#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 29, 2025; 13:25 GMT TreeBASE (cc) 1994-2008 Study reference: Costa M.M., Carmo F.S., Melo M.P., Moreira G.M., Guimarães E.A., Rocha F.S., Abreu L.M., Costa S.D., & Pfenning L.H. 2020. Fusarium species from tropical grasses in Brazil and description of two new taxa. Mycological Progress, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S26793] [ The following blocks are input data for analysis step 28030 ] BEGIN TAXA; TITLE TaxaForAnalysisStep28030; DIMENSIONS NTAX=36; TAXLABELS Fusarium_arcuatisporum_LC12147 'Fusarium atrovinosum CBS_445.67' 'Fusarium brachygibbosum NRRL_340' 'Fusarium chlamydosporum CBS_145.' 'Fusarium chlamydosporum CML_3665' 'Fusarium chlamydosporum CML_3666' 'Fusarium chlamydosporum CML_3667' 'Fusarium chlamydosporum CML_4096' 'Fusarium chlamydosporum CML_4098' 'Fusarium compactum NRRL_36323' 'Fusarium concolor NRRL_13459' 'Fusarium duofalcatisporum CML_36' 'Fusarium duofalcatisporum CML_40' 'Fusarium duofalcatisporum NRRL_3' 'Fusarium hainanense CML_4084' 'Fusarium hainanense CML_4105' 'Fusarium hainanense CML_4106' 'Fusarium hainanense CML_4107' 'Fusarium hainanense CML_4109' 'Fusarium hainanense CML_4110' 'Fusarium hainanense CML_4113' Fusarium_hainanense_LC11638 'Fusarium humicola CBS_124.73' Fusarium_ipomoeae_LC12165 'Fusarium lacertarum CML_4102' 'Fusarium lacertarum CML_4103' 'Fusarium lacertarum CML_4104' 'Fusarium lacertarum NRRL_20423' 'Fusarium microconidium CBS_11984' 'Fusarium nelsonii CBS_119876' 'Fusarium peruvianum CBS_511.75' Fusarium_sp._CML_4092 Fusarium_sp._MRC_35 Fusarium_sp._NRRL_52758 'Fusarium spinosum CBS_122438' 'Fusarium sporodochiale CBS_220.6' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M57761] TITLE Fusarium_brachiaria_tef_FIESC_FCSC; LINK TAXA = TaxaForAnalysisStep28030; DIMENSIONS NCHAR=522; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Fusarium_arcuatisporum_LC12147 ------------------------------------------------TCGACCACTGTGAGTACTA-CCCTCAATGA-CCTGCTTATCAGCAGTCGTCAACCCCCGCCAT--ACGTGGTGGGGTAAATTCAACCTATACATTTGCTGACAAGATTGCAT--ACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTATATTTCCCTCGATCGCACGCCCTC-TGCCCACCGATCCATCACTCGAATCAGTCT-------CGACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGTCCATACCCCGCTACTCGAATGACAG--GCGCTTGCCCTC-TTCCCACATA----AT-------------GTGC---ATCACGTGTCATTCAGCCAACCAGTAACTAACCACCCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium atrovinosum CBS_445.67' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATC--AATTGTGCTGACTTTCATTCCCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCTTTACACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAACCATTATTCATCTGGGCGCGCATTATCACGTGT--------GTATCAGTCACTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium brachygibbosum NRRL_340' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CC----------------------AAGCCTCGA-CCCCGCCTAG-ATTTGGTGGGGTAGTCTCAAGATTCATTCATACTGACATACTTTGATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTCCCTCGATCGCGCGCCCTTTTACCCATCGATCCATCATTCGACTCGCTCTTTCACGACGATTCGATCCGCGCCCGTTACCCCGCTCGAGCTCAAAATTTTTGCGATTCAATCGTAA-TTTTTTTTGGTGGGGCTCATACCCCGCCACTCGAGTGACGGGCGCGCTTGCCCTC-TTCCCAC---AGTCAT-ATTCATATGGGCGCGCATCATCACGTGT--------CTACCAGTCACTAACCACCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium chlamydosporum CBS_145.' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TATGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATT--ATTTGTGCTGACTTTCATTCCTAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAATTTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGAATG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCATTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium chlamydosporum CML_3665' -----TCACCTGAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TATGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATT--ATTTGTGCTGACTTTCATTCCTAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGAATG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCATTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium chlamydosporum CML_3666' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTTGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TATGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATT--ATTTGTGCTGACTTTCATTCCTAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGAATG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCATTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium chlamydosporum CML_3667' ---------------------GTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TATGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATT--ATTTGTGCTGACTTTCATTCCTAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTGCCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGAATG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCATTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium chlamydosporum CML_4096' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TATGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATT--ATTTGTGCTGACTTTCATTCCTAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTGCCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGAATG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCATTAACCATCTGACAATAGGAAGCCG---------------------- 'Fusarium chlamydosporum CML_4098' ----------------------------------------------AGTCGACCACTGTGAGTACCA-CCCTCGACGA-TATGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATT--ATTTGTGCTGACTTTCATTCCTAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTGCCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGAATG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCA--------------------------------------------------- 'Fusarium compactum NRRL_36323' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCAT--ACGTGGTGGGGTTA-ATTAACTTACACATTTGCTGACAAGATTGCATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATTAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAATCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTT--------GCGC---ATCACGTGT--------CAATCAGTCACTAACCACTCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium concolor NRRL_13459' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTAAGTACTA-CCCTCGGCGAGCCCGCTTATCTGCAA--------CCCTGCCTCAGATCTGGCGGGGTATCCTTCAAAGCACAACATGCTGACATCCTCTGATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTAGTCA-CTTTCCCTTCAATCGCGCGCCCTTTAGCCCCTCGATTTCACATTCGAATCGCTCCCAT---ACGACTCGATCAGCGCCGGTTACCCCGCTCGATCCCAAAATTTTTGCGGTTCGACCGTAA---TTTTTTGGTGGGGTATCTACCCCGCCACTCGAGTGACGGGCGTGCTTGCCCTG-TTCCCACAAAAACCAGAAT------GGGCGCGCATCATCACGTGT--------AAATCAGTCACTAACCACTGGACAATAGGAAGCCGCTGAGCTCGGTAAGGGTTCCTT 'Fusarium duofalcatisporum CML_36' ----------------------------------TCGACTCTGGCAAGTCGACCACTGTGAGTACCA-TCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCAT--ACGTGGTGGGGTAAATTCAACTTACACATTTGCTGACAAGATTGCATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCTTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGCTTATGCCCCGCTACTTGAGTGACTG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTTGT-----TGCGC---ATCACGTGT--------TAATCAGTCACTAACCACTCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCT- 'Fusarium duofalcatisporum CML_40' ----------------------------------------------AGTCGACCACTGTGAGTACTA-TCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCAT--ACGTGGTGGGGTAAATTCAACTTACACATTTGCTGACAAGATTGCATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCTTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTTGAGTGACTG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTTGT-----TGCGC---ATCACGTGT--------CAATCAGTCACTAACCACTCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium duofalcatisporum NRRL_3' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCATCCCCCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCAT--GCGTGGTGGGGTAAATTCAACTTACACATTTGCTGACAAGATTGCATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTATAAAAT-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTCGAGTGACTG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTTGT-----TGCGC---ATCACGTGT--------CAATCAGTCACTAACCACTCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium hainanense CML_4084' -----------------------------------CGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GCGTTTGCCCTC-TTCCCACAAA----ATCATGTCT-----TGCGC---ATCACGTGT--------CAATCAGTCA----------------------------------------------- 'Fusarium hainanense CML_4105' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GGGTTTGCCCTC-TTCCCACAAA----ATCATGTCT-----CGCGC---ATCACGTGT--------CAATCA--------------------------------------------------- 'Fusarium hainanense CML_4106' ----------------------------------TCGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GCGTTTGCCCTC-TTCCCACAAA----ATCATGTCT-----TGCGC---ATCACGTGT--------CAATCAGTCA----------------------------------------------- 'Fusarium hainanense CML_4107' ----------------------------------------------AGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGAGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GCGTTTGCCCTC-TTCCCACAAA----ATCATT------------------------------------------------------------------------------------------ 'Fusarium hainanense CML_4109' ----------------------------------------------AGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GCGTTTGCCCTC-TTCCCACAAA----ATCATGTCT-----TGCGC---ATCACGTGT--------CAATCAGTCA----------------------------------------------- 'Fusarium hainanense CML_4110' ----------------------------------------------AGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GCGTTTGCCCT---------------------------------------------------------------------------------------------------------------- 'Fusarium hainanense CML_4113' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTAGACGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAG------ACGACAACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGGGTTGAACCCCGCCACTCGA--GACAG--GCGTTTGCCCTC-TTCCCACAAA----ATCATGTCT-----TGCGC---ATCACGTGT--------CAATCAGTC------------------------------------------------ Fusarium_hainanense_LC11638 ------------------------------------------------TCGACCACTGTGAGTACTA-CCCTAGATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCGT--ACGTGGCGGGGTAGTTTCAAATTGAATATTTGCTGACAAGATTGCAAAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTCCCTCGATCGCACGCCCTC-TACCCACCGATCCATCACACGAACCAGTCTT--ACGACAACTGAATATGCGCCCGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGGAT--TTTTTTTGGTGGGG-TTGAACCCCGCCACTCGAGTGACAG--GCGTTTGCCC---TTCCCACAAA----ATCATGTTT-----TGCGC---ATCACGTGT--------CAATCAGTCACTAATCACCCGATAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium humicola CBS_124.73' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTATTA-CCCTCGACGA-TCTGCTTATCAGTAATCGTGAA-CCCCGCCATA-ACATGGCGGGGTAGTATCAAAAATCATTTGTGCTGACTTTCATTCCCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGTCCTCATACCCATCGATCCATCCTTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA--TTTTTTTGGTGGGGCTTCTGCCCCGCCAATCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAGCCATCATCCACCTGGGCGCGCATCATCACGTGT--------GCATCAGTCACTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT Fusarium_ipomoeae_LC12165 ------------------------------------------------TCGACCACTGTGAGTACTA-CCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCAT--ACGTGGTGGGGTAAATTCAACTTACACATTTGCTGACAAGATTGCATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTT--------GCGC---ATCACGTGT--------CAATCAGTCACTAACCACTCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium lacertarum CML_4102' --------CCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-TCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCACCAT--ACGTGGTGGGGTAAATTCAACTTATACATTTGCTGACAAGATTGTATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAATCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTT--------GCGC---ATCACGTGT--------CAATCAGTCACTATC------------------------------------------ 'Fusarium lacertarum CML_4103' ----------------------------------------------AGTCGACCACTGTGAGTACTA-TCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCACCAT--ACGTGGTGGGGTAAATTCAACTTATACATTTGCTGACAAGATTGTATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAATCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTT--------GCGC---ATCACGTGT--------CAATCAGTCACTAACCACCCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCT- 'Fusarium lacertarum CML_4104' ----------------------------------------------AGTCGACCACTGTGAGTACTA-TCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCACCAT--ACGTGGTGGGGTAAATTCAACTTATACATTTGCTGACAAGATTGTATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAATCGTAA---TTTTTTGGTGGGGCTTATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTT--------GCGC---ATCACGTGT--------CAATCAGTCACTA-------------------------------------------- 'Fusarium lacertarum NRRL_20423' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-TCCTCAATGA-CCTGCTTATCAGCAGTCATCAA-CCCCGCCAT--ACGTGGTGGGGTAAATTCAACTTATACATTTGCTGACAAGATTGTATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTCCATTTTCCTCGATCGCACGCCCTC-TGCCCATCGATCCATCACCCGAATCAGTCT----CGACGACTGAACATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAATCGTAA---TTTTTTGGTGGGGCTTACACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCACTT--------GCGC---ATCACGTGT--------CAATCAGTCACTAACCACCCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium microconidium CBS_11984' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACAA--CCTCGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCAAT-ATATGGCGGGGTAGTATCAAAAATCATTTGTGCTGACTTTCATTTCCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTCATACCCATCGATATATCATTCGAATCGCTCTTTCACGACGACTTGACAAGCGTCCGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA--TTTTTTTGGTGGGGCCTCTACCCCGCCACTCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAGCCATTATTCATCTGGGCGCGCATCATCACGTGT--------GTGTCAGTCACTAACAATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium nelsonii CBS_119876' ----------------TCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA--CCTCGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCAAT-ATATGGCGGGGTAGTATCAAAAATCACTTGTGCTGACTTTCATTCGCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTCATACCCATCGATACATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGTCCGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA-TTTTTTTTGGTGGGGCCTCTACCCCGCCACTCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAATCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCACTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium peruvianum CBS_511.75' --GACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATTAAAAATCATTTGTGCTGACTTTCATTCTCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTATACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCTTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCATAA-TTTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGACGG--CCGCTTACCCTCTTTCCCACAAAAACCATCATTCATCTGGGCGCGCATCATCACGTGT--------GTATCAGTCACTAACCATCTGATAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT Fusarium_sp._CML_4092 AAGTGTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTTAATGA-CCTGCTTATCAGCAGTCATCAACCCCCGCCAT--ACGTGGTGGGGTAAATTCAACCTATACACTTGCTGACAAGATTCCATAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTACATTCCCCTCGATCGCACGCCCTC-TGCCCACCGATCCATCACTCGAATCAGTCT-------CGACTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAT-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGTCCATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCTT----------GTGC---ATCACGTGT----CAGCCAATCAGTCAC---------------------------------------------- Fusarium_sp._MRC_35 AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-CCCTCGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATC--AATTGTGCTGACTTTCATTCCCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTACACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA--TTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAACCATTATTCATCTGGGCGCGCATTATCACGTGT--------GTAGCAGTCACTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT Fusarium_sp._NRRL_52758 AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACTA-CCCTCAATGA-CCTGCTTATCAGCAGTCATCAACCCCCGCCAT--ACGTGGTGGGGTAAATTCAACCTATACATTTGCTGACAAAATTGCTTAGACCGGTCACTTGATCTACCAGTGCGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTTTACATTTCCCTCGATCGCACGCCCTC-TGCCCACCGATCCATCACTCGAATCAGTCT-------CGATTGAATATGCGCCTGTTACCCCGCTCGAGTACAAAAA-TTTGCGGTTCAACCGTAA---TTTTTTGGTGGGGTCCATACCCCGCTACTCGAGTGACAG--GCGCTTGCCCTC-TTCCCACAAA----ATCTT----------GTGC---ATCACGTGTCATTCAGCCAATCAGTAACTAACCGCTCGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium spinosum CBS_122438' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTACCA-TCCTTGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCATA-TTATGGCGGGGTAGTATCAAATATCATTGGTGCTGACTTTCATACCCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCCCGATCGCGCGCCCTTACACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA--TTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAACCATCATTCACCTGGGCGCGCATCATCACGTGT--------ACATCAGTCACTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT 'Fusarium sporodochiale CBS_220.6' AAGACTCACCTTAACGTCGTCGTCATCGGCCACGTCGACTCTGGCAAGTCGACCACTGTGAGTATTA-CCCTCGACGA-TCTGCTTATCAGCAATCGTGAA-CCCCGCCATA-ATATGGCGGGGTAGTATCAAATC--ATTTGTGCTGACTTTCATTTCCAGACCGGTCACTTGATCTACCAGTGTGGTGGTATCGACAAGCGAACCATCGAGAAGTTCGAGAAGGTTGGTCT-CATTTTCCTCGATCGCGCGCCCTTACACCCATCGATCCATCATTCGAATCGCTCTTTCACGACGACTCGACAAGCGCCTGTTACCCCGCTCGAGCTCAAAAATTTTGCGGTTCTGTCGTAA--TTTTTTTGGTGGGGCTTCTGCCCCGCCACTCGAGTGACGG--GCGCTTACCCTC-TTCCCACAAAAACCATTATCCATCTGGGCGCGCATTATCACGTGT--------GTATCAGTCACTAACCATCTGACAATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTT ; END; [ The following blocks are output data for analysis step 28030 ] BEGIN TREES; TITLE Fusarium_brachiaria_tef_FIESC_FCSC; LINK TAXA = TaxaForAnalysisStep28030; TREE PAUP_1 = [&R] (('Fusarium brachygibbosum NRRL_340':0.038898,'Fusarium concolor NRRL_13459':0.177367):0.0134985,((('Fusarium nelsonii CBS_119876':0.00639,'Fusarium microconidium CBS_11984':0.017043):0.01387,('Fusarium humicola CBS_124.73':0.023572,('Fusarium spinosum CBS_122438':0.021157,(('Fusarium sporodochiale CBS_220.6':0.008305,('Fusarium atrovinosum CBS_445.67':0.002042,Fusarium_sp._MRC_35:0.002071):0.002098):0.008411,('Fusarium peruvianum CBS_511.75':0.014462,('Fusarium chlamydosporum CBS_145.':0.0,('Fusarium chlamydosporum CML_3666':0.002041,('Fusarium chlamydosporum CML_3665':0.002063,('Fusarium chlamydosporum CML_3667':0.0,('Fusarium chlamydosporum CML_4096':0.0,'Fusarium chlamydosporum CML_4098':0.0):0.0):0.002041):0.0):0.0):0.012728):0.0):0.0):0.003884):0.002039):0.055722,((Fusarium_hainanense_LC11638:0.007271,('Fusarium hainanense CML_4105':0.004722,('Fusarium hainanense CML_4113':0.0,('Fusarium hainanense CML_4107':0.005363,('Fusarium hainanense CML_4106':0.0,('Fusarium hainanense CML_4084':0.0,('Fusarium hainanense CML_4109':0.0,'Fusarium hainanense CML_4110':0.0):0.0):0.0):0.0):0.0):0.0):0.002814):0.051053,((Fusarium_sp._NRRL_52758:0.009687,(Fusarium_sp._CML_4092:0.019268,Fusarium_arcuatisporum_LC12147:0.014487):0.0):0.025205,('Fusarium compactum NRRL_36323':0.011224,(('Fusarium duofalcatisporum NRRL_3':0.010906,(Fusarium_ipomoeae_LC12165:0.0,('Fusarium duofalcatisporum CML_36':0.006665,'Fusarium duofalcatisporum CML_40':0.0):0.008976):0.0):0.0,('Fusarium lacertarum NRRL_20423':0.00217,('Fusarium lacertarum CML_4102':0.002349,('Fusarium lacertarum CML_4103':0.0,'Fusarium lacertarum CML_4104':0.0):0.0):0.002245):0.01113):0.0):0.01023):0.018599):0.098068):0.0134985); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr128400] END;