#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 2:01 GMT TreeBASE (cc) 1994-2008 Study reference: Spies C.F., Mostert L., Carlucci A., Moyo P., Van jaarsveld W.J., Du plessis I.L., Van dyk M., & Halleen F. 2020. Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa. Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S26669] [ The following blocks are input data for analysis step 27032 ] BEGIN TAXA; TITLE TaxaForAnalysisStep27032; DIMENSIONS NTAX=25; TAXLABELS 'Auriculariopsis ampla AF141873_FCUG_1803' 'Auriculariopsis ampla MH013190_ALV14009' 'Fistulina antarctica DQ486702_CBS701.85' Porodisculus_pendulus_AY572009 'Schizophyllum commune AF348142_CBS_340.81' 'Schizophyllum commune AF350925_CBS_405.96' 'Schizophyllum commune MH854681_CBS_103.20' 'Schizophyllum commune MH857703_CBS_227.57' 'Schizophyllum commune MH857808_CBS_342.58' 'Schizophyllum commune MH859297_CBS_249.69' 'Schizophyllum commune MH861350_CBS_340.81' 'Schizophyllum commune MH861655_CBS_579.83' 'Schizophyllum commune MH862583_CBS_405.96' 'Schizophyllum commune MH863418_CBS_124811' 'Schizophyllum fasciatum L43385_CBS_267.60' 'Schizophyllum radiatum AY571060_CBS_301.32' 'Schizophyllum radiatum MH855328_CBS_301.32' Schizophyllum_sp._CSN1160_ITS4_CS30 Schizophyllum_sp._PMM2087_ITS1 Schizophyllum_sp._PMM2088_ITS1 'Schizophyllum umbrinum AF249391_FL02.1' 'Schizophyllum umbrinum HQ377288_UFMGCB_1835' 'Schizophyllum umbrinum KR261612_BDNA2316' 'Schizophyllum umbrinum MK578040_CCG019' 'Schizophyllum umbrinum MK578041_CCG020' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M58070] TITLE 'Schizophyllum - ITS alignment'; LINK TAXA = TaxaForAnalysisStep27032; DIMENSIONS NCHAR=662; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Auriculariopsis ampla AF141873_FCUG_1803' ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----CAACCATCAACCCT-CTTTTGATTTCGGTCTA--AGGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAACCTAACAGTGCCAGCTCCTCTCAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCA--------CTACGTCGTTG-------------ACCATCTCGGAGC-TGACCTAGTCAGTTTCAATAGGAGTTTGCTCATAACTGTCTCTAG--CGAGACTAGCGACTTGTGCGC----------TACTTTAAGAC 'Auriculariopsis ampla MH013190_ALV14009' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCTGCGG--TTGACTACGTCTACCTCACA----CTCT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACCGACCCT-AAAAGT---CAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----CAACCATCAACCCT-CTTTTGATTTCGGTCTA--AGGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAACCTAACAGTGCCAGCTCCTCTCAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCA--------CTACGTCGTTG-------------ACCATCTCGGAGC-TGACCTAGTCAGTTTCAATAGGAGTTTGCTCATAACTGTCTCTAG--CGAGACTAGCGACTTGTGCGC----------TACTTAAGA-- 'Fistulina antarctica DQ486702_CBS701.85' AACCACTCATCC-ACCTGTGAACCTTCTGCGTGATTGGGGAGTTCTTCGACGAAGTCGCGAAGGTCGCATCTGTCTCAGCTCTGCGGCGCCGTGGCTG----------AGGAGCCTGACTCTCCTTCA--CGTCTCACACACATTACACA----CCTTTGAAAAACAGTCTCAGAAAGT--CAACGGTCGTAGCGGACCAT-AAACGTG-TCTATACAACT???????????????????????????????????????????????????????????????????????????????GTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCGCTCTCGG--TTTGTCATTCGAACCGA--CGGGTCGTGTTGGATCGTGGGGGTCTCTCATTGCTGGCTGTTCGCG--GCCGGCTCCCCTCAAATGCATTAGCGACCGTCCTCTGCTGGATCGTGCACTCGGTGTGATAGTTCTCATACGTCTACGCCGTCGT-----------TGCCATCCCGGGGC-CA--CATGTGGCCTCAAGGAGGTGATCACAAAAGCTTTGTCGCTC--ACAAATTGTCCCTATATGCGCGCGC-----ATATATATATAT Porodisculus_pendulus_AY572009 ----ACACATCC-ACCTGTGAACCTTCTGCGCGA--------------GACGAAGTCGAGGTG-------------------------GCTGGGGGTG----------AAAACCCCCTCCCCTCTTCGCCCGGCTCGCGTTTATCACACAAACACCGTTTATAACAAGTCTAAGAAAGT--CCACGGTCGTAGCGGACCAT-AAACGTGTCTAATACAACTTTTGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCGCCCTCGGT-TTTGTTATCGAAGCCGC--TGGGTCGCGTTGGAACTTGGGGGC----AAGTGCCGGTGGCTCGCGCCGTCGGCTCCCCTTAAAAGCATTAGCGACGAACCTCCGCAGGATCGCGCACTCGGTGTGATAGACT------ATCTACGCCGTCGTGCCATCCCGCGCGCCATCGCGGCGCGCAAAGAGGTTTCTGCCCCAAAGCGGTCGCTCACAGCCGTCTCGCC--TTAAAAAAGCGGACAGCGCTTCGGCGCTCAGCACATCACAAC 'Schizophyllum commune AF348142_CBS_340.81' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC--CTCT-AAAGCCTTCATGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTCT------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGCATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACTGTCTCTTGACTGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum commune AF350925_CBS_405.96' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT-------ACTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACTGAGACTAGCGACTTGTACGC----------TAACTTTTGAC 'Schizophyllum commune MH854681_CBS_103.20' -----------------------------------------------------------------TC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAG--------------------------------------------------------------------------------- 'Schizophyllum commune MH857703_CBS_227.57' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACCGAGACTAGCGACTTGTGCGC----------TAAC-TTTGAC 'Schizophyllum commune MH857808_CBS_342.58' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCCAACCGTCTCTTGACCGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum commune MH859297_CBS_249.69' AACAAGGTTTCC-GTAG{GT}{GT}G{AG}ACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACTGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum commune MH861350_CBS_340.81' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC--CTCT-AAAGCCTTCATGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTCT------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGCATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACTGTCTCTTGACTGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum commune MH861655_CBS_579.83' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACTGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum commune MH862583_CBS_405.96' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACTGAGACTAGCGACTTGTACGC----------TAACTTTTGAC 'Schizophyllum commune MH863418_CBS_124811' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACCGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum fasciatum L43385_CBS_267.60' --------------------------------------------CATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AACGCCTTTACGGGCTGCGG--CTGACTGCGTCTACCTCACA----CCTT--AAAGTATGTCAACGAATGTGATCATGGTCATGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CCTTTGACTTTGGTCTC--AGGGGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCT--------CTACGTCGTTG-------------ACCATCTCGGAGC-TGACCTAGTCAGTTTCAATAGGACTCTGCTTCTAATTGTCTCTCA--CGAGACTAGCGACTTGGTTGC----------TACTTTAAGAC 'Schizophyllum radiatum AY571060_CBS_301.32' ACCAAGGTTTCCGGTAGGTGAACCTGCGGAAGGA---------TCATTAACGAAATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTCT------TGCTGGAGCCTAACGGATCCAGCTCCTCTTAAATGCATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACTGAGACTAGCGACCTGTGCGC----------TAACTTTTGAC 'Schizophyllum radiatum MH855328_CBS_301.32' AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTCT------TGCTGGAGCCTAACGGATCCAGCTCCTCTTAAATGCATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACTGAGACTAGCGACCTGTGCGC----------TAACTTTTGAC Schizophyllum_sp._CSN1160_ITS4_CS30 AACAAGGTTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTTC-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCT{CT}GCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTCTTGACTTCGGTCTC--GAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Schizophyllum_sp._PMM2087_ITS1 ---------------------------------------------------------------------TCTTGTTCTGATCCTGTGCACCTTATGTAGTC----CC-AAAGCCTTCACGGGCGGCGG--TTGACTACGTCTACCTCACA----CCT{CT}--AAAGTATGTTAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTC{CT}AACCGTCTCTTGACCGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC Schizophyllum_sp._PMM2088_ITS1 ------------------------------------------------------------------------------------------------------------------------GGCGGCGG--TTGACTACGTCTACCTCACA----CCTT--AAAGTATG{AT}TAACGAATGTAATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----ATACCATCAACCCT-CTTTTGACTTCGGTCTC--GAGAGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGTATTAGCGGATTTCCCTTGCGGGATCGCGTCTCCGATGTGATAATTT--------CTACGTCGTTG-------------ACCATCTCGGGGC-TGACCTAGTCAGTTTCAATAGGAGTCTGCTTCTAACCGTCTCTTGACCGAGACTAGCGACTTGTGCGC----------TAACTTTTGAC 'Schizophyllum umbrinum AF249391_FL02.1' ----------------------------------------------------------------TCT-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTCACTGCC-AAAGCCTTCACGGGCAGCGGCTCTGACTATGTCTACCTCACA----CCTT--AAAGTATGTCAATGAATGTAATCATGGTCTTGACAGACCCT-AAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----CAACCATCAACCCCACTTTTGACTTCGGTCTC--TGTGGTGGGTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGATCCAGCTCCTCTTAAATGCATTAGCGGAATTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCA--------CTACGTCGTTG-------------ACCATCTCGAAGC-TG--CTAGTCAGTTTCAATAGGA-TCTGCTTCTAACCGTCTCTTGA-CGAGACTAGCGACTTGTGCGC----------TAC-------- 'Schizophyllum umbrinum HQ377288_UFMGCB_1835' ------------------------------------------------TACG-AATCAACAGTCTATCTTGCTTCTTGATCCTGATGCACCTTATGTAGTCACTGCC-AAAGCCTTCACGGGCAGCGGCTCTGACTATGTCTACCTCACA----CCTT--AAAGTATGTCAATGAATGTAATCATGGTCTTGACAGACCCT-AAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATG-AGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATAGCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Schizophyllum umbrinum KR261612_BDNA2316' ------CCTTCC-GTAGGGTGACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTCTCATCTTGTTCTGATCCTGTGCACCTTATGTAGTCACTGCTAAAAGCCTTCACGGGCTGCGGCTCTGACTATGTCTATCTCACA----CCTT-AAAAGTATGTCAATGAATGTCATCATGGTCTTGACAGACCCTAAAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----CAACCATCAACCCCACTTTTGACTTTGGTCTCTTTGTGGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGAGCCAGCTCCTCTTAAATGCATTAGCGGAATTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCA--------CTACGTCGTTG-------------ACCATCTCGGAGC-TG--CTAGTCAGTTTCAATAGGA-TCTGCTTCTAACCGTCTCTAA--CGAGACTAGTGACCTATGTGC---------ACTACTTTTGAC 'Schizophyllum umbrinum MK578040_CCG019' -------TTTCC-GTAGGTGAACCTGCGGAAGGA---------TCATTAACG-AATCAAACAAGTCT-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTCACTGCC-AAAGCCTTCACGGGCAGCGGCTCTGACTATGTCTACCTCACA----CCTT--AAAGTATGTCAATGAATGTAATCATGGTCTTGACAGACCCT-AAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----CAACCATCAACCCCACTTTTGACTTCGGTCTC--TGTGGTGGGTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGATCCAGCTCCTCTTAAATGCATTAGCGGAATTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCA--------CTACGTCGTTG-------------ACCATCTCGAAGC-TG--CTAGTCAGTTTCAATAGGA-TCTGCTTCTAACCGTCTCTTGA-CGAGACTAGCGACTTGTGCGC----------TACTTTTTGAC 'Schizophyllum umbrinum MK578041_CCG020' --------------------------------GA---------TCATTAACG-AATC-AACAAGTCT-ATCTTGTTCTGATCCTGTGCACCTTATGTAGTCACTGCC-AAAGCCTTCACGGGCAGCGGCTCTGACTATGTCTACCTCACA----CCTT--AAAGTATGTCAATGAATGTAATCATGGTCTTGACAGACCCT-AAAAGT---TAATACAACTTTCGACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAA-----CAACCATCAACCCCACTTTTGACTTCGGTCTC--TGTGGTGGCTTGGAAGTGGAGGTC-------TGCTGGAGCCTAACGGATCCAGCTCCTCTTAAATGCATTAGCGGAATTCCCTTGCGGGATCGCGTCTCCGATGTGATAATCA--------CTACGTCGTTG-------------ACCATCTCGAAGC-TG--CTAGTCAGTTTCAATAGGA-TCTGCTTCTAACCGTCTCTTGA-CGAGACTAGCGACTTGTGCGC----------TACTTTTTGAC ; END; [ The following blocks are output data for analysis step 27032 ] BEGIN TREES; TITLE 'Schizophyllum - ITS phylogeny'; LINK TAXA = TaxaForAnalysisStep27032; TREE Imported_tree_1 = [&R] ((Porodisculus_pendulus_AY572009:0.08037753,'Fistulina antarctica DQ486702_CBS701.85':0.33339958):0.29748462,(('Auriculariopsis ampla MH013190_ALV14009':0.00721462,'Auriculariopsis ampla AF141873_FCUG_1803':1.0E-8)94:0.02171063,(('Schizophyllum fasciatum L43385_CBS_267.60':0.03362674,('Schizophyllum commune MH857703_CBS_227.57':1.0E-8,(Schizophyllum_sp._PMM2088_ITS1:1.0E-8,('Schizophyllum commune MH863418_CBS_124811':1.0E-8,((Schizophyllum_sp._PMM2087_ITS1:1.0E-8,'Schizophyllum commune MH857808_CBS_342.58':4.1038E-4)44:0.00129492,((Schizophyllum_sp._CSN1160_ITS4_CS30:0.00302645,'Schizophyllum commune MH854681_CBS_103.20':1.0E-8)10:1.0E-8,((('Schizophyllum commune AF348142_CBS_340.81':1.0E-8,'Schizophyllum commune MH861350_CBS_340.81':1.0E-8)99:0.00546819,('Schizophyllum radiatum MH855328_CBS_301.32':1.0E-8,'Schizophyllum radiatum AY571060_CBS_301.32':0.00170004)92:0.00517853)57:0.00177623,(('Schizophyllum commune AF350925_CBS_405.96':1.0E-8,'Schizophyllum commune MH862583_CBS_405.96':1.0E-8)54:0.00170639,('Schizophyllum commune MH861655_CBS_579.83':1.0E-8,'Schizophyllum commune MH859297_CBS_249.69':1.0E-8)26:1.0E-8)30:1.0E-8)39:0.00180751)20:1.0E-8)2:1.0E-8)2:1.0E-8)4:1.0E-8)96:0.01804151)44:0.00571255,('Schizophyllum umbrinum KR261612_BDNA2316':0.0340403,(('Schizophyllum umbrinum AF249391_FL02.1':1.0E-8,'Schizophyllum umbrinum MK578040_CCG019':1.0E-8)49:0.00173011,('Schizophyllum umbrinum HQ377288_UFMGCB_1835':0.11547969,'Schizophyllum umbrinum MK578041_CCG020':1.0E-8)32:1.0E-8)72:0.00698462)69:0.02285931)31:0.00906822)100:0.29748462); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr128848] END;