#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on November 10, 2026; 4:15 GMT

TreeBASE (cc) 1994-2008

Study reference:
Lartillot N., & Philippe H. 2006. Computing Bayes Factors Using Thermodynamic Integration.
Systematic Biology, 55(2): 195-207.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1452]

[ The following blocks are input data for analysis step 2807 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep2807;
        DIMENSIONS NTAX=30;
        TAXLABELS
            Aquifex_aeolicus
            Bacillus_subtilis
            Bacteroides_thetaiotaomicron
            Bdellovibrio_bacteriovorus
            Bifidobacterium_longum
            Burkholderia_fungorum
            Campylobacter_jejuni
            Chlamydophila_caviae
            Chlorobium_tepidum
            Chromobacterium_violaceum
            Clostridium_botulinum
            Coxiella_burnetii
            Escherichia_coli
            Fusobacterium_nucleatum
            Geobacter_sulfurreducens
            Gloeobacter_violaceus
            Helicobacter_hepaticus
            Lactococcus_lactis
            Leptospira_interrogans
            Magnetococcus_sp
            Parachlamydia_sp
            Pirellula_sp
            Rubrobacter_xylanophilus
            Sinorhizobium_meliloti
            Synechocystis_sp
            Thermoanaerobacter_tengcongensis
            Thermobifida_fusca
            Thermotoga_maritima
            Treponema_denticola
            Zymomonas_mobilis
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M981]

	TITLE UVR;
	LINK TAXA = TaxaForAnalysisStep2807;
	DIMENSIONS NCHAR=719;
	FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -;

MATRIX
[                                            10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710         ]
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Aquifex_aeolicus                     IVIRGARQHNLKNIDVEIPKNKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGVMEKPEVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYLRVLWANVGKPHCPHCGNLLSGLSK?GKRVMILSPIVRGKKGGYSRVKVDKKHTIELVIDRRLLEDVEKHGFSIPELSARLFSFNSPYGACPSCKGLGVKWEIDAVKAVKIIANVIRKLGYPWKKLFEGIIPHLERYIVEKPCPECKGARLRKEALAVLIIWDVVNMPVGKAKEFFIADRLLKEIIERLGFLVNVGLDYLSLSRSATTLSGGEMQRIRLATQLGSKLTGVLYVLDEPSIGLHPRDTSKLINTLKGLRDLGNTVVVVEHDPETIESADHVIELGPGAGKHGGYLVAQGTSLTGAYLSGRKEIPVPKERRRAKEHNLKNINVDIPLGLFVCITGVSGSGKSTLIYDILYKYAKNYFENIDKVINIDQSPIGRTPRSNPATYTKVFDLIRNLFAQTPEAKARGYKPGRFSFNVKGGRCEACQGEGVIKVEMHFLPPVYVTCEVCKGKRYNRETLEITYKGKNIADVLEMTVDEAYDFFPAIRRKLQILKDVGLGYIKLGQPAPTLSGGEAQRIKLARELSKKETGRTLYLLDEPTTGLHMDDVKKLIDVLQRLVDKGNTVVVIEHNLDVIKCADWIIDLGPEGGERGGQVVAVGTPESYTGKYLRKYL
Bacillus_subtilis                    IEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTPERTKLQVLAPIVSGRKGGYVRVRIDKKHSIEVVIDRRLSDSLETCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDSLKENAVLEAVCTHYGIPVKDLFEGVLRNIERYMSQKSCPTCKGYRLKKEALAVLIIGKITELSVADALAFFIANLILREIVERLSFLDKVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDIGPGAGIHGGQVISAGTSLTGSYLSGKKFIPLPPERRGASENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVNEILHKALAQKLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPESYTGRYLKPVI
Bacteroides_thetaiotaomicron         ISIKGARVNNLKNIDVDIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSYARQFLGRMSKPECDFIKGIPPAIAIEQKVNSRNPRSTVGTSTEIYEYLRLLYARVGRTYSPVSGEEVKKHSPEGTRYTVLTPIRLREDRGFNRVEVN???????LVDRRLTDSAETDGITFEEPNDQMFSFNSPIGACPVCEGFGKVIGIDSVYEGAIIHNA?DKFDFPYYELFHG?INDFFKYRGKTICPKCHGTRLKPEAGYVRVISELVDLPITELKEFFVARRILIEINSRIRFLIDVGLGYLTLNRLSNSLSGGESQRINLATSLGSSLVGSLYILDEPSIGLHSRDTDRLIRVLRQLQELGNTVVVVEHDEEIIRAADYIIDIGPNAGRLGGEVVYQGDSHTVRYLLGEEEIPVPEHRRGARENNLKGVNVKFPLNVMTVVTGVSGSGKSTLVRDIFYRALKRELRDLRNIEFVDQNPIGKSSRSNPVTYIKAYDEIRKLWAEQPLAKQMGYTAGHFSFNSEGGRCEECKGEGTITVEMQFMADLVLECESCHGKRFKADTLEVKFQDKNIYDVLEMTVNQAVEFFKKIVKRLLPLQDVGLGYIKLGQSSSTLSGGENQRVKLAFYLSQEKADPTLFIFDEPTTGLHFHDIRKLLDAFDALIRRGHSIVIIEHNMDVIKCADYVIDLGPEGGDKGGNIVAVGTPESYTGQFLKEKL
Bdellovibrio_bacteriovorus           IHLWGVKQNNLKNIEVKIPVGSMTVICGPSGSGKSSLAFETLFAEGQRRFIESMSNYARQFLNKAPKPDIEGINNIPPAISIEQKNTVKSSRSTVGTTTEIIDYLRLLYEKIGKSYCPTHHCPTEKESFAGKRGYLLVEINSEGRVGYLRIYIPPKETFYLVIDRRLADSLTQCGYTPPPLSSKLFSFNSPIGACPTCKGFGNILDIDSLAQGALLA?YCKKTKIPWKDLFE?YLDQIKYFRSPFQCPTCKGARLRTEANHVLIINDLSNLTIEDLNTFFVAGEVLKQIRSRLEFLMRVGVHYLSLGRETRTLSGGEYQRLILANQLGMGLSQALYVLDEPTVGLHPRDNDRLISILKDLKDLGNTLVIVEHDHDVIKASEHIIEMGPGSGYLGGEVVYSGTSNTVPFLKPSKNWQALRTIRGAKGHNLKNLDVTFPLNRLVTVTGVSGSGKSTLISKTLYPALARALEHIKNVLLIDQSPIGKSARSSPITYLKAFDAIRMIMSTTPESQSRGYTAGTFSLNVDGGRCPACKGTGYEEIDMMFMDNVVIPCDVCDGKKYRPEILEIQYKNKNIHEILSMTVNEAMNFFPNIRKPLSVLKEVGLDYLQLGQPANSLSGGESQRLKIAKELSQVQQKSTLYILDEPTTGLHFREVELLMKVLNKLIETGGSVVVVEHNLDVIRGSDYVIDLGPEAGKKGGNIVATGTPDSLTGQYLKRYI
Bifidobacterium_longum               ITIQGAREHNLKNVDLAIPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGIPHCPECGEPVASQTPERTRFQILSPVVKGRKGGYARALIDKKHTIEVVVDRRLTDSVETHTLELDEVEPRTFSFNAPYGACPACTGLGFKLEIDSLADGVILEGLAKEMGFPWKGLFEGVIRTLMRYMREVPCQVCHGRRLKPEVLAVTVIFDVCDMPVVRELAWIIAGEVLKEIKARLGFLNDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLIETLHHLRDLGNTLIVVEHDEDTIRRADWVVDIGPGAGERGGEVIYSGPSITGDYIAHRREIAVPAKRRGARENNLKNIDVSFPLGVLTVVTGVSGSGKSSLVNTILYPVLADKLDQVRKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVRGYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVDCEVCHGKRYNRETLEVTYNGKTVADILNMPIEEAADFFTGISRYLKTLVDVGLGYIRLGQPAPTLSGGESQRVKLATELQRRSDGKTVYILDEPTTGLHFEDVNKLLKVLQSLVDKGNTVIVIEHNLDVIKEADWLIDLGPEGGDGGGTIVTQGTPESWTGKFLKPML
Burkholderia_fungorum                IRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYCPDHEIPLEAQSPDETKLMILAPVVANRKGGFIRFRVRDKHTIDVVVDRRLAESFETCSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDSLAAGAVLQSLAAFYEFAVEDLFEGIIPNLERYQNNQPCPACAGTRLRREARFVRIIFEISGWPLRDALGYFIADKVVKEIVARLMFLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIATLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTSMTGQYMSGARNIEFPDERKEAYGNNLKHVSLDLPVGLLTCVTGVSGSGKSTLINDTLYHAVAHHLEHFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPAAKERGYEAGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKRYNRETLDVQYKGRNISEVLDMTVENAYEFFPVVARKLKTLLDVGLGYIRLGQSATTLSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEHNLDVIKTADWVIDLGPEGGAGGGQIVAQGTPESFTGKYLAPLL
Campylobacter_jejuni                 IKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCHRCGQKISSMSPKGAKIIIYSPLIREKKGGYVRAQIDKKHTIKLVIDRRLASDIEKCKISFVPLEPLSFSFNSPKGACEACDGLGIRYTLDSLENGAVLIAFCEQNEIPFMQLFEGVVKMAYEYMSEKICKDCGGHRLKPESLAVKVLGEILDMSIEDSTAFFISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGEVVFSGTSETALYMNGKKQIS??QLQNNVNINNIQDLSVKFPLQNLVAITGVSGSGKSSLILQTLLPFAQEELEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVVCDTCGGKRYNDATLEIKYKGKNISEILNMSVLEASEFFPKIKQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVESYTGYYLDLEL
Chlamydophila_caviae                 VHISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYVATLPAFFATNLSPLPDPTVEKIHGLSPTIAVKQNHFAYHAHSTVGSAAELSQHLALLFSLDGEARDPHTKQTLHLQSPEGTQVTILAPLINI???GYTKIRIDEESPVAIVVDSRMKVSLFSTQQTYAPLTPQVFSPHSLEDRCTQCQGSGIYITIDSIRENCCYQSLADTLNFPWKDLWRGILNEIGE?TSATSCPTCQGTGIGEYACAATWFVEFQKMPLDEFFSFT???EVLDGLNNRLSILINLGLSYLTPERTLATLSGGEQERTALAKHLGAELSGITYILDEPSIGLHPRDTHKLIQVIQKLRDQGNTILLVEHDEQMISFADRIIDIGPGAGIFGGEVLFNGTSLTASYLRHELTIDIPVRR?HATINNLKDITISLPLERITAVTGVSGSGKSSLINDTLVPAMERVIGTIERVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQQPKSKRLGLTKGHFSFNLSLGACTECQGIGSITLDNH????TPIPCPLCHGKRFQPQILEVRYQGKNIADILAMTAYEAEKFFPHIHEKIHALCSLGLDHLPLGRPLSSLSGGEIQRLKLTYELLAPSKKPTLYILDEPTTGLHTHDIHALIHVLQSLTQQGHTVVVIEHNMHIVKIADYVIELGPEGGNLGGYLLASCTPETPTAKALQPYF
Chlorobium_tepidum                   ?MLGGVSTHNLKHVTVRIPRNRFVVLTGLSGSGKSSLAFDTLYAEGHRRYVESLSAYVRQFLERMPKPEIETVEGIAPAIAIEQKAIPKNPRSTVGTVSEIYDYLRLLYARIGKIYSRDTGELVLKHTGTRFYVGYPFPSHHDERHGFFRLLKGELSELLVLVDRRVAQAAES?GVTYQEPSPQLFAFNSPIGACTSCQGFGRIAGIDSLKEGAILLKIAPEVGIPYEKLFKGLWPFFEEYRGYATCPECEGARLNPDALQVRVIGEVVRMTIADAQTFFVADSVLREINKRLGYLMDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLHQSDSARLVALLKRLRDLGNTVVVVEHDREIIEAADEVIDLGPRAGRLGGEVVFHGPSLTADYLSGRKQIAVPAERRGAMQNNLRNIDVRFPLGVMTCVTGVSGSGKSTLVNDILKLGIIRAKEFIEKVEHVDQSPIGKSSRSNPATYLKIFDDIRQLFASTRESKSRGWKPGYFSFNIPGGRCETCAGEGTVKIEMQFLADIEAVCEECEGKRYKASTLEVKYNGLSISEVLDLTVEEAISFFKSIQKKLQVLQEVGLEYIRLGQSSSTLSGGEAQRLKLASFISRSDVSNTLFIFDEPTTGLHFDDISKLVRCFEELMARGNTLVIIEHNPDIIKQADWIIDLGPGAGVRGGDIVAVGTPESLTGRHLRGYL
Chromobacterium_violaceum            IRIRGARTHNLKNVNLDLPRNQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGDPHCPDHNVPLSSQTPEETRVMILAPVIVGRKGGFVRVRVDKKHTIEVVIDRRLAESFETCSYSLPELEPRLFSFNNPMGACPKCDGLGEITFFDSLASGAILLALGEHYGFAFDDLFEGIIPNLERYQNNQACPHCSGSRLRLEARHVFILHEINQLPLKETAQFFVAEKIVKEIRERVSFLNNVGLDYLNLSRSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLGTLKRLRDLGNSVIVVEHDEDAIREADYLVDMGPGAGEHGGEVLVAGTSVTGAFLSGRRKIALPGGRRGATGNNLKDVTLKLPLGGLVCITGVSGSGKSTLINDTLYKIAARDLDQLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFSGVPLARERGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEVQYKGKSIQEVLEMTVEQALEFFPPVARKLKTLMDVGLGYIRLGQSATTLSGGEAQRVKLGLELSKRDTGRTLYILDEPTTGLHFHDIDLLLQVLHRLRESGNTVVVIEHNLDVVKTADWLIDLGPEGGAGGGQIIASGTPESHTGRYLAPLL
Clostridium_botulinum                IIIKGAKVNNLKNINLQLPRDKYIVFTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGQMDKPEVDYIEGLSPAISIDQKTTNRNPRSTVGTVTEIYDYLRLLYAKIGKPHCPKCGKEITQQTEERTKIQVLSPIINGRKGGYVRARIDKKHTIEAVVDRRLADSMETCNISIGEIAPRMFSFNSPYGKCDKCDGLGTLMEIDSIVEGAILKALSKEYKFPIEKLYEGVINNLRRYMSDNPCPKCKGARLHDEALSVTVIFEFCNMSIKKELDFIISNQILKEIRSRLKFLIDVGLDYLTLSRNASTLSGGESQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNDRLIKTLKNLRDLGNTLVVVEHDEDTIREADYIVDIGPGAGEHGGEVVAAGTSITGQYIKGVRTISVPKERRGARENNLKNVSAKFPIGLFTCVTGVSGSGKSTLVNEILYKGIHKKLENVDKVINIDQSPIGRTPRSNPATYTGVFDIIREVFSNTQEAKMRGYKPGRFSFNVKGGRCEACTGDGIIKIEMQFLSDVYVPCEVCKGKRYNRETLEVKYKGKNISDVLNMTVEEALDFFPRIKSKLQTLMDVGLSYIRLGQSSTQLSGGEAQRIKLAYELSKRSTGKTLYILDEPTTGLHMEDVNKLISILQRLTNSGNTVVVIEHNLDVIKNADYLIDLGPEGGEKGGTIIAEGTPESYTGQYLKKML
Coxiella_burnetii                    IQLRGVRTHNLKNIDLDLPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSMMEKPEVDVIEGLSPAIAIEQKSASHNPRSTVGTITEIYDYLRLLYARIGQPCCPLHHHALQAQTPEGTAVMLLAPVVRERKGGFIRARIDKKHTIEVVVDRRLAESFETCGYSLEELEPRLFSFNNPMGACPSCDGLGVQQYFDSLANGAILSSLAKHFGFPYSRLFEGIIPIMERYLTMSECETCQGSRLRKEARHVFLLPEITAMSIGNALQFFIAEKILKEVNARLGFLVNVGLNYLNLARSAETLSGGEAQRIRLASQIGSGLVGVMYILDEPSIGLHQRDNERLLKTLKRLRDLGNTVIVVEHDEDAIRTADYVVDIGPGAGVHGGEIVAEGSSLTGQYLSGKKTIPVPKKRRGARCNNLKNVDVEIPIGLMTCITGVSGSGKSSLISDTLYPIVASRLEYLDKVVEIDQSPIGRTPRSNPATYTGIFTPVRELFAGTPESRARGYLPGRFSFNVKGGRCEACEGDGVIKVEMHFLADIYVVCDVCKGKRYNRETLEIQYKGKNVYDVLQMTVEDAREFFPVIARKLQTLIDVGLSYITLGQSATTLSGGEAQRIKLSRELSKRETGRTLYLLDEPTTGLHFHDILQLLTVLHRLRDGGNTIVIIEHNLDVIKVADWIIDMGPEGGDAGGHVVVTGTPESHTGRFLKPVL
Escherichia_coli                     IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTPEGKRLMLLAPIIKERKGGYIRARIDKKHTIEVVVDRRLAESFETCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDSLAGGAILKSLADHYKFPWGSLFEGVLHNMERFISNRPCA?CEGTRLRREARHVYVLPAISDMSIGHAMEFFIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPSLTGQYMSGKRKIEVPKKRVGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV??ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPESHTARFLKPML
Fusobacterium_nucleatum              ITIKGARQHNLKNIDIELPKNEFIVITGVSGSGKSSLAFDTIYSEGQRRYVESLSAYARQFIGQMNKPEVDSIEGLSPAISIEQKTTNRNPRSTVGTITEVYDYLRLLFAHIGTAHCPICHTAVEKQSDDGSKIILLAPVVKDKKGGFVRARVNKKHNIEVVVDRRLTQSIETEDVSIPELNPRLFSFNAPYGACPECKGLGKKLEVDSIEDGGMFKAMAKVAKIPVKDLYEGAVKNLERYMVERICKVCNGKRLKDEVLAVTVIMEICDMSIKNSLDFFIAKEILKEIRERLTFMTNVGLDYLTLSRETKTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLNRLKELGNTLIVVEHDEDTMMQADKILDIGPGAGEFGGDIVAFGSSITGKFLSGKEAIDIPKKRRGAKGNNLKNIDVEFPLGVMTVVTGVSGSGKSTLINSTLYPILFNKLNALEKVINIDQTPIGRTPRSNPATYTKLFDDIRDIFAETQDAKLHGFKKGRFSFNVKGGRCEACQGAGILKIEMNFLPDVYVECEVCKGKRYNKETLDVYYKGKNIYDVLEMSVLEAYEFFPSLERRLKVLIDVGLDYIKLGQPATTLSGGEAQRIKLATELSKMSKGNTVYILDEPTTGLHFQDIKKLLEVLNRLLEKGNTVIIIEHNLDVIKTADHIIDIGVDGGENGGTVVATGTPESYTGKYIAKIL
Geobacter_sulfurreducens             IIVKGACEHNLKCIDVEIPRDKLVVITGISGSGKSTLAFDTIYAEGQRRYVESLSAYARQFLEQMEKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHPHCYECGKPITSQTPAGTRLQLLSPMVRGRKGGFARVIVDKKHDIDIVVDRRLADSLETCGISYPEMTPRMFSFNNPYGACPDCTGLGTRMYFDSIREGAILDALAKAFDFPFKELFEGVIPNLERYMNVMPCPTCQGARLKREALHVKVIRQVTALSIKDALEFFIARRILKEIRERLHFLVNVGLDYLSLDRTSGTLSGGEGQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNGRLLQTLKHLRDIGNTVLVVEHDEETILEADHVLDMGPGAGEHGGRVVAQGTSLTGRYLSGELTIAVPKKRRGAAENNLKDVTVDIPLGVMTCVTGVSGSGKSTLVIDTLYKVLGQRLEQLDKVINIDQSPIGRTPRSNPATYTGVFADIRDLFAQLPESKVRGYKPGRYSFNVKGGRCEACAGDGIIKIEMHFLPDVYVQCEVCKGARYNRETLEVTYKGKSIAQVLDMTVSEALRFLPKVKAKLQTLEEVGLGYIRLGQSATTLSGGEAQRVKLAKELARRATGRTIYILDEPTTGLHFHDIAKLLEVLRKLVEGGNTIVIIEHNLDVIKTADYIIDLGPEGGDRGGEVIATGTPESYTGQYLRKML
Gloeobacter_violaceus                IHVQGARQHNLKNISLKIPRNQLVVITGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVDHIDGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGKPFCPVCGLPIEPQTPEGTRFQLLAPVVRGKKGGFVRVRVDQSHTVEIVVDRRLADSLATHGSVMEELSPRMFSFNSPYGACPSCHGLGAIQEFSKPVSEAVLKSLGKQLGFPWHLLFEGVIPGLKRYIVSQPCAECKGTRLKPQVTAVKIILEFTSVPIDTCLGMLIAHEVLREIRARLQFLVDVGLEYLTLDRSANTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLLRTLFRLRSLDNTLLVVEHDEDTMRAADHLIDIGPGAGVHGGRVVAQGTSITGAYLSGRRRIETPAARRGASRNNLRSVDVEIPLGKFVCVTGVSGSGKSTLINEILYPYLKHHFAHLDKVIVIDQSPIGRTPRSNPATYTGAFDAIREIFSMTIEAKARGYEPGRFSFNVKGGRCEACKGEGVNVIAMNFLPDVYVQCDVCKGKRYNRETLQVKYKNKTIADVLEMTVEEACQFFPKAINKLETLRQVGLDYIRLGQPAPTLSGGEAQRIKLATELSRRSTGKTLYLLDEPSTGLSFYDVHKLLDVLVKLVDTGNTVVVIEHNLDMLRVCDWIIDLGPEGGRKGGQIVATGTPESYTGQFLRRVL
Helicobacter_hepaticus               IHITGARENNLKNINLSIPKNQLVVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSSYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYFRLLYARVGKQHCHLCGDEISQMSPANAKMILLAPIVKEKKGGYVRAMVDKKHSIKVVIDRRIAQGVEKCKISFEELEPLGFSFNSPKGACEDCLGLGAKYAIDPLNKGGIFYAFCKSAKISFEELWKGIIQIAYDYTTERVCPTCKGHRLKLSSLSVKVIGELIDMPIEKVYEFFIAQPILKEIRERLFFLYDVGLGYLTLGRDARSISGGESQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLRLIKTLRSLQEKGNSVIVVEHDKETILNADYVVDIGPEAGLRGGEVVFSGNTLTAMYLKGAKIISYPHKRTNVNINNIHNLCTKIPLSQFVCVTGVSGSGKSSLILQTLLPVAQELLEYLDKVIYLDQSPIGRTPRSNPATYTGVMDDIRALFAEIKESKLRGYSVGRFSFNVKGGRCEKCQGEGEIKIEMHFLPDVMVKCDACKGAKYNPQTLEIAYKGKNIADVLAMSVDEALEFFPKIATRLQTLQDVGLGYITLGQNAITLSGGEAQRIKLAKELSRKDTGKTLYVLDEPTTGLHFADVDRLTKVLHHLVDLGNSVIVIEHNLDMIKNADYIIDIGPEGGSGGGKIIDSGSVESYTGKFLALEL
Lactococcus_lactis                   IVIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCVNGHGKISAQSPEKTRLQILAPVVRTKKGGYVRVRVDKKHNIEIVIDRRLFDSVEACGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEPDTLREGAILEQAMEQFGIPWEKLFVGVIPNLWRYMTELTCTTCHGYRLNDQALSVKVIAEFSILSIGDTLDYVIAKPILKEIKDRLTFLKNVGLDYLTLSRSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTLIVVEHDEDTMMAADWLIDVGPGAGDLGGEIIASGTSLTGQYLSGKRAIPVPEKRRGASENNLQNLDVEFPMGVMTAVTGVSGSGKSTLVNSILKKSLAQKLEGIERLIDIDQSPIGRTPRSNPATYTSVFDDIRDLFANTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKGKNISEVLDMRVSDGLEFFPKIERKLQTIVDVGLGYVTLGQSATTLSGGEAQRMKLASELQKRSNGKAFYILDEPTTGLHSEDIATLIQVLDRLVEQGNTIVVIEHNLDVIKTADYIIDLGPEGGAGGGTILAKGRPESYTGQYLKAKL
Leptospira_interrogans               IRIRGAREHNLKNINVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMEKPDLDLIEGLSPAISIEQKTTHRNPRSTVGTVTEIYDYLRLLYARVGKPHCPECGTPIQSMSPQGSKLQILAPVISGKKGGFNRVRINFKTSIEIVVDRRLADSVETHDIGFTELSPRMFSFNSPYGACETCDGLGSLLEFDSLVDGCILKSLSDSLKFPWKDLYEGVIPNLQRYMTNHPCPSCKGKRLKRESLSVKVVDEFTSYSIEKALNFVIAKPILKEIHQRLSFLNDVGVGYLTLERSAGSLSGGEAQRIRLATQIGSRLMGVLYILDEPSIGLHQRDNTKLVSTLKNLRDLGNTVLVVEHDQETMEESDWLIDMGPGAGVHGGSIVCAGTSLTGKYLSGRLKVPIPAKLRGAKENNLKNIDVNIPLGKLVVITGVSGSGKSTLINDILYNAAAHKVENIDKIINIDQSPIGRTPRSNPATYTGLFTPIREMFAGLEEAKLRGYGPGRFSFNVSGGRCETCEGDGILKIEMHFLPDVYVTCEVCKGKRYNQETLEVRYKGKNIFDVLEMTVEDANQFFPIVKRKLETLLEVGLGYIRLGQPATTFSGGEAQRIKLATELSKRPTGKTLYILDEPTTGLHFEDVRRLSEVLHTLVDRGNSMIVIEHNLDVIKQADWIVDMGPEGGDGGGLVIAEGIPKSYTGQYLKKIF
Magnetococcus_sp                     IIIRGAREHNLKNIHVEIPRNALTVITGVSGSGKSSLAFDTLSAEGQRRYVESLSAYARQFLSLQNKPDVDAIEGLAPSISIEQKSTSKNPRSTVGTVTEIYDYLRLLYARVGRPYCYGCGRPIESQTPERTRLLLLAPIVQGRKGGFTRVVIDVKHSIEILVDRRMADSLETCNISYPEIEPRLFSFNNPFGACPSCDGLGTQEFFDSLREGAILYTLAEHFEIPWQALWEGVIHTMERYRNATPCTACQGKRLRKEALHVKVLAEFTALPLREAQRAIIAERILKEVTDRLNFLIAVGLDYLTLDRTAGTLSGGESQRIRLANQIGSGLVGVLYILDEPSIGLHQRDNQRLLDTLVRLRDLGNTVVVVEHDEDAIRTADYVVDMGPGAGEHGGQVVAAGTSLTGHYLNGQQTIPVPQQRREVSTHNLQCVTTHIPVGLLTCITGVSGSGKSSLVLDTLYPALAQRLSQLDKVIHMDQSPIGRTPRSNPATYTGLFTPIRELMAATEEARARGYKSGRFSFNVKGGRCEACAGDGLVKIEMHFLPDIFVQCDVCHGARYNRESLEVHYKGKNIAEILNMTIEEALAFFHALRGRLQTLMDVGLSYMRLGQSATTLSGGEAQRVKIARELSKRSTGKTLYILDEPTTGLHFDDIRKLVEVLQRLVEAGNTVVVIEHNLDVIKTADWIIDLGPEGGSHGGQILIEGQPESWTGRYLKPFL
Parachlamydia_sp                     INLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQARPWIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYSPATGKKLSRFTSAGSRLQLIAPIK?LVKEGFIRMRINISN?LEVVVDRRLAPSVETTGFSFAPLEAGDFNFNSPKGACAACNGLGGREQVNPLLDQ?ILKALWKILNLFIKDIWKGLIPVLNEFIDWQTCSSCLGGRLKPESLACLIIYQLCSLTVAECLIKIIVKEILPHIQSRLEFLDQVGLGYLTLTREGKTLSDGEAHRIQLASQIGAKLSGIIYILDEPSLGLHRQDIQHLHKVIHELKALGNTVVIVEHEKSLIQQADYILELGPGAGSLGGQICFQGTSLTGKWLSGKLSLPIPP?RRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLDIIGQQLKNFLQTIKRLISHEKQTDRLSARSIPATYIGIMTPLRQLFAETRLAKARGYTASRFSLNKRGGRCEACEGLGYIEVNMHLMPDFFMPCDICQGLRYNYETLQITWENKNIADILRLSALESFQLFPSLAPTLELMTELGLDYLQLGQPFNTLSGGEIQRLKLIADLAGKTQEKTLYILDEPSSGLHLQDIEKLVKILHKLVEKGHTVFVIEHHLDILYQADWLIELGPEGGPKGGRLIFEG?PSTPTGKVFSQFN
Pirellula_sp                         IRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSLSTYARQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARVGVPHCVACGSTISTQTPDRTKLTLMSPMVRGRKGGLVRARVDKNHTIEAIVDRRLDESTRLCGESFEELEPRTFSFNSPYGACPACQGLGKVAVRG????????????????????????????????????VTCSTCEGGRLKAESLAVTIIDAMCRMPLPDAQSWMVAAPIQSEVVRRIDFLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVGVCYVLDEPSIGLHPADHHRLLAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRHGGRLVSQGTSPTGAYLSGRSKIGLDRPRRGATLNNLQNVTAKIPLGCLVGVSGVSGSGKSSLIVDTLYPALAAKLQHIDKLVPIDQTPIGRTTRSCPATYAGVMDPIRQVYASTREAKTLGFAANRFSFNSPAGRCDVCKGNGFERIEMNFLSDLLIECSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFPKVHHLLASLVDVGLGYVTLGQSSTTLSGGEAQRIKLATELARPATGKTFYVLDEPTTGLHFADVQRLLVVLDRLVEAGNTVLVIEHQSDLLAACDWLLDLGPGGGSQGGHLIAEGPPESATGKFLRLR?
Rubrobacter_xylanophilus             ?????????????????????MLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPEVDHIDGLSPAVSIDQKTTSNNPRSTVATVTEIYDYLRLLYARAGRPHCHVCGFPVARSTPERTRFMVLAPVVRGRKGGYARVRVDRKHDIEVVVDRRLTDSIETCGASIAEIQPRTFSFNSPHGACDRCDGLGSRLEIDSVNEGAILAALSEKYGIPWRELFDGVIGNLERYMSHVPCPKCGGARLRPEALAVTVIYEFTQMSVTEAQSFFIAERVVKEIRERLGFLVDVGLGYLTLSRAAGTLSGGEAQRIRLASQVGSGLVGVLYVLDEPSIGLHQRDNRRLLNTLLRLRDLGNTLIVVEHDEETIRTADHIVDVGPGAGVHGGEIVAQGTSVTGDYLSGRRRIEPPGERRGASEHNLKGVDVEFPLGVFTCVTGVSGSGKSTLVNEILYKALANRVEQLDKVIDIDQSPIGRTPRSNPATYTKVFDHIRALFAATPEAKIRGYKPGRFSFNVKGGRCEACRGDGQIRIEMHFLPDVYVPCEVCKGRRYNAETLRVTYKGRSIADVLEMTVEEACEFFPAISRRMQTLRDVGLGYIRLGQPATTLSGGEAQRVKLASELGKRATGRTLYILDEPTTGLHFADVERLLGILHRLVDAGNTVIVIEHNLDVIRSADYIIDLGPEGGDGGGEVVAAGTPESHTGRFLRGLL
Sinorhizobium_meliloti               ISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGVPYSPATGLPIESQTGEGTRLYMLAPLVRGRKGGFQRVKVDYKHDIDVVVDRRLADSIETSGFTIPEIEPRLFSFNNPFGACTTCDGLGSQQKIDTLRDGAILEALGTVFGFRWSELFEGIVPNLERYMSAAPCPACAGYRLKPEALAVKIIGEVSEMSIRAARDWFIAVRILKEIRERLRFLNDVGLEYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLLDTLRHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGEVIAEGTSLTGKYLSGELSVAVPGERRGARANNLKNVTASIPLGVFTAVTGVSGGGKSTFLIETLYKAAARRVEHIDKVIDIDQSPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLDVHFKGKSIADVLDMTVEEGVEFFPAVRDKLVTLNQVGLGYIKIGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLHELVNQGNSVVVIEHNLEVIKTADWIIDFGPEGGDGGGEVIAQGTPESYTGQFLKELL
Synechocystis_sp                     IRIRGARQHNLKNVNLDLPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGSPHCPHCQRNIAPQTPDRTKFQILAPVVKGKKGGFVRVRINQAHTIEIVIDRRLVDSLSTHGAVMDELSPRLFSFNSPYGACPDCHGIGFVRSFCKPVYVAILYSLGQHFDFPWKKLFAGALNILQKYIINQPCHTCGGKRLKPEALAVKLINNLTSVPIRQTLERIIGELALKEIKARLQFLLDVGLDYLTLDRAAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNNRLLATLTKLRDLGNTLIVVEHDEDTIRHADYIVDIGPKAGIHGGEIVCQGDSLTGAYLSGREAIATPEERRGCCHNNLRNIDVTIPLGKLVCVTGVSGSGKSTLVNELLHPALQHYLQAIDKVIVIDQSPIGRTPRSNPATYTGIFDSIREIFTQTIEAKARGYKPGQFSFNVKGGRCEACAGQGVNVIEMNFLPDVYVQCDVCKGARYNRETLQVKYKGHSIADVLAMTTEEALTVFPRAVNRLQTLVDVGLGYIKLGQPAPTLSGGEAQRVKLASELSRRATGKTLYLIDEPTTGLSFYDVHHLLNVLQRLVDKGNSVLVIEHNLDVIRCSDWIIDLGPEGGDRGGKIMVAGTPESYTGKYLAKVL
Thermoanaerobacter_tengcongensis     IVIKGARVHNLKNIDVEIPRDKLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDYIEGLSPAISIDQKTTTKNPRSTVGTITEIYDYLRLLYARVGTPHCPICGREITMQTPEGTRIQILAPVVRGRKGGYVRVKIDKKHTIEVVVDRRLTDSIETCNVSIEELSPRMFSFNSPYGACPVCMGLGEFMKVDSLATGVFMLRVIEYFGYPYEEFFEGIINNLERYMRPVTCPACNGARLKPEALAVTVIKEMTDLTIGELLKFIIARPILKEIKARLNFLVDVGLDYLTLSRPASTLSGGEAQRIRLASQIGSGLVGVTYILDEPSIGLHQRDNQRLINSLKRLRDQGNTVIVVEHDEETIYAADYIIDIGPGAGEHGGEVVVAGTSLTGQYLSGKIKIEVPEKRRGAKENNLKNIDVEFPLGVFICVTGVSGSGKSTLVNEILYKALAQKIEHIDKVINIDQSPIGRTPRSNPATYTGVFDYIREVFANTPEARMRGYKPGRFSFNVKGGRCEACGGDGIIKIEMNFLPDVYVPCEVCKGKRYNRETLEVKYKGKSIADVLDMTVEEALELFPRIKNKLMTLYEVGLGYIKLGQPSTQLSGGEAQRVKLATELSKRPTGRTLYILDEPTTGLHFADIHRLLNVLNKLTDAGNTVIVIEHNLDVIKSADYIIDLGPEGGDRGGMVIATGTPESYTGWFLRKVL
Thermobifida_fusca                   LVIRGAREHNLKNVSLELPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPAVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLWARIGKPHCPRCGRQIAPQTPEGTRFQVLAPVVRGRKGGFTRARVDETHDIAVVVDRRLADSVETDDLSFEELEPRSFSFNSPYGACPECTGLGTRLEVDTLAEGAIMQALGEAMGFPWEKLFEGVVNWIRRYMRVVPCPACQGSRLKPEALAVTVIAEVSAMPLGECADFFIAAQVLKEINARLGFLLDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNFRLLETLQRLRDLGNTLIVVEHDEDTIRVADWVVDIGPGAGEHGGQVVVSGTSITGQYLSGRRTIPVPEKRRGARENNLRDIDVAFPLGVFTAVTGVSGSGKSTLVNEILYKALAKELHLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFAQTTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMQFLPDVYVPCEVCHGARYNRETLDVHYKGKNIADVLDMPITEALEFFSAIRRHLQTLHDVGLGYVRLGQPATTLSGGEAQRVKLATELQRRSTGRTVYILDEPTTGLHFADIEKLLNVLGRLVDAGNTVIVIEHNLDVIKTADYLIDMGPEGGSRGGTVVVTGTPESHTGHFLRAIL
Thermotoga_maritima                  IVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTYARQFLGNLKKPDVDEIEGLSPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKAHCPECGRPLEKKSKEGSRIYILAPVATEKKGGFARIEIDKRHTVKLVVDRRILDSLELCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDSVLEGAIVAREIEKRGVPFKDLFEGVVPKVQRFIVQRTCSVCGGRRLNREALSVKIIHEFTELSISEELEFLIVGELLKEIEKRLEFLVDVGLEYLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDLGNTVIVVEHDEEVIRNADHIIDIGPGGGTNGGRVVFQGTSLTGEYLSGKRKITVNKTRRGVRHNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYPALMNLLENIDKMIAIDQSPIGRTPRSNPATYTKVFDEIRSLFAMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRETLEITYKGKNISDILDMTVDEALEFFPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVIKNADHIIDLGPEGGKEGGYIVATGTPESYTGRFLKNVL
Treponema_denticola                  LIVKGAREHNLKNIDVELPRDKLIVISGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGRMDKPDVDYIEGLSPAISIEQKTTHRNPRSTVGTVTEIYDYYRLLFARTGHAHCPSCGKEIKEQTPEGTRVQILAPIIKGKKGGFVRARIDKKHTIEIIVDRRLSESVETCGISMPELQPRLFSFNNPIGACPECTGLGMTQHFDSFNEGVFFEALAAQFDFPLNKLWPGIMADMNRFMSIKPCKTCGGMRLKPEVLAVTVIHDLTCLSVGDSIEFFIAFQILKEIKARLEFMKNVGLDYLTLERKAATLSGGEAQRIRLATQIGSSLIGVLYILDEPSIGLHQRDNQRLIDTLLYLRNLGNTLIVVEHDEQTLRTADYIVDLGPGAGVHGGNITAQGTSLTGQYLAGTLKMDIPKERRGVSEHNLKDVSIKIPLGAFTCITGVSGSGKSTLLTDVLYPAVSNKIEHIDKVINIDQSPIGRTPRSNPATYVGVFTGIRDLFASLPESKARGYKPGRFSFNVRGGRCEHCQGDGTLTIEMNFLPDVYIACDVCRGKRFNKETLDVRYKGKNIADVLDMTIEEASEFFPHIARKLQTLLSVGLGYIKLGQSALTLSGGEAQRVKLANELAKRSTGKTLYILDEPTTGLHFADVKQLMQVIHRLIDQGNTVIMIEHNLDVILQADKIIDLGPEGGTNGGQIIAEGTPESYTGYYIKEML
Zymomonas_mobilis                    ISIRGAREHNLKNVSIDIPRNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLWARVGIPYSPATGLPITAQTPEGSRLHLLAPVVRGRKGGFSRLRIDRKHDIEVVVDRRSAQSLETSGFTIPEIEPRLFSFNAPQGACPACDGLGEKPYFDSLAKGALLSSLARYYDFPWKKLFEGVIRNLERYQSAAPCEVCHGARLRPEALAVLIISDVTKMTVKPALEFFIAERILKEIIERLGFLDNVGLDYLSLDRSSGTLSGGESQRIRLASQIGSGLSGVLYVSDEPSIGLHQRDNDRLLETLKRLRDLGNSVLVVEHDEDAIRLADYVVDMGPGAGVMGGKVIAAGSSLTGAYLSGRREIAVPDKRRGATANNLQNVTASIPLVTFTCVTGVSGSGKSSLILDTLYTAAARELEHLDKVIDIDQSPIGRTPRSNPATYTGAFTAIREWFAKLPEAQARGYKAGRFSFNVKGGRCEACQGDGVKKIEMHFLPDVYVTCDVCHGARYNRETQEVKFKGQSIADVLNMTVDQAAEFFPSIRDKMAMLARVGLGYIKVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLNALVDQGNSIVVIEHNLDVIKTADWLIDLGPEGGTGGGQIIAAGTPESYTGHYLKRML
;
END;

[ The following blocks are output data for analysis step 2807 ]
BEGIN TREES;
      TITLE Tb7581;
      LINK TAXA = TaxaForAnalysisStep2807;
      TREE UVR_mbpostcons = [&R] (Synechocystis_sp,((Pirellula_sp,((Leptospira_interrogans,(Treponema_denticola,(Geobacter_sulfurreducens,((Zymomonas_mobilis,Sinorhizobium_meliloti),(Magnetococcus_sp,((Burkholderia_fungorum,Chromobacterium_violaceum),(Escherichia_coli,Coxiella_burnetii))))))),(((Campylobacter_jejuni,Helicobacter_hepaticus),((((Bacteroides_thetaiotaomicron,Chlorobium_tepidum),Bdellovibrio_bacteriovorus),(Chlamydophila_caviae,Parachlamydia_sp)),(Aquifex_aeolicus,Thermotoga_maritima))),(((Thermoanaerobacter_tengcongensis,Clostridium_botulinum),(Rubrobacter_xylanophilus,(Bifidobacterium_longum,Thermobifida_fusca))),(Fusobacterium_nucleatum,(Lactococcus_lactis,Bacillus_subtilis)))))),Gloeobacter_violaceus));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2323]


END;