#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 11:42 GMT TreeBASE (cc) 1994-2008 Study reference: Spies C.F., Mostert L., Carlucci A., Moyo P., Van jaarsveld W.J., Du plessis I.L., Van dyk M., & Halleen F. 2020. Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa. Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S26669] [ The following blocks are input data for analysis step 27030 ] BEGIN TAXA; TITLE TaxaForAnalysisStep27030; DIMENSIONS NTAX=20; TAXLABELS Dendrocorticium_sp._KJ140586_CFMR_DLL2011_065 Dendrocorticium_sp._KJ140606_CFMR_DLL2011_089 Dendrocorticium_sp._KJ140694_CFMR_DLL2011_200 'Lepista sordida MF384327_G1' 'Mycoacia fuscoatra KY948754_OMC1380' 'Punctularia atropurpurascens KP814559_UC2022981' Punctularia_sp._CSN1060_ITS5 Punctularia_sp._CSN1061_ITS5 Punctularia_sp._XL_A10_EF488381_A10 'Punctularia strigosozonata AB374288_KRCF712' 'Punctularia strigosozonata DQ398958_HHB_11897_sp' 'Punctularia strigosozonata KU668972_CFMR_RF7JR' 'Punctularia strigosozonata KY449385_IRET41' 'Punctularia strigosozonata KY449386_IRET42' 'Punctularia strigosozonata KY449387_IRET43' 'Punctularia subhepatica MG755209_T6' 'Punctulariopsis cremeoalbida KR494275_Burdsall_9616' 'Punctulariopsis efibulata KR494276_Burdsall_8824' 'Punctulariopsis subglobispora HM046917_FCUG_2535' 'Vuilleminia comedens MG609033_LE_BIN_3878' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M58068] TITLE 'Punctularia - ITS alignment'; LINK TAXA = TaxaForAnalysisStep27030; DIMENSIONS NCHAR=658; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Dendrocorticium_sp._KJ140586_CFMR_DLL2011_065 ACGAGTTTTTGTGAAGGGTTGTAGCT----------CTC--------GTGTGCACG-CCCCGATCAT-----CCACT-----TACACCTGTGCACTTTTTGCGGGAGGG-------------------------------------AGAA--------ATC-----------------CCGACCGCG--TCTC----ACACACACGC--------------------AAGTAACAGAATGTAAAACAGCGCAT---GGCGCATT-TATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAACATATCAACTCGAGGA------ATTTATTCTCTCGAGCTTGGACTTGGAGGTCTTTGCCGGCGATC-------GTCGGCTCCTCTCAAATGCATTA-GCTGGGCTTTAGCTCAG-GGGATCAATCGGTGTGATAATTA-TCTGCGCCGCTCTG--------------CCCCTGGATCCCGCTTACAGTCGTCCT------TCGGGACAAACAT----TTCATCATC Dendrocorticium_sp._KJ140606_CFMR_DLL2011_089 TCGAGTTTTTGTGAAGGGTTGTAGCT----------CTC--------GTGTGCACG-CCCCGATCAT-----CCACT-----TACACCTGTGCACTTTTTGCGGGAGGG-------------------------------------AGAA--------ATC-----------------CCGACCGCG--TCTC----ACACACACGC--------------------AAGTAACAGAATGTAAAACAGCGCAT---GGCGCATT-TATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAACATATCAACTCGAGGA------ATTTATTCTCTCGAGCTTGGACTTGGAGGTCTTTGCCGGCGATC-------GTCGGCTCCTCTCAAATGCATTA-GCTGGGCTTTAGCTCAG-GGGAACAATCGGTGTGATAATTATTCTGCGCCGCTCTG-------------CCCCCTGGATCCCGCT-------------------------------------------- Dendrocorticium_sp._KJ140694_CFMR_DLL2011_200 TCGAGTTTTTGTGAAGGGTTGTAGCT----------CTC--------GTGTGCACG-CCCCGATCAT-----CCACT-----TACACCTGTGCACTTTTTGCGGGAGGG-------------------------------------AGAA--------ATC-----------------CCGACCGCGTCTCTC----ACACACACGC--------------------AAGTAACAGAATGTAAAACAGCGCAT---GGCGCATT-TATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAACATATCAACTCGAGGA------ATTTATTCTCTCGAGCTTGGACTTGGAGGTCTTTGCCGGCGATC-------GTCGGCTCCTCTCAAATGCATTA-GCTGGGCTTTAGCTCAG-GGGAACAATCGGTGTGATAATTA-TCTGCGCCGCTCTG------------------------------------------------------------------------- 'Lepista sordida MF384327_G1' TCGGG---TTGATTCAGGTTGTAGCTGGCTTTTTGGAGC--------ATGTGCACG-CCTAG----------CGCCATTTTTACCACCTGTGCACCTTTTGTAGATTTGAAACAACTCTCGAGGAAACTCGGTTTGAGGAATGCTGTGTGCAAACATGGCT-----------------TTCCTTGTG--TTTC----AAGTCTATGTTTTTATTATACCCCATAAGAATGTAATAGAATGT-TATTAATGGGCTTTATGCCTTTAAATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTTTCAGCTTTTGCAAGTTG-GATTGGCTTGGATGTGGAGGTT-ATTGCGGGCTTCTCTAGAAATCGGCTCCTCTTAAATGCATTA-ACGGAACCTTTGT---GGACCAGCTTTTGGTGTGATAATTA-TCTACGCCATGGTTGTGAAACAGCTTTAACATGGGGTTCAGCTTCTAACAGTCCA--TTGACTTGGACAAATTT---ATGACATTTT 'Mycoacia fuscoatra KY948754_OMC1380' TCGAA-TTACTCGA-GGGTTGTTGCTGGGGTCCCTAACCGGGATTCAAAGTGCACGCCCTTGTCTAC-----ATTCTCA---AACCCCTGTGCACTTATTGTAGGCTCGG----------------------------------TGGAAAGGCTGACTTCACGGTCGGCCTGAAAGCCTTGCCTATG--CTTT---AACACACGCTT--------------------CAGTCTATGAATGTCATTTTGCG------GATAACGCATTTAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCTTCAACACTTTTGTGAA-----GAAGGCTTGGACTTGGAGGCC-GTGTGGGCTGGCAA---CAGTCGACTCCTCTGAAATGTATTA-GTTGCG----AACCTTACGGATCGCTTCGGTGTGATAATTG-TCTACGCCGTGGTGTTGAAGT-----ATAGCAGTGTTCGAGCTTCTAACAGTCCG------CAAGGACAATTTT----TTGACAATC 'Punctularia atropurpurascens KP814559_UC2022981' TCGAG-TTCTGAAAGGGGCTGTAGCTGGCCTTCCGACGC--------ATGTGCACG-CCCTGCTCAT-----CCACTCTCTCTACACCTGTGCACCTTTTGTGGGCGGG-------------------------------------AGGGCGAAAGCCCTT-----------------TTGCCCGCG--TCTC--ACACACACATACACC-----------------TGGTAGCAGAATGTAC-ACATCGCGTCTTAGAACGCATCATTAATATAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGTGGATTGGACTTGGAGGAT-TTGCCGGACTCATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTTTCATTCG--------CGACCCTGGATCCCGCTTCTAATGGTCCC--TCCTTTGGGACAAGCCTCACATATGACATC Punctularia_sp._CSN1060_ITS5 TCGAG-TTCTGAAAGGGGCTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-CCCTGCTCAT-----CCACTCTCTCTACACCTGTGCACCTTTTGTGGGCGGG-------------------------------------AGGGCGAAAGCCCTT-----------------TTGCCCGCG--TCTC--ACACACACATACACC-----------------TGGTAGCAGAATGTAC-ACATGGCGTCTTAG-ACGCATCATTAATATAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGTGGATTGGACTTGGAGGAT-TTGCCGGACTCATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTTTCATTCG--------CGACCCTGGATCCCGCTTCTAATGGTCCC--TCCTTTGGGACAAGCCTCACATATGACATC Punctularia_sp._CSN1061_ITS5 TCGAG-TTCTGAAAGGGGCTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-CCCTGCTCAT-----CCACTCTCTCTACACCTGTGCACCTTTTGTGGGCGGG-------------------------------------AGGGCGAAAGCCCTT-----------------TTGCCCGCG--TCTC--ACACACACATACACC-----------------TGGTAGCAGAATGTAC-ACAT{CG}GCGTCTTAGAACGCATCATTAATATAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGTGGATTGGACTTGGAGGAT-TTGCCGGACTCATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCGGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTTTCATTCG--------CGACCCTGGATCCCGCTTCTAATGGTCCC--TCCTTTGGGACAAGCCTCACATATGACATC Punctularia_sp._XL_A10_EF488381_A10 TCGAG-TTTTGAAAGGGGCTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-CCCCGCTCAT-----CCACTCTCTCTACACCTGTGCACGTTTTGCGGGCGGG-------------------------------------AGGGCGCAAGCCCTT-----------------TTGCCCGTG--TCTC--ACACACACATACACC-----------------TGGTAACAGAATGTATAACACCGCGTTCAGTCGCGTTATCATAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGAGGATTGGACTTGGAGGCT-TTGCCGGACTCATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTGTCATTCG--------CTACCCTGGATCCCGCTTCTAATGGTCCCCGTCGCTCGGGACAAACCTCATATATGACATC 'Punctularia strigosozonata AB374288_KRCF712' TCGAG-TTT--GAAAGGGCTGTAGCTG--CTTCCGAGGC--------ATGTGCACG-CCCCG-TCAT-----CCACTCTCTCTACACCTGTGCACGTTTTGCGGGCGGG-------------------------------------AGGGCGCAAGCCCTT-----------------TTGCCCGTG--TCTCACACACACACACACACC-----------------TGGTAACAGAATGTATAACACCGCGTTCAGTCGCGTTATCATAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGAGGATTGGACTTGGAGGCT-TTGCCGGACTCATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTGTCATTCG--------CTACCCTGGATCCCGCTTCTAATGGTCCCCGTCGCTCGGGACAAACCTCATATATGACATC 'Punctularia strigosozonata DQ398958_HHB_11897_sp' TCGAG-TTTTGAAAGGGGTTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-CCCCGCTCAT-----CCACTCTCTCTACACCTGTGCACATTTTGCGGGCGGG-------------------------------------AGGGCGTGAGCCCTT-----------------TTGCCCGTG--TCTC--ACACACACATACACC-----------------TGGTAACAGAATGTATAACACCGCGTTTAGGCGCGTTATTATAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGTGGATTGGACTTGGAGGCT-TTGCTGGACTTATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTGTCATTCG--------CTACCCTGGATCCCGCTTC{CT}AATGGTCCCC-CTGCTCGGGACAAACCTCACGTATGACAT- 'Punctularia strigosozonata KU668972_CFMR_RF7JR' TCGAG-TTTTGAAAGGGGTTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-TCCCGCTCAT-----CCACTCTCTCTACACCTGTGCACATTTTGCGGGCGGG-------------------------------------AGGGCGTGAGCCCTT-----------------TTGCCCGTG--TCTC--ACACACACATACACC-----------------TGGTAACAGAATGTATAACACCGCGTTTAGGCGCGTTATTATAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGTGGATTGGACTTGGAGGCT-TTGCTGGACTTATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTGTCATTCG--------CTACCCTGGATCCCGCTTCTAATGGTCCCC-CTGCTCGGGACAAACCTCACGTATGACATC 'Punctularia strigosozonata KY449385_IRET41' TCAGA----------GGAGCGTAGCTG--TCTT-ATTTA--------ATTTGCGCTCCCCTGCTCACGACACTCGGGCGCTCTGCGCCTGTG?ACCTTTTGTGGG-GGG------------------------------------CAGGGCCCCTTTTGCT-----------------TTCCCCGCA--TCTT--ACAAATATACACACC-----------------TGGAAACGGAACGTATCACCGCGCCCCTTAGCGCCATATAATTATACAACTTTCAACAACGGATCTCTTGGCTCTCGAATCAATGAACAACGCACCAAAATGCAAGAAGTATTGTGAATTGCAGAATTCATTGAATCTTTGAATCTTTGATGGCACCTTGGGCTCCTTGATATTCCGAGGAGCATGCCTGTTTGGGTGTCCTGAATATCTCAACCCAGCGG-CGTTTGCGCACCATCGGACGATTGGACTTTGACGCT-TTGCCGGACTCCTC---CTCTCCGCTCCTCTCTAATGTTTTGCTTTTGGCCTTGGCTCGGTGGAGGGGATCAGTGTGATAATTA-TCTGCGCTTTTTCCTTCG--------CAACCCCGGATCCCGGTTCTAATGGTCCCCGTCT-GGGGAAAAACCCTCACATATGACATC 'Punctularia strigosozonata KY449386_IRET42' TCAGA----------GGAGCGGGGGGG--TTTTAATTTT--------ATTAGCGCTCCCCTGCTCACGACACTGGGGCGTTTTGTTTTTGTGTACCTTTTGTGGATGGG------------------------------------CAGGACCCCTTTTGCT-----------------TTGCCCGCA--TCTT--AT-CATATACACACC-----------------TGGAAACGGAACCTATCACCGCGCCCCAAGGCGCCTTACTACTTTACAACTTTCAACAACGGATCTCTTGGCTCTCGAATCGATGAACAACGCGCCAAAATGCAAGAAGTTTTGTGAATTGCAGAATTCATCGAATCTTCGAATCTTTGATGGCACCTTGGGCTCCTTGATATTCCGAGGAGCATGCCTGTTTGAGTGTCCTGAATATCTCAACCCTTGGG-CGTTTGCGCACCATCGGACGAGTGGACTTGGACGCT-TTGCCGGACTCCTC---CCCTCCGCTCCTCTCTAATGTTGTGCTTTTGGCCTTGGCTCCGTGGAAGGGATCGGTGTGATAATTA-TCTGCGCCTTCTCCTTCG--------CAACCCCGGATCCCGGTTCTAATGGTCCCCGTCT-GGGGAAAAACCCTCACATATGACATC 'Punctularia strigosozonata KY449387_IRET43' ----------------GGACGTAGGTG--TTTTAATTTT--------ATTAGCGCT-CCCTGCTCACGAGAGGGGTGCGTTTTGTTTTTGTG?ACCTTTTATAGATGTG------------------------------------CAGGGCGC?TTTTGCT-----------------TTGGCCGCG--TCTT--A?-CATATACACACC-----------------TGGAAGCGGAACGTATCCCCGCGCCCCTTAGCGCCTTATTATAATACAACTTTCAACACCGGATCTCTTGGCTCTCGAATCGATGAACAACGCGCCAAAATGCAAGAGGTATTGTGAATTGCAGAATTCATCGAATCTTCGAATCTTTGAAGGCACCTTGGGCTCCTTGATATTCAGAGGAGCATGCCTGTCTGAGTG?CCTGAATCCCTCAACCCAGCCG-CGTTTGCGCACCATCGGACGATTGGACTTGGACGCT-TTTCCGGACTCCTC---CCCTCCCCTCCTCTTTAATGTTTTACTTTTGGCCTTAGCTCGGTGGAAGCGATCGGTGTTATAATTA-TCTGCGCCTTCTCCTTCC--------CAACCCCCGACCCCTGTTCTAATGCTCCCCTTCA-GGGAAAAAACCCT?ATACAACACCTC 'Punctularia subhepatica MG755209_T6' ----------------GGCTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-CCCTGCTCAT-----CCACTCTCTCTACACCTGTGCACCTTTTGTGGGCGGG-------------------------------------AGGGCGAAAGCCCTT-----------------TTGCCCGCG--TCTC--ACACACACATACACC-----------------TGGTAGCAGAATGTAC-ACATCGCGTCTTAGAACGCATCATTAATATAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGAACATCTCAACCCAGCGA-CGTTTGCGCGTCGTCTGTGGATTGGACTTGGAGGAT-TTGCCGGACTGATC---ACGTCGGCTCCTCTCAAATGCATTA-GCTTGGGCTTAGCTCAGTGGAAGCGATCGGTGTGATAATTA-TCTGCGCCGTTTCATTCG--------CGACCCTGGATCCCGCTTCTAATGGTCCC--TCCTTTGGGACAAGCCTCACATATGACATC 'Punctulariopsis cremeoalbida KR494275_Burdsall_9616' TCGAG-TTTTGAAAGGGGTTGTAGCTGGCCTTCCGAGGC--------ATGTGCACG-CCCTGCTCAT-----CCACTCT---AACACCTGTGCACCTTTTGTGGGCTCA-------------------------------------TGGAGGGCAACCTCC-----------------TGGCCTGCG--TCTC----ACACACACGCTTA-----------------AAGTATAAGAATGTATAACCGCATTGTATGATGCATTAT--TAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGA??AACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAGTTCTCAACTCTAAGAGCATTTGTTTGTTCTCTG-AGCTTGGAATTGGAGGCT--TGCTGGCGATG-------GCCAGCTCCTCTCAAATTTATTA-GCTGGGCTGTGCTCGAGAGAAAACAGTCGGTGTGATAATTA-TCTGCGCCGTCACTGAAG---------TATCTCGGATCCCGCTTCTAATCGTCCC------TCGGGACAATCTA---CTCTGACATC 'Punctulariopsis efibulata KR494276_Burdsall_8824' TCGAG-TTCTGAAAGGGGTTGTAGCTGGCCTTCCGAGGC--------ATGTGCACA-CCCTGCTCAT-----CCACTCT---AACACCTGTGCACCTTTTGTGGGCTTA-------------------------------------TGGAGGGCAACCTCC-----------------TGGCCTGCG--TCTC----ACACACACACTTA-----------------AAGTATCAGAATGTACAACCACATCGTATGATGTATTAT--TAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGAT-{AGT}{AG}GAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAGTTCTCAACTCTAAGAGCATTCGTTTGTTCTCTG-AGCTTGGAATTGGAGGCT--TGCTGGCGATG-------ACCAGCTCCTCTCAAATGTATTA-GCTGGGCTGTGCTCGAGAGAAAACAGTCGGTGTGATAATTA-TCTGCGCCGTCACTGAAG---------TATCTTGGATCCTGCTTCTAATCGTCCC------TTTTGGACATCTA---CTCTGACATC 'Punctulariopsis subglobispora HM046917_FCUG_2535' TCGAG-TTTTGAAAGGAGTTGTAGCTGGCCTTCCGGGGC--------ATGTGCACG-CTCCGCTCAT-----CCACTCT---CACACCTGTGCACCTTTTGTGGGCTTG-------------------------------------CGGAGGGCAACCTCC----------------TTGGCCTGCG--TCTC----ACACACACGCTTA-----------------AAGTATCAGAATGTATAACCACATCGCATGATGTATTATTATAATATAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAGTTCTCAACTCCGAGAGCATTTGTTTGCTCTCTG-GGATTGGAATTGGAGGCT--TGCTGGCGATG-------GTCAGCTCCTCTCAAATGAATTA-GCTGGGCTGTGCTCGAGAGAAAACAGTCGGTGTGATAATTA-TCTGCGCCGTCGCTGAAG---------TATCTCGGATCCCGCTTCTAACCGTCC-------TCTGGACAATACA---CCTTGACATC 'Vuilleminia comedens MG609033_LE_BIN_3878' TCGAG-TTTGAAAGGGGTTTGCAGCTGGCTCTCCGGAGT--------ATGTGCTCG-CCTCGCTCAT-----CCACTC----TACACCTGTGCACTATCTGTGGGCTGGG-----------------------------------------GTTAACGCCT-----------------TGGCCTACG--TCTT-----CACACAAACAAT-----------------ATGTATCAGAATGTAACACCGCGTCT--------AACGCAATAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGCGTCGTGAATCTCTCAACCCACAAATTGTTTGTTCAGTTTGTGCGGCTTGGACTTGGAGGCA-TTGCTGGCGATG-------GTCAGCTCCTCTCAAATGTATTA-GCTGGG-CTTAGCTCGGTGGAA-CGGTTAGTGTGATAATTA-TCTGCGCTGCCTAC-------------TACATCGGATCCCGCTTCTAATCGTCCG------CAAGGACAATTC----ACTTTGAATC ; END; [ The following blocks are output data for analysis step 27030 ] BEGIN TREES; TITLE 'Punctularia - ITS phylogeny'; LINK TAXA = TaxaForAnalysisStep27030; TREE Imported_tree_1 = [&R] ((((('Punctulariopsis efibulata KR494276_Burdsall_8824':0.02877374,'Punctulariopsis cremeoalbida KR494275_Burdsall_9616':0.01170402)57:0.01419957,'Punctulariopsis subglobispora HM046917_FCUG_2535':0.03432617)96:0.07418378,('Lepista sordida MF384327_G1':0.31336409,'Mycoacia fuscoatra KY948754_OMC1380':0.32799903)55:0.11431706)19:0.02746164,'Vuilleminia comedens MG609033_LE_BIN_3878':0.16303653)53:0.023862435,(((Dendrocorticium_sp._KJ140586_CFMR_DLL2011_065:0.00510217,Dendrocorticium_sp._KJ140606_CFMR_DLL2011_089:0.0)50:1.0E-8,Dendrocorticium_sp._KJ140694_CFMR_DLL2011_200:0.0)99:0.12083078,((('Punctularia strigosozonata KY449386_IRET42':0.03802739,'Punctularia strigosozonata KY449387_IRET43':0.09683304)87:0.02923164,'Punctularia strigosozonata KY449385_IRET41':0.02756325)100:0.27720378,(((Punctularia_sp._XL_A10_EF488381_A10:1.0E-8,'Punctularia strigosozonata AB374288_KRCF712':0.0055505)90:0.01166092,('Punctularia strigosozonata KU668972_CFMR_RF7JR':0.00183053,'Punctularia strigosozonata DQ398958_HHB_11897_sp':0.0)95:0.01698459)69:0.01614461,('Punctularia subhepatica MG755209_T6':0.0019099,(('Punctularia atropurpurascens KP814559_UC2022981':0.00184045,Punctularia_sp._CSN1061_ITS5:0.00183861)26:1.0E-8,Punctularia_sp._CSN1060_ITS5:0.00184662)37:1.0E-8):0.043106)96:6.5993E-4)44:0.08003113)87:0.023862435); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr128846] END;