CTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACACC--------TCGCTTTGGAGCGGCTGGCG---TCGCCC--GCCGGACGAACCTTC----------TGAACTTTTCTCA---A 'Elsinoe arachidis NR_148125_CBS_511.50' ACGAGGTAGGGTTCTCCCTCGGGAAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TACGTTGCTTCGGCGGGACCCCC---CCTTCTGCCCTTC--------ACCGGGGAGGGGGAGGGACCGG---------GCCTTCA--------CTGGCCCGGGCAGCGCCCGCCGGGGGACC--AAACCAACTCTT--TTGTT--AAATAATGCAGTCGGAGTACAATGTACAAAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGAT--CTGGCCGGCCC-CC-----------------CGTGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC-T-------TCAACGTCGAGAGCACCGGTG--TACCTCC--GCCGTGAA---------------------------------- 'Elsinoe banksiigena NR_159837_CPC_32402' AAGAGCAAGGGT--CCCCC---GGGGCCCGA--CCT-CCCACCCTTTGTCGTCGCGAA----TTCGTTGCCTCGGCGCGGCCCGG---CCTCGCTC-------------------------GGCCGACCGG--------GCTACCC----------TTGCCCGGGCAGCGCCCGCCGGAGGACC--AACCCAACTCTG---TCAA--GAACTGTGCGGTCGGAGCGGATT-TTTCAAAATCAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCCGGCTTGGAATTGGGCGCC--AGGCCCGCGCT-GC-----------------AGCCGCGGGCCCGCCTCAAACGCATCGGCGAGG---AGACCGACCCCCGGCGTGTTAGAATCTTCC-------AAAACGTCGAGAGCACCGGTC--CACTTCA--GCCGCGAACCTCTTC---------------TCCGGAAACAAA 'Elsinoe barleriicola NR_148128_CBS_471.62' ACGAGGTAGGGTTCTCCTCCGGGAAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TCTGTTGCTTCGGCGGGACCCCC---CTCC--------------------------AGGGGGGGACCGG-------GAGCCCCTCTCGCGGGGGGGCCCCGGGCAGCGCCCGCCGGGGGACC--GAACCAACTCTG--TCATT--GAACATTGCAGTCGGAGTACAACGTACACAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGAT--CAGGCCGGTCC-CC-----------------CGGGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCGAGAGCACCGGTG----CCCGA--GCCGCGAA---------------------------------- 'Elsinoe eucalyptigena NR_155099_CPC_29529' AAGAGTATGGGT--CATCC---GTGGCCCGA--ACT-CCCACCCCTTGACGTCGCGAAC---AACGTTGCTTCGGCGCGGCCCGC---CCCCTCCAC---------------------GGGGGGCGACCGG-----------GTCC----------AGGCCCGGGCAGCGCCCGCCGGAGGACC---CCAAAACTCTG----TTT--TAACCATACGGTCGGAGCAAT---TTTGAAATCAAACAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCCCG-GCTTGGTAATGGGCGTC--CGGCCCGCGCT--------------------TGCCGCGGGCCCGCCCGAAACCCATCGGCGAGG---AGACCGACCCCCGGCGTGTTAGAATTCTTTCA-----CGTACGTCGGGCGCGAAGGCC--CCCCTCTC-GCCGCTTAAACCCAC--------GGAGCCCCGCTCCATCACA 'Elsinoe eucalyptorum NR_155080_CBS_120084' AAGAGTAAGGGT--TCCCGAAAGGGGCCCGA--CCTCCCCATCCTTTGCTGTCGCGAA----TATGTTGCTTCGGCGGGCCCCCC---TCTC----------------------------GGGGGGGCCGG---------GCCTCA----------CCGCCCGGACAGCGCCCGCCGGGGGACC--GAACCAACTCTG---TTTA--AAACAATGCCGTCCGAGTACTTT-TGTACAATTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTACTCCGAGGGGCATGCCTGTTCGAGCGTCAGTAGAAGGATCAAGCCCA-GCTTGGTATTAGGCGTC--TGGCCGGCCCG-CCCTTC-------------GGCGGCCGGCCCGCCCGAAATTCATCGGCGAGG----CATCGACCCCCGGCGTGTTAGATTTTC---------GAAACGTCGGGAGCACCGGTC--CACCTCC--GCCGCGAAATCCATT--------------TTACAATGTC--A 'Elsinoe flacourtiae NR_148141_CBS_474.62' ACGAGGTAGGGC--CTCCCCCGGGAGCCCGA--ACTCCCCACCCTCTGCTGTCGCGAAT---CACGTTGCTTCGGCGGGACTTCC---CCCCCTCCCTCTC--------TCGGGGGGGGCGGGGGTGCCGG---------GCCACC----------GCGCCCGGACAGCGCCCGCCGGGGGACC--GAACCAACTCTTGTCTTGTAAAACCTTTGCAGTCGGAGTACTAC-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTGGGCGCGACAGGCCGGCCCC-CC-----------------CGCGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATCTC---------GAAACGCCAGGAGCACCGGTG--ACCCTCC--GCCGTCAA---------------------------------- 'Elsinoe hederae NR_148146_CBS_517.50' ACGAGGTAGGGC--CTCCTTCGGGAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----CAAGTTGCTTCGGCGGGACCCCC---CCTCT----------------------AAACCGGGGGGACCGG---------GCCTCC----------GCGCCCGGGCAGCGCCCGCCGGGGGACA--CAACCAACTCTT---TTGTTAAAACAATGCAGTCGGAGTACAAT-CGTACAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTC--TAGGCCGGACC-CC-----------------CGCGTCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTG--ACCCTCC--GCCGTCAA---------------------------------- 'Elsinoe jasminicola NR_148149_CBS_212.63' ACGAGGTAGGGC--CTCCCCCGGGAGCCCGA--ACTCCCCACCCTTTGCCGTCGCGAA----CACGTTGCTTCGGCGGGCCACCT---CTCT----------------------------------------------------------------CCGAGGGGACAGCGCCCGCCGGGGGACC--GGAACAACCCTG---CATT--CAACCGTGAGGTCGGAGTACAT--CGTACAATCAAAGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCTATCAAGCCCC-GCTTGGCAGTGGGCGTG--GTGGCCGCCCT-CCATC------------GGAGGGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTGT-CACCCTC--GCCGCCCA---------------------------------- 'Elsinoe oleae NR_148159_CBS_227.59' ACGAGGAAGGGT--TCCCGAAAGGGGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TACGTTGCTTCGGCGGGCCCGCC---CCTCCCCCCCCAA--------GGGGGGGTACAGGGCTGGCCGG-------TCCCCTCG----------CGGACCGGACAGCGCCCGCCGGAGGACC--AAACCAACTCTG---TTTT--TAACCATACTGTCGGAGTACTTT-TGTACAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTC--AGGCCGGATCC-ACCCCCCGTAAAAAAGGGGGGGAGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTGTTAACCTCT--GCCGTCAA---------------------------------- 'Elsinoe perseae NR_148160_CBS_406.34' ACGAGGTAGGGC--CTCCTCCGGGAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAAT---CACGTTGCTTCGGCGGGACCCCC---CCCCTCCCCTTCTTCGAGAGAAGCGGGGGGCGGGGGGGGCCGG---------GCCACC----------GCGCCCGGACAGCGCCCGCCGGGGGACC--GAACCAACTCTTGCACATC--AAACATTGTAGTCGGAGTACAAC-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTGGGCGTG--TGGCCGGCCCC-CC-----------------CGTGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATCTC---------GAAACGTCAGGAGCACCGGTG--ACCCCCTCCGCCG-------------------------------------- 'Elsinoe pitangae NR_148162_CBS_227.50' ACGAGGTAGGGC--CTCCTCCGGGAGCCCGA--ACCCCCCACCCTTTGCTGTCGCGAAC---CACGTTGCTTCGGCGGGACCCCC---GCCCCCCCT-CCG--------AGAGAGGGGCGGGAGGGGCCGG---------GCCACC----------GCGCCCGGGCAGCGCCCGCCGGGGGACC--GAACCAACTCTTGTCTCTTGGAACCTTTACAGTCAGAGTACAAC-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTGGGTGCGACAGGCCGGCCCC-CC-----------------CGTGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTG--ACCCTCG--GCCGTCAA---------------------------------- 'Elsinoe proteae NR_132796_STE_U_1349' ACGAGGTAGGGC--CTCCTTCGGGAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TCCGTTGCTTCGGCGGGACCCCT---CCCCTCTCC-------------------GGGGGGAGGGACCGG---------GCCTCCA--------AGGGCCCGGGCAGCGCCCGCCGGGGGACC--GAACCAACTCTT--TTTGTCAAAACAATGCAGTCGGAGTACAATGTACAAAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTA-CCAGGCCGGCCCGCA-----------------CGCGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTCTT-------TTGACGTCGAGAGCACCGGTG--ACCCTCC--GCCGTGAAACCTTTT--------------AAATTTCTTCTAA 'Elsinoe quercus ilicis_NR_148164_CBS_232.61' CCGAGGAAGGGT--TCCCGCGAGGGGCCCGA--ACTCCCCACCCTTTGCTGTCGCGAA?---CGCGTTGCTTCGGCGGGCCCTCC---CCCGGACATC--------------------CGGGGGGGGCCGGG-----GCCACCACA----------GGCCCCGGACAGCGCCCGCCGGGGGACCCGAAACCAACCCTT---TCTG--TAACCGTGACGTCGGAGTACTAT-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCGTA-GCTTGGTGTTGGGGCGA-CAGGCCGGGGCC-GCACC------------GCGGCTCCCGGCCCGCCCGAAACCCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGCCGCGAGCACCGGTT---GCGTCT--GCCGCGAA---------------------------------- 'Elsinoe rosarum NR_148167_CBS_212.33' ACGAGGAAGGGT--TTCCGAAAGGAGCCCGA--TCTCCCCACCCTTTGCTGTTGCGAA----TCTGTTGCTTCGGCGGGCCCGTCTTGCCTCCCCCGTCCG--------CGGGGGGTGGCCGGCCGGCCGG---------GCTTCA----------CGGCCCGGACAGCGCCCGCCGGAGGACC--AAATCAACTCTG---TTTT--TAACCATACTGTCGGAGTACTTT-TGTACAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTC--TGGCCGGACCC-TCCCCCC--------TGGGGAGGACCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTGTTAACCTCC--GCCGTGAA---------------------------------- 'Lembosiniella eucalyptorum NR_165601_CBS_144603' CAGAGTTAGGGT--CTTC----CAGGCCCGA--TCT-CCCACCCTTTGTTGTCGAACAAACACCTGTTGCTTTGGCGGACCCGCC---GCGTCTCC---------------------GGACCGGCTGTCGG--------GTCTTTT----------CGATCGGGCAAGCGTCCGCCAGAGACCA---ACTAAACTCTT----CGT--TAAACATTC-GTCTGAGTAAA---TGATTAAATCAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCACA-GCTTGGCATTAGGTCTC--TTCGTCCGCGG-TC-----------------AAACGCGGGCGGGCCTCAAAACCTTCGGCAGAGT-CGGACCGGCTTTGGGCGTAGCAGAAATTGTC-------AAAACGTCCTCATGGCCACAA--GTCTTTA--GCCGCAAAACCTCTCCCCTCGCGGGAGAACTTTTTCAA---- Lembosiniella_sp._CSN1210_ITS4 ---------------------------------------------------------------------------------------------------------------------GGTCGGGCTGCCGG---------GTCCTG----------CGACCGGGTAAGCGCCCGCCGGAGACCA---ATTAAAATCTG--ACATT--TGAACATTCTGTCTGAGTGATT--TATACAAATCAATTAAAACTTTCAACAACGGATCTCTTGGTTCT{GT}GCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATT{CT}C{GT}GGGGGCATGCCTGTTCGAGCGTCATTACATCAATCAAGCACA-GCTTGGCATTAGGCCTC--TG{CG}GCCCGCGG-TC-----------------AAACGCGGGCGGGCCTCAAAATCTTCGGCGAAGTCACATCCGGCTTTCAGCGTAGCAGAATCTGTT-------AAA{AC}CGTCCGCGTGGCCAGGGGAGTCTTCC--GCCGCCAGAATCTAT--------------------------- Lembosiniella_sp._CSN1225_ITS5_CS31 ---------------------------------CCT-CTCAC------------------------------------------------------------------------GGGGGCCGGGCTGCCGG---------GTCCT-----------CGATCGGGTAAGCGCCCGCCGGAGAATC---ATTAAAATCTG--ACATT--TGAACATTCTGTCTGAGTGATT--TATACAAATCAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCACA-GCTTGGCATTAGGCCTC-TTGCGCCCGCGG-TC-----------------AAACGCGGGCGGGCCTCAAAACCTTCGGCGAAGTCATATCCGGCTTTGGGCGTAGCAGAATCTGTT-------AAAACGTCCGCGTGGCCAGGGGAGTCTTCC--GCCGCCAGAATCTAT----------TTTATTTTCTCAA---- 'Myriangium citri KU720543_MAsS1' ---------GGT--ACTTT---TGTGCCCGA--ACT-CCCACCCTTTGTTGTCGCGAA----TTTGTTGCCTCGGCGGGTTGCCT---CTT---------------------------CGGGGGCGACGGG-----------CTCC------------------GGTCCACCCGCCGCAGGACA--TTTATAACCCTG----CTT--TAATTGTAAAGTCTGAGTAAATT----CTTAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCTAC-GCTTGGTCTTGGGGGTT--TGGCTTTTGTT-TT-----------------AAACAAAGGCCCCCCTGAAATGCATCGGCGAGG---AAACCGACCCCCGGCGTGTTAGATTTCT----------GAACGTCAGGAGCACCGGTA---GACTCT--GCCGTACAATCTTTT--------------TTATTCAAA---- 'Myriangium duriaei MH855793_CBS_260.36' AAGAGTTGGGGT--CCTCC---GGGGCCCGA--TCT-CCCACCCTTTGTTGTCGCGAA----TTTGTTGCCTCGGCGGGTTTGTC---------------------------------TTCGGACGATGGG-----------CTCC------------------GGCCCGCCCGCCGCAGGACC--ATTCAAACTCTG----CTT--TAACAATGCAGTCTGAGAAGAT--TTTAATAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCAC-GCTTGGTATTGGCCGCG----GCCTTTCGT--------------------CACGGAAGGCCCGCCCGAAATGCATCGGCGAGG---AAACCGACCCCCGGCGTGTTAGATTTCT----------GAACGTCAGGAGCACCGGTG---CCCTCA--GCCGTACAATCTTTT--------------TTTCTAA------ 'Myriangium haraeanum MH855532_CBS_300.34' AAGAGTTAGGGT--CCTTC---GGGGCCCAA--TCT-CCCACCC{GT}TTGT{GT}GTCGCGAA----T{CG}AGTTGC{CG}TCGGCGGGCCGTCT---TCTT--------------------------CGGAGACGATGGG-----------CTCT------------------GGCCCACCCGCCGCAGGACC--ATTCAAACTCTG----CTT--TAACAATGCAGTCTGAGAAGA---TTTAATAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCAC-GCTTGGTATTGGGTGTG--TGGCCTTTTTT--------------------TCTAAAAGGCCCGCCCGAAATGCATCGGCGAGG---AGACCGACCCCCGGCGTGTTAGATTTCT----------GAACGTCAGGAGCACCGGTA---ATCTCT--GCCGTACAATCTTTT--------------TTTCTAA------ 'Patellaria quercus NR_152540_CPC_27232' ATAGAG----------------TATGCACGT--CCGTGCCAGGCCCACGTGGCCCG-------GCACTGGTTCGGTGAAACTCCA---CCCTCTGC----------------------GAAGAGATCTTATATACCTTCTGTTCCC----------TCGGTGGATTCGTATCCGCCGAGGGAGA---TTTAAACCCTT---GCTG--AGTATGTGTCGTCAGAGTAA----TTATCAAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAAACCTCAAGCATC-GCTTGGTGTTGGGTGTT--------------GCCC---------------TCAGCGGGGCACACCTCAAAGCCCTCGGCGGCC--CCGTCCCGCTTCAAGCGTCGTGAACGTCTAAAACGCGTCTCGCTTTGGAAGTCCGGGCC--GGCGCTT--GCCGTGAAAGCCATA--------------TCATC-------- 'Stylodothis puccinioides MH857753_CBS_193.58' GGGAAACCGGTG--TTCC----TCGA--CTA--CTT-CCAACCCTCTGTTGTTATAACTAC-CTCGTTGCTTTGGCGGGACCGTT---TGGTCCTCC-----------------------GAGCGCACCAG-----------TCTT----------CGGACAGGTGAGCGCCCGCCAGAGTCTA---ACCAAACTCTT---GTTT--TTAACCAGTCGTCTGAGTATAAA-ATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACT-GCTTGGTATTGGGCATC--------------GTCCGT-----------CGAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGT-TTCTCCAACTTCGGGCGTAGTAGAGTTAAAT-------CGAACGTCTTATAAGCTTGGTGGGACTCCATTGCCGTTAAACCTTTT--------------ATTTTCTA----- ; END; [ The following blocks are output data for analysis step 27001 ] BEGIN TREES; TITLE 'Lembosiniella - ITS phylogeny'; LINK TAXA = TaxaForAnalysisStep27001; TREE Imported_tree_1 = [&R] ((('Diplodia tsugae MH870106_CBS_418.64':0.47487135,('Cladosporium cladosporioides MH857281_CBS_170.54':0.28648998,'Capnodium salicinum MH855469_CBS_131.34':0.26124773)100:0.3537093)15:1.0E-8,(('Elsinoe banksiigena NR_159837_CPC_32402':0.15896895,(('Elsinoe eucalyptigena NR_155099_CPC_29529':0.19551752,('Elsinoe eucalyptorum NR_155080_CBS_120084':0.09301635,(('Elsinoe quercus ilicis_NR_148164_CBS_232.61':0.14434768,('Elsinoe jasminicola NR_148149_CBS_212.63':0.13033828,(('Elsinoe perseae NR_148160_CBS_406.34':0.02335579,('Elsinoe hederae NR_148146_CBS_517.50':0.03278037,('Elsinoe proteae NR_132796_STE_U_1349':0.01633156,('Elsinoe arachidis NR_148125_CBS_511.50':0.03549171,'Elsinoe barleriicola NR_148128_CBS_471.62':0.0762175)67:0.03617806)90:0.04485534)66:0.04610904)25:0.01543477,('Elsinoe pitangae NR_148162_CBS_227.50':0.04030064,'Elsinoe flacourtiae NR_148141_CBS_474.62':0.04187571)69:0.00733946)25:0.01647805)73:0.06000116)50:0.03576141,('Elsinoe oleae NR_148159_CBS_227.59':0.03145563,'Elsinoe rosarum NR_148167_CBS_212.33':0.04476595)83:0.03364769)27:0.01622885)88:0.09243244)45:0.02492917,('Myriangium duriaei MH855793_CBS_260.36':0.04490049,('Myriangium haraeanum MH855532_CBS_300.34':0.03047098,'Myriangium citri KU720543_MAsS1':0.14738414)66:0.02390171)100:0.15010361)26:0.01172255)94:0.23720983,(('Delphinella strobiligena MH860318_CBS_735.71':0.06459888,'Stylodothis puccinioides MH857753_CBS_193.58':0.08040489)100:0.26169183,('Lembosiniella eucalyptorum NR_165601_CBS_144603':0.09366168,(Lembosiniella_sp._CSN1210_ITS4:0.01791761,Lembosiniella_sp._CSN1225_ITS5_CS31:0.01427875):0.13341746)97:0.16945557)95:0.08759554)57:0.13152235)65:0.467862435,'Patellaria quercus NR_152540_CPC_27232':0.467862435); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr128773] END;