#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 05, 2024; 23:01 GMT TreeBASE (cc) 1994-2008 Study reference: Janse van rensburg J., Lamprecht S., Groenewald J.Z., Castlebury L., & Crous P.W. 2006. Characterisation of Phomopsis spp. associated with die-back of rooibos (Aspalathus linearis) in South Africa. Studies in Mycology, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1561] [ The following blocks are input data for analysis step 3038 ] BEGIN TAXA; TITLE TaxaForAnalysisStep3038; DIMENSIONS NTAX=78; TAXLABELS 'Cylindrocladiella peruviana AY793459 / AY725736' Diaporthe_ambigua_AF230767 Diaporthe_ambigua_AF230768 Diaporthe_ambigua_AJ458389 Diaporthe_ambigua_CBS_117167 Diaporthe_ambigua_CBS_117170 Diaporthe_ambigua_CBS_117371 Diaporthe_ambigua_CBS_117372 Diaporthe_ambigua_CBS_117373 Diaporthe_ambigua_CBS_117374 Diaporthe_ambigua_CPC_5409 Diaporthe_ambigua_CPC_5412 Diaporthe_ambigua_CPC_5413 Diaporthe_ambigua_CPC_5419 Diaporthe_ambigua_CPC_5423 Diaporthe_ambigua_CPC_5425 Diaporthe_aspalanthi_AF000564 Diaporthe_aspalanthi_AF000566 Diaporthe_aspalanthi_AF001015 Diaporthe_aspalanthi_AF001016 Diaporthe_aspalanthi_CBS_117168 Diaporthe_aspalanthi_CBS_117169 Diaporthe_aspalanthi_CBS_117500 Diaporthe_aspalanthi_CPC_5410 Diaporthe_aspalanthi_CPC_5430 Diaporthe_caulivola_AF000563 Diaporthe_caulivola_AF000567 Diaporthe_helianthi_AJ312354 Diaporthe_helianthi_AJ312358 Diaporthe_helianthi_AJ312363 Diaporthe_helianthi_AJ312364 Diaporthe_helianthi_AY705842 Diaporthe_perjuncta_AF230760 Diaporthe_perjuncta_AF230765 Diaporthe_phaseolorum Diaporthe_phaseolus_var._caulivora Eutypella_leprosa Eutypella_vitis Libertella_sp._CBS_117163 Libertella_sp._CBS_117164 Libertella_sp._R686I Libertella_sp._R699H Phomopsis_amygdali_AF102997 Phomopsis_amygdali_AF230755 Phomopsis_columnaris Phomopsis_cuppatea_CBS_117499 Phomopsis_cuppatea_CPC_5416 Phomopsis_cuppatea_R164AN Phomopsis_longicolla_AF000207 Phomopsis_longicolla_AF000211 Phomopsis_longicolla_U97658 Phomopsis_magnoliae Phomopsis_quercina Phomopsis_sclerotioides Phomopsis_sp._3 Phomopsis_sp._4 Phomopsis_sp._5 Phomopsis_sp._6_AY485732 Phomopsis_sp._6_AY485734 Phomopsis_sp._7 Phomopsis_sp._8 Phomopsis_sp._9_AJ312348 Phomopsis_sp._9_AJ312366 Phomopsis_sp._9_CBS_117165 Phomopsis_theicola_AF230759 Phomopsis_theicola_AF230762 Phomopsis_theicola_AY485724 Phomopsis_theicola_CBS_117166 Phomopsis_theicola_CBS_117501 Phomopsis_theicola_CBS_187.27 Phomopsis_theicola_CPC_5424 Phomopsis_vaccinii_AF317557 Phomopsis_vaccinii_AF317563 Phomopsis_viticola_AF230751 Phomopsis_viticola_AF230763 Phomopsis_viticola_AY485757 Phomopsis_viticola_AY485765 Phomopsis_viticola_AY485775 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1205] TITLE Combined; LINK TAXA = TaxaForAnalysisStep3038; DIMENSIONS NCHAR=1107; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Cylindrocladiella peruviana AY793459 / AY725736' -------------AGGGATCATTACAGAGT---TT--ACA-----ACTC---CC--AAACCC-CTGTGAACTTACCATG-TC---GTTGCCTCGGCG--GTGTC-------TT---GCTTC--------GGCGAG---CC-CGCCA----GAGGAC-CC-----------------AACAAACTCTTG-TTTTTTTAGTATTAT--CTGAGTG---ACAAGTTTAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAACCCCC-GGGTTTGGTGTTGGAGATCGACATGAAGCCCTTCTGGGTGTGAAGTCGTCTCCCAAATATAGTGGC-GGTCTCGCTGTAGCTTCCTATGC-GT-AGTAGCACACCTCGCA-CTGGAA-----AGC--AGCAAGCCCACGCCGTTAAACCCCCCACTTTCT-G--AGTTTGACCTCGAATCAGGTAGGATTA-----???-----CATCGAGAAGTTCGAGAAGGTTGGTGACATTTCCTCGATTTTATCTATTGCGCCCATCGATTCCCACATCGCGCCTACACTCGAAGCGCACACCCCTCACTTCCCCC-TCCATCTCGATCGAAAATTTTTTTACCCACAAACTCTGGTGTGTGGTGGGGCAATTACCCCGCCGCGCACAGGACGTTGCAAAATTAGCCCCCCCACTACTGCACATCACTCACATCTGATCAACTTGTCTTACATCTTAC-TGACCCATCATTCTATAGGAAGCT-GCCGAGCTCGGCAAGGGTTCTTTCAAGTATGCCTGGGTTCTTGACAAGCTGAAGGCCGAGCGTGAGCGTGGTATCACCATCG-ATATCGCCCTCTGGAAGTTCGAGACTCCTCGCTACTTCGTCACCGTCATTGGTATGTTTCATCTCAATGTCATCTCATGATATCCTTTTACTAACTATTTCATCACAGACGCTCCCGGTCACCGTGACTTTCATC Diaporthe_ambigua_AF230767 ---------------------------------------------------------AACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC--AG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_ambigua_AF230768 ---------------------------------------------------------AACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC--AG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_ambigua_AJ458389 --------------------------------------------GGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_ambigua_CBS_117167 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TTCAAA- Diaporthe_ambigua_CBS_117170 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTCTTTCAAA- Diaporthe_ambigua_CBS_117371 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCTACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TT----- Diaporthe_ambigua_CBS_117372 -------------------------------------CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CCCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTCTTTCAAA- Diaporthe_ambigua_CBS_117373 -----------------------GCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TTCAAA- Diaporthe_ambigua_CBS_117374 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCTACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TT----- Diaporthe_ambigua_CPC_5409 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCTACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TTCAAA- Diaporthe_ambigua_CPC_5412 -------------------CATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAG---------------ACCCCCA--TCG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TTCAAA- Diaporthe_ambigua_CPC_5413 -------------------CATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAC---------------ACCCCCA--TTG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TT----- Diaporthe_ambigua_CPC_5419 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAG---------------ACCCCCA--TCG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCCCGCCGAGCTGGGTAAG------------- Diaporthe_ambigua_CPC_5423 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAG---------------ACCCCCA--TCG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TT----- Diaporthe_ambigua_CPC_5425 ----------------------TGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TCGTTGCCTCGGCGA-AGGCC-------GG--CCTCCCC--ACCGAGGCCCCTT-GG-GAAC-----AAGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCT-TAGTGAATCT-CTGAGTAAAAAAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------CC-GAG-AGGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CCGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CGAATGCCTACGG-C-ATAG---------------ACCCCCA--TCG-CCT-TTCATAT-GCACTTCAG-AATCA-----CTTGTGCGCGGCCGTTTGCGCGGCTTCGCCACACCCTT---CAAG-----GCATTTTTCACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGT--GCTTAT----CAGGCGGCTTATCTCTTACACTCACAAACCCCTTGTT-GCATCAACCCACTCG-GTGCTGCTGTTATCACCGACATCATCCCCTCCA--ACTCAT--CAGCCTCTTCCCT-GC-AAACAAA---------------------CTGATGAATTGCCGTG-----GAACATCAT-GCT-GACCTCTTTTCCCACACA-GCC-GCCGAGCTGGGTAAGGGTTT-TTCAAA- Diaporthe_aspalanthi_AF000564 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---AGGGGGCCCCTC-GG-ATAC-----TATGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_aspalanthi_AF000566 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---AGGGGGCCCCTC-GG-ATAC-----TATGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_aspalanthi_AF001015 -------------AGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---AGGGGGCCCCTC-GG-ATAC-----TATGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_aspalanthi_AF001016 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---AGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_aspalanthi_CBS_117168 ---------------GGATCATTGCTGGGACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCC----AGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT-ACAAACCACCTTACAC-ATGC---------------TTCTCC---CCGTCAT-CCCAGTC--CACCACGAGACCCC------TTGCGTGCAGCCGTTTGCGCCGCGTCGCCACACCAGG------G-CC--GCATTTT-CACCC--CTCGC-TCTGG--ATTTT--CCATTTTCAG--TGCGAGTGCGGGG----TGC--GCTTAT----CGGAGTGCTTATCTCCGCC--TGTAAAACCC--TGTT-ACATCA--CCCCTCCCA--AC-CACCACTC--CGCCTCTTT-------ATCACACATG-CTGTCCCCCCTGCATCTAAACAACGA-------------------CGGTACTCTTTCT--------GAGAACGAT-GCT-GACTTTTCATTTC-TACA-GCC-GCTGAGCTCGGTAAGGGTTC-TTCAAA- Diaporthe_aspalanthi_CBS_117169 -------------------------------------CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCC----AGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT-ACAAACCACCTTACAC-ATGC---------------TTCTCC---CCGTCAT-CCCAGTC--CACCACGAGACCCC------TTGCGTGCAGCCGTTTGCGCCGCGTCGCCACACCAGG------G-CC--GCATTTT-CACCC--CTCGC-TCTGG--ATTTT--CCATTTTCAG--TGCGAGTGCGGGG----TGC--GCTTAT----CGGAGTGCTTATCTCCGCC--TGTAAAACCC--TGTT-ACATCA--CCCCTCCCA--AC-CACCACTC--CGCCTCTTT-------ATCACACATG-CTGTCCCCCCTGCATCTAAACAACGA-------------------CGGTACTCTTTCT--------GAGAACGAT-GCT-GACTTTTCATTTC-TACA-GCC-GCTGAGCTCGGTAAGGGTTC-TTCAAA- Diaporthe_aspalanthi_CBS_117500 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCC----AGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CAAACCACCTTACAC-ATGC---------------TTCTCC---CCGTCAT-CCCAGTC--CACCACGAGACCCC------TTGCGTGCAGCCGTTTGCGCCGCGTCGCCACACCAGG------G-CC--GCATTTT-CACCC--CTCGC-TCTGG--ATTTT--CCATTTTCAG--TGCGAGTGCGGGG----TGC--GCTTAT----CGGAGTGCTTATCTCCGCC--TGTAAAACCC--TGTT-ACATCA--CCCCTCCCA--AC-CACCACTC--CGCCTCTTT-------ATCACACATG-CTGTCCCCCCTGCATCTAAACAACGA-------------------CGGTACTCTTTCT--------GAGAACGAT-GCT-GACTTTTCATTTC-TACA-GCC-GCTGAGCTCGGTAAGGGTTCTTTCAAA- Diaporthe_aspalanthi_CPC_5410 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCC----AGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CAAACCACCTTACAC-ATGC---------------TTCTCC---CCGTCAT-CCCAGTC--CACCACGAGACCCC------TTGCGTGCAGCCGTTTGCGCCGCGTCGCCACACCAGG------G-CC--GCATTTT-CACCC--CTCGC-TCTGG--ATTTT--CCATTTTCAG--TGCGAGTGCGGGG----TGC--GCTTAT----CGGAGTGCTTATCTCCGCC--TGTAAAACCC--TGTT-ACATCA--CCCCTCCCA--AC-CACCACTC--CGCCTCTTT-------ATCACACATG-CTGTCCCCCCTGCATCTAAACAACGA-------------------CGGTACTCTTTCT--------GAGAACGAT-GCT-GACTTTTCATTTC-TACA-GCC-GCTGAGCTCGGTAAGGGTTCTTTCAAA- Diaporthe_aspalanthi_CPC_5430 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCC----AGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGCCAACTCTTG-TTTTTACACCGAAACT-CTGAGCAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAGA-AGGG---CAGGCCCTGAAATCTAGTGGC-GGGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACAT--CAAACCACCTTACAC-ATGC---------------TTCTCC---CCGTCAT-CCCAGTC--CACCACGAGACCCC------TTGCGTGCAGCCGTTTGCGCCGCGTCGCCACACCAGG------G-CC--GCATTTT-CACCC--CTCGC-TCTGG--ATTTT--CCATTTTCAG--TGCGAGTGCGGGG----TGC--GCTTAT----CGGAGTGCTTATCTCCGCC--TGTAAAACCC--TGTT-ACATCA--CCCCTCCCA--AC-CACCACTC--CGCCTCTTT-------ATCACACATG-CTGTCCCCCCTGCATCTAAACAACGA-------------------CGGTACTCTTTCT--------GAGAACGAT-GCT-GACTTTTCATTTC-TACA-GCC-GCTGAGCTCGGTAAGGGTTCTTTCAAA- Diaporthe_caulivola_AF000563 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCT----TGGGGGCCCCCC-GG-AGAC-----GGGGAG-CAG-CCCGCCGGCGG-CCAAGCTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAA--TAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATTCATCGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_caulivola_AF000567 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCT----TGGGGGCCCCCC-GG-AGAC-----GGGGAG-CAG-CCCGCCGGCGG-CCAAGCTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAA--TAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATTCATTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_helianthi_AJ312354 ---------------GGATCATTGCTGGAACGCGC--CCC---CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--ATCTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---TGGGGGCCCCCT-GG-GAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCGACCAAACTCTTG-TTTCTACAGTGGATCT-CTGAGTTA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-------GTGAC-AGGG---CAGGCCCTGAAATCCAGCGGC-GAGCCCGCCGGGACCCCGAGCGTAGT-AGTAACTT-CTCG-CT-CCGGAA----GGCCCTGGCGGCGCCCTGCCGTTAAACCCCCAACTC-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_helianthi_AJ312358 ---------------GGATCATTGCTGGAACGCGC--CCC---CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--ATCTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---TGGGGGCCCCCT-GG-GAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCGACCAAACTCTTG-TTTCTACAGTGGATCT-CTGAGTTA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-------GTGAC-AGGG---CAGGCCCTGAAATCCAGCGGC-GAGCCCGCCGGGACCCCGAGCGTAGT-AGTAACTT-CTCG-CT-CCGGAA----GGCCCTGGCGGCGCCCTGCCGTTAAACCCCCAACTC-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_helianthi_AJ312363 ---------------GGATCATTGCTGGAACGCGC--CC----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--ATCTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--TGGGGGGCCCCCT-GG-GAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCGACCAAACTCTTG-TTTCTACAGTGGATCT-CTGAGTAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-------GTGAC-AGGG---CAGGCCCTGAAATCCAGCGGC-GAGCCCGCCGGGACCCCGAGCGTAGT-AGTAACTT-CTCG-CT-CCGGAA----GGCCCTGGCGGCGCCCTGCCGTTAAACCCCCAACTC-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_helianthi_AJ312364 ---------------GGATCATTGCTGGAACGCGC--CCC---CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--ATCTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--TTGGGGGCCCCCT-GG-GAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCGACCAAACTCTTG-TTTCTACAGTGGATCT-CTGAGTAAA-AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-------GTGAC-AGGG---CAGGCCCTGAAATCCAGCGGC-GAGCCCGCCGGGACCCCGAGCGTAGT-AGTTACTT-CTCG-CT-CCGGAA----GGCCCTGGCGGCGCCCTGCCGTTAAACCCCCAACTC-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_helianthi_AY705842 ------------------------CTGGAACGCGC--CCC---CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--ATCTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC---TGGGGGCCCCCT-GG-GAAC----AGGGGAG-CAG-CCCGCCGGCG--CCGACCAAACTCTTG-TTTCTACAGTGGATCT-CTGAGTTA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-------G-GAC-AGGG---CAGGCCCTGAAATCCAGCGGC-GAGCCCGCCGGGACCCCGAGCGTAGT-AGTAACTT-CTCG-CT-CCGGAA----GGCCCTGGCGGCGCCCTGCCGTTAAACCCCCAACTC-CT-GAAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_perjuncta_AF230760 ---------------------------------------------------------AACCCTTTGTGAACTTATACCTATA-CTGTTGCCTCGGCGTCAGGCT-------GG--CCCCCC--TCGGGGGGTCCCTC-AC-CATCTCGGTGAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACAAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-T--C-GGTAAGAAGG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CTGGAA----GGTCTTGGTGCGGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_perjuncta_AF230765 ---------------------------------------------------------AACCCTTTGTGAACTTATACCTATA-CTGTTGCCTCGGCGTCAGGCT-------GG--CTCCCC--TCGGGGGGTCCCTC-AC-CATCTCGGTGAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACAAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGA-CACTGCCT-T--T-GAG-AAAAGG----CAGGTCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGTCTTGGTGCGGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diaporthe_phaseolorum -------------AGGGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-TTGTTGCCTCGGCGT-AGGCC-------GG--CCTCTTC--ACTGAGGCCCCCT-GG-AAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCTACAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCA?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT------TCGTCC-AGAA-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGG-------------------???-----CATCGAGAAGTTCGAGAAGGAAGGTTAGT-------------------AAACAT-CG-CCC-AAC--GG-G-CACC---------------TTGACCTCC-ACATCACCCCATAC-GCACAGAACTCG--------TTGGCGCGCGCT-GCCTGCGAGGCTTCGTCACACCTGT---CAAG-----GCATTTT-CACCC--CTCCC-TCTGG--ATTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGCCGCTTATCTCTCACA--CCAAAACCC--TGTC-GCACCT--TACCTCT-CTTCCACCAGTGA---CGCAC----CAACAGTATCACCTT---CATTCCCATCTGTTGCTCGTGGGAGC-------------------TTTTCGACTTGCTT-------GAAAATGAT-GCT-GACTCTTT-CTGA--ACA-GCC-GCCGAGCTGGGTAAGGGTTCCTTCAA-- Diaporthe_phaseolus_var._caulivora -------------AGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCT----TGGGGGCCCCCC-GG-AGAC-----GGGGAG-CAG-CCCGCCGGCGG-CCAAGCTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAA--TAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATTCATTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Eutypella_leprosa ---------------GGATCATT-----AAAGAGTAGTTTTTACAAC-AACTCC--AAACCC-ATGTGAACT--TACCT--A--TGTTGCCTCGGCGG-GGAAGCCTACCCTGTACCTACCC-TGT---AGTTACCC----TGT-------AGG--TCTA-CCCGCCAGAGGACTTC-TAAACTCT-G-TTTTT-ATATGAAACTTCTGAGTGTTTA-AAC-TTAAT-AGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGG-CATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCTATTTGCTTGGCGTTGGGAGCTTACCCTGC--ACTTG----CGGG-A-CAACTCCTTAAATATATTGGC-GGAGTCGCGAAGACCCCAAGCGTAGT-AATTTTTTTCTCG-CTTTAGGTGT--CGACGCTGGC---ATCCAGCCACTAAACCCCCAATTT-TG-T-AGGTTTGACCTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Eutypella_vitis ---------------GGATCATT-----AAAGAGTAGTTTTTACAAC-AACTCC--AAACCC-ATGTGAACT--TACCT--A--TGTTGCCTCGGCGG-GGAAA-CTACCCGGTAGCTACCC-TGT---AGCTACCC----TGTA------AGG--AATA-CTCGTCGACGGACCAT-TAAACTCT-G-TTTTT-CTATGAAACTTCTGAGTGTTTT-AAC-TTAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGG-CATGCCTGTTCGAGCGTCATTTCGACCATCAAGCCCTATTTGCTTGGCGTTGGGAGCTTACCCTGC--AGTTG----CGGG-A-TAACTCCTCAAATATATTGGC-GGAGTCGCGGAGACCCTAAGCGTAGT-AATTCTT--CTCG-CTTTAGTAGTGTTAACGCTGGC---ATCTGGCCACTAAACCCCTAATTTTTA-T-AGGTTTGACCTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Libertella_sp._CBS_117163 -----------------------------------------TACAAC-AACTCC--AAACCC-ATGTGAACT--TACCT--A--TGTTGCCTCGGCGG-GGGAA-----------CCTACCC-GGT---ACTTACCC----TGT-------AGG---CGA-CCCGCCGATGGACCAT-CAAACTCT-G-TTT--ATTATGTAACTTCTGAGTGTTTA-AAC-TTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGG-CATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCTATTTGCTTGGCGTTGGGAGCTTAACCT----ACCCTGT--AGG--A-TAACTCCTCAAATATATTGGC-GGAGTCGCGAAGACCCCAAGCGTAGT-AATTTTTT-CTCG-CTTCAGGTGTGTCGGCGCTGGC---ATTCAGCCACTAAACCCCTAGTTT-TT-T-AGTCTTGACCTCGGATCAGGTAGGAATA-----???------------------------------CAGT------------------CGAATCT-ACTATCTCAGCACTCCTACATTAAT-----------ATCCAAATCACACACT--CCTT---G-ACCACGACACCCA-----ACTG----CAAATGTCAACA---CGTTGC-AGAGGGCTCT-CAAGAACCCGCGGTT--CACGTGGCTGCCATCTGCAAATTTT---CA----CAC--TGCCACTTATCTGCTGATAA--GCCCCT----CCC-CCGCCTATC-AATTC--TGCCCCTCAC--ATCT-GCACT---TTTTTCT-----GGGAAAAGTGG--ATCCATTTATTGA--ACCACCCATG-CTGT-CGCTCTGCTGCG---CAA----------------------CGTTAT---------------GAAGATGATTACT-GACCCATTCTATA-GGAA-GCC-GCTGAGCTTGGTAAGGGTTC-TTCAAA- Libertella_sp._CBS_117164 ---------------GGATCATT-------AGAGTAGTTATTACAAC-AACTCC--AAACCC-ATGTGAACT--TACCT--A--TGTTGCCTCGGCGG-GGGAA-----------CCTACCC-GGT---ACTTACCC----TGT-------AGG---CGA-CCCGCCGATGGACCAT-CAAACTCT-G-TTT--ATTATGTAACTTCTGAGTGTTTA-AAC-TTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGG-CATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCTATTTGCTTGGCGTTGGGAGCTTAACCT----ACCCTGT--AGG--A-TAACTCCTCAAATATATTGGC-GGAGTCGCGAAGACCCCAAGCGTAGT-AATTTTTT-CTCG-CTTCAGGTGTGTCGGCGCTGGC---ATCCAGCCACTAAACCCCTAATTT-TT-T-AGTCTTGACCTCGGATCAGGTAGGAATA-----???------------------------------CAGT------------------CGAATCT-ACTATCTCAGCACTCCTACATTAAT-----------ATCCAAATCACACACT--CCTT---G-ACCACGACACCCA-----ACTG----CAAATGTCAACA---CGTTGC-AGAGGGCTCT-CAAGAACCCGCGGTT--CACGTGGCTGCCATCTGCAAATTTT---CA----CAC--TGCCACTTATCTGCTGATAA--GCCCCT----CCC-CCGCCTATC-AATTC--TGCCCCTCAC--ATCT-GCACT---TTTTTCT-----GGGAAAAGTGG--ATCCATTTATTGA--ACCACCCATG-CTGT-CGCTCTGCTGCG---CAA----------------------CGTTAT---------------GAAGATGATTACT-GACCCATTCTATA-GGAA-GCC-GCTGAGCTTGGTAAGGGTTC-TTCAAA- Libertella_sp._R686I ---------------GGATCATT-----AAAGAGTAGTTATTACAAC-AACTCC--AAACCC-ATGTGAACT--TACCT--A--TGTTGCCTCGGCGG-GGGAA-----------CCTACCC-GGT---ACTTACCC----TGT-------AGG---CGA-CCCGCCGATGGACCAT-CAAACTCT-G-TTT--ATTATGTAACTTCTGAGTGTTTA-AAC-TTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGG-CATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCTATTTGCTTGGCGTTGGGAGCTTAACCT----ACCCTGT--AGG--A-TAACTCCTCAAATATATTGGC-GGAGTCGCGAAGACCCCAAGCGTAGT-AATTTTTT-CTCG-CTTCAGGTGTGTCGGCGCTGGC---ATTCAGCCACTAAACCCCTAATTT-TT-T-AGTCTTGACCTCGGATCAGGTAGGAATA-----???------------------------------CAGT------------------CGAATCT-ACTATCTCAGCACTCCTACATTGAT-----------ATCCAAATCACACACT--CCTT---G-ACCACGACACCCA-----ACTG----CAAATGTCAACA---CGTTGC-AGAGGGCTCT-CAAGAACCCGCGGTT--CACGTGGCTGCCATCTGCAAATTTT---CA----CAC--TGCCACTTATCTGCTGATAA--GCCCCT----CCC-CCGCCTATC-AATTC--TGCCCCTCAC--ATCT-GCACT---TTTTTCT-----GGGAAAAGTGG--ATCCATTTATTGA--ACCACCCATG-CTGT-CGCTCTGCTGCG---CAA----------------------CGTTAT---------------GAAGATGATTACT-GACCCATTCTATA-GGAA-GCC-GCTGAGCTTGGTAAGGGTTC-TTCAAA- Libertella_sp._R699H -----------------------------------------TACAAC-AACTCC--AAACCC-ATGTGAACT--TACCT--A--TGTTGCCTCGGCGG-GGGAA-----------CCTACCC-GGT---ACTTACCC----TGT-------AGG---CGA-CCCGCCGATGGACCAT-CAAACTCT-G-TTT--ATTATGTAACTTCTGAGTGTTTA-AAC-TTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGG-CATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCTATTTGCTTGGCGTTGGGAGCTTAACCT----ACCCTGT--AGG--A-TAACTCCTCAAATATATTGGC-GGAGTCGCGAAGACCCCAAGCGTAGT-AATTTTTT-CTCG-CTTCAGGTGTGTCGGCGCTGGC---ATTCAGCCACTAAACCCCTAATTT-TT-T-AGTCTTGACCTCGGATCAGGTAGGAATA-----???------------------------------CAGT------------------CGAATCT-ACTATCTCAGCACTCCTACATTAAT-----------ATCCAAATCACACACT--CCTT---G-ACCACGACACCCA-----ACTG----CAAATGTCAACA---CGTTGC-AGAGGGCTCT-CAAGAACCCGCGGTT--CACGTGGCTGCCATCTGCAAATTTT---CA----CAC--TGCCACTTATCTGCTGATAA--GCCCCT----CCC-CCGCCTATC-AATTC--TGCCCCTCAC--ATCT-GCACT---TTTTTCT-----GGGAAAAGTGG--ATCCATTTATTGA--ACCACCCATG-CTGT-CGCTCTGCTGCG---CAA----------------------CGTTAT---------------GAAGATGATTACT-GACCCATTCTATA-GGAA-GCC-GCTGAGCTTGGTAAGGGTTC-TTCAAA- Phomopsis_amygdali_AF102997 ---------------GGATCATTGCTGGAACGCGC--CT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CTCCCA--TCTGGGGGCCCCTCGTTTCTGAC----GAGGAG-CAGGCTCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTAATTTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-T--TGTGTAAAAGCGAAGGCAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACTCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGAC-TGGCGGTGCCCTGCCGTTAAACCCCCAACTC-TT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_amygdali_AF230755 ---------------------------------------------------------AACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CTCCCA--TCTGGGGGCCCCTCGTTTCTGAC----GAGGAG-CAGGCTCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTAATTTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-T--TGTGTAAAAGCGAAGGCAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACTCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGAC-TGGCGGTGCCCTGCCGTTAAACCCCCAACTC-TT-GAAAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_columnaris -------------AGGGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTCACT-----GAGGCCCCTC-GG-AAAC-----GAGGAG-CAG-CCCGCCGGCGG-CCAACCAGACTCTTG-TTTC-TTAGTGGATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCA----CTGCTTGGTGTTGGGG-CACCGCC-------TGTAAA-AGGG---CGGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AATTATAT-TTCG-TT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_cuppatea_CBS_117499 ---------------GGATCATTGCTGGAACGCGC--TT----TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCC--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTTTGTTGCAAAAGGCCCCCT-GG-AAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----CGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTCATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACATCACACAT-CCCACAG-C-ATGA---------------A-CTCCACAAAGTCC--TCCATGC-GCACATTGC-CATCA-----TAGGTGCGCGACTGTCTGCGCGGCTTCGTCACACCCGT---CAAG-C----CATTTT-CACCC--CTCCC-TCTGGGTTTTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGCCGCTTATCTCCTACA-CGCAAAACCC--TGCTGGCAATAA-CCACTCC-TTCCCGTCGCCAACACCAACTCTACCACTATGAAC-CCTAT--CAAAAACCCTCCTGGCGAAACGAA---------------------CTG-TCAA-------------GAATATGAC-GCT-GACTCACT-TTCCACACA-GCC-GCCGAGCTGGGTAAGGGTTCCTTCAAA- Phomopsis_cuppatea_CPC_5416 ---------------GGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCC--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTTTGTTGCAAAAGGCCCCCT-GG-AAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----CGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTCATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACATCACACAT-CCCACAG-C-ATGA---------------A-CTCCACAAAGTCC--TCCATGC-GCACATTGC-CATCA-----TAGGTGCGCGACTGTCTGCGCGGCTTCGTCACACCCGT---CAAG-C----CATTTT-CACCC--CTCCC-TCTGGGTTTTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGCCGCTTATCTCCTACA-CGCAAAACCC--TGCTGGCAATAA-CCACTCC-TTCCCGTCGCCAACACCAACTCTACCACTATGAAC-CCTAT--CAAAAACCCTCCTGGCGAAACGAA---------------------CTG-TCAA-------------GAATATGAC-GCT-GACTCACT-TTCCACACA-GCC-GCCGAGCTGGGTAAGGGTTCCTTCAAA- Phomopsis_cuppatea_R164AN ------------------------------CGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCC--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTTTGTTGCAAAAGGCCCCCT-GG-AAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----CGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTCATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAACATCACACAT-CCCACAG-C-ATGA---------------A-CTCCACAAAGTCC--TCCATGC-GCACATTGC-CATCA-----TAGGTGCGCGACTGTCTGCGCGGCTTCGTCACACCCGT---CAAG-C----CATTTT-CACCC--CTCCC-TCTGGGTTTTTT--CCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGCCGCTTATCTCCTACA-CGCAAAACCC--TGCTGGCAATAA-CCACTCC-TTCCCGTCGCCAACACCAACTCTACCACTATGAAC-CCTAT--CAAAAACCCTCCTGGCGAAACGAA---------------------CTG-TCAA-------------GAATATGAC-GCT-GACTCACT-TTCCACACA-GCC-GCCGAGCTGGGTAAGGGTTCCTTCAA-- Phomopsis_longicolla_AF000207 ---------------GGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTTTTGTGACAAAGGCCCCCT-GG-AGAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCTACAGTGAATCT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTC------TCTGAC--GGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCTAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-TT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_longicolla_AF000211 ---------------GGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTTTTGTGACAAAGGCCCCCT-GG-AGAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCTACAGTGAATCT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTC------TCTGAC--GGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCTAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-TT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_longicolla_U97658 ---------------GGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTTTTGTGACAAAGGCCCCCT-GG-AGAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACCAAACTCTTG-TTTCTACAGTGAATCT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTC------TCTGAC--GGG-AGCAGGCCCTGAAATCTAGTGGC-GAGCTCGCTAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-TT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_magnoliae ------CCAGCGGAGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-TAGCT-------GG--TCCT------TCGGGGCCCCTC-AC-CCTC-GGGTGTTGAGACAG-CCCGCCGGCGG-CCAACCCAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTTCT--TACCCAAG-AAG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_quercina GGTGAACCAGCGGAGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-TAGCT-------GG--TCCT------TCGGGGCCCCTC-AC-CCTC-GGGTGTTGAGATAG-CCCGCCGGCGG-CCAACCCAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTT-T--TACCCAAG--AG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sclerotioides -------------AGGGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTCACC-----GAGGCCCCTC-GG-AAAC-----GAGGAG-CAG-CCCGCCGGCGG-CCGACCAAACTCTTG-TTTC-TCAGTGGATCT-CTGAGTAA--AAAA-AAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCA----CTGCTTGGTGTTGGGG-CACCGCC-------TGTAAA-AGGG---CGGGCCCTGAAATCTAGTGGC-GAGCTCGCCGGGACCCCGAGCGTAGTAAATTATAT-TTCG-TT-CTGGAA----GGCCCCGGCGGTGCCCTGCCGTTAAACCCCCAACTC-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._3 -------------AGGGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CTTCTTC--ACTGAAGCCCCCT-GG-GAAC-----AGGGAG-CAG-CCCGCCGGCGG-CCAACTAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CAATGCTT------TG-GAG-ACAA-AGCATGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._4 -------------AGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-ATGCC-------GG--CCCCCT----TGGGGGCCCCTC------TCCT--GGAGGAG-CAG-CACGCCGGCGG-CCAAC-TAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._5 -------------AGGGATCATTGCTGGAACGCGC--C-T---CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GG--CCCCCC--TTGGGGGGCCCCTCGTTCCTGAC----GAGGAG-CAGGCTCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTAATTTGAAACT-CTGAGAAT--AAAACATAAATGAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT----TGTGTAAAAGCG-AGGCAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACTCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGAC-TGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._6_AY485732 -------------AGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-TAGCT-------GG--TCCC------TCGGGGCCCCTC-AC-CCTC-GGGTGTTGAGACAG-CCCGTCGGCGG-CCAACCTAACTCTTG-TTTTTACACTGAAACT-CTGAGCAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTTCT--TACCCAAG-AAG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._6_AY485734 -------------AGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-TAGCT-------GG--TCCC------TCGGGGCCCCTC-AC-CCTC-GGGTGTTGAGACAG-CCCGTCGGCGG-CCAACCTAACTCTTG-TTTTTACACTGAAACT-CTGAGCAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTTCT--TACCCAAG-AAG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._7 -------------AGGGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCCC----TGGGGTCCCTTTTGT-CTCAA----AAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTACACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACT--CTTGAAAATTTGACCTCGGATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._8 -------------AGGGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TT--TGTTGCCTCGGCGC-TGCTG-------GT--CTTCAC----AGGCCCTTTGCTTCA-CAGCA----AAGAGA-CGG-CACGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAA--AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCA----TTGCTTGGTGTTGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCTAGGACCCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._9_AJ312348 ---------------GGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCC--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTCTTC--ACTGAGGCCCCCT-AG-AAAC-----AGGGAG-CAG-CCCGCCGGTGG-CCAACTAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._9_AJ312366 ---------------GGATCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCC--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTCTTC--ACTGAGGCCCCCT-GG-AAAC-----AGGGAG-CAG-CCCGCCGGTGG-CCAACTAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_sp._9_CBS_117165 ------------------TCATTGCTGGAACGCGC--TT----CGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCC--A-CTGTTGCCTCGGCGC-AGGCC-------GG--CCTCTTC--ACTGAGGCCCCCT-GG-AAAC-----AGGGAG-CAG-CCCGCCGGTGG-CCAACTAAACTCT-G-TTTCTATAGTGAATCT-CTGAGTAA--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCC-------TGTAAA-AGGG---CAGGCCCTGAAATCTAGTGGC-GAGCTCGCCAGGACCCCGAGCGTAGT-AGTTATAT-CTCG-CT-CTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTCAGT-------------------AAATATCGCACAT-CCCACAG-C-ATGA---------------A-CTCCACCAAGCCC--ACCGTGC-GCACATCGT-CATCA-----TTGGTGCGCGACTGCCTGCGCGGCTTCATCA--CCCCT---CAAA-C----CATTTT-CACCC--CTCCC-TCTGGGTTTTTTTTCCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAG-CCGCTTATCTCCTA---TGCAAAACCC--TGCTGGCATTAA-CCACTCC-TTGCCACCGCCAACACCAACTCTACCACTTTCAAC-CCTAT--CAA---TCTCCCAGGCGAAACGAA---------------------CTG-TCAA-------------GAATATGAA-GCT-GACTTACT-CTCCACACA-GCC-GCCGAGCTGGGTAAGGGTTC-TTCAAA- Phomopsis_theicola_AF230759 ---------------------------------------------------------AACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTGAA--TGGGGTCCCTCT-GG-AGACA----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTAAACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTT------TCTGAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GCCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_theicola_AF230762 ---------------------------------------------------------AACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTGA---TGGGGTCCCTCT-GG-AGACA----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTACACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTC------TCTGAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_theicola_AY485724 -------------AGGGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTAAA--TGGGGTCCCTCT-GG-AGACA----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTAAACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTT------TCTAAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATTTGACCTCGGATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_theicola_CBS_117166 ---------------GGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTGA---TGGGGTCCCTCT-GG-AGACA----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTACACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTT------TCTAAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTTAGT-------------------AAACACCAC-AAT-CCC--AG-C-ACCA---------------ACTACC---TTGTCCT-CGCATTTTGCCCCAAAT-CATCA--------GCGTGCGGTTGTTCGTGTGGCTTCGTCGCACTGGG---CA-G-C---GCATTTT-CACCC--CGCCC-TCTGG--ATTTT--TCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGGAGCTTATCTCACACACC-CAAAACCC--TGTT-ACATCA-CCCACTCC-AT-GC-CACAACTA--CGTCC--------------ACC-AT--CAACCTCAACCCT-TC-AATTATC------------------------------------------AAAAAACAT-GCT-GACCTTTCCTTCTTCACA-GCC-GCCGAGCTTGGTAAGGGTTC-TT----- Phomopsis_theicola_CBS_117501 ---------------GGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTAAA--TGGGGTCCCTCT-GG-AGACG----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTAAACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTC------TCTGAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-CTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTTAGT-------------------AAACACCAC-AAT-CCC--AG-C-ACCA---------------ACTACC---TTGTCCT-CGCATTTTGCCCCAAAT-CATCA--------GCGTGCGGTTGTTCGTGTGGCTTCGTCGCACTGGG---CA-G-C---GCATTTT-CACCC--CGCCC-TCTGG--ATTTT--TCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGGAGCTTATCTCACACACC-CAAAACCC--TGTT-ACATCA-CCCACTCC-AT-GC-CACAACTA--CGTCC--------------ACC-AT--CAACCTCAACCCT-TC-AATTATC------------------------------------------AAAAAACAT-GCT-GACCTTTCCTTCTTCACA-GCC-GCCGAGCTTGGTAAGGGTTCCTTCAA-- Phomopsis_theicola_CBS_187.27 ---TGACCAGCGGAGGGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTGA---TGGGGTCCCTCT-GG-AGACA----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTACACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTC------TCTGAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATTTGACCT----------------------???-----CATCGAGAAGTTCGAGAAGGAAGGTTAGT-------------------AAACACCAC-AAT-CCC--AG-C-ACAA---------------ACTACC---TTGTCCT-CGCATTTTGCCCCAAAT-CATCA--------GCGTGCGGTTGTTCGTGTGGCTTCGTCGCACTGGG---CA-G-C---GCATTTT-CACCC--CGCCC-TCTGG--ATTTT--TCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGGAGCTTATCTCACACACC-CAAAACCC--TGTT-ACATCA-CCCACTCC-AT-GC-CACAACTA--CGTCC--------------ACC-AT--CAACCTCAACCCT-TC-AATTATC------------------------------------------AAAAAACAT-GCT-GACCTTTCCTTCTTCACA-GCC-GCCGAGCTTGGTAAGGGTTCCTTCAA-- Phomopsis_theicola_CPC_5424 ---------------GGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-AGGCC-------GT--CCCCTAAA--TGGGGTCCCTCT-GG-AGACG----GAGGAG-CAG-CCGGCCGGTGG-CCAAATTAACTCT-G-TTTTTAAACTGAAACT-CTGAGTAC--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGTTGGGG-CACTGCTT------TCTAAC--GAG-AGCAGGCCCTGAAATATAGTGGC-GAGCTCGCCAGGACTCCGAGCGTAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCC-TGGCGGTGCCCTGCCGTTAAACCCC-AACTT-CT-GAAAATTTGACCTCGGATCAGGTAGGAATA-----???----------------------------GTTAGT-------------------AAACACCAC-AAT-CCC--AG-C-ACAA---------------ACTACC---TTGTCCT-CGCATTTTGCCCCAAAT-CATCA--------GCGTGCGGTTGTTCGTGTGGCTTCGTCGCACTGGG---CA-G-C---GCATTTT-CACCC--CGCCC-TCTGG--ATTTT--TCATTTTCAG--TGCGGGTGCGGGG----TGC--GCTTAT----CAGGGAGCTTATCTCACACACC-CAAAACCC--TGTT-ACATCA-CCCACTCC-AT-GC-CACAACTA--CGTCC--------------ACC-AC--CAACCTCAACCCT-TC-AATTATC------------------------------------------AAAAAACAT-GCT-GACCTTTCCTTCTTCACA-GCC-GCCGAGCTTGGTAAGGGTTCTTTCAAA- Phomopsis_vaccinii_AF317557 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGGACTTATACCT-TA-CTGTTGCCTCGGCGC-TAGCT-------GG--CCCC------TCGGGGCCCCTC-AC-CCTC-GGGTGTTGAGACGG-CCCGCCGGCGG-CCAACCCAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-T--TACCCAA--AGG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Phomopsis_vaccinii_AF317563 ---------------GGATCATTGCTGGAACGCGC--CCC---AGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CTGTTGCCTCGGCGC-TAGCT-------GG--CCCC------TCGGGGCCCCTC-AC-CCTC-GGGTGTTGAGACGG-CCCGCCGGCGG-CCAACCCAACTCTTG-TTTTTACACTGAAACT-CTGAGAAT--AAAACATAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCCT-T--TACCCAA--AGG----CAGGCCCTGAAATTCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CT-TTGGAA----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAATTTGACCTCGGATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Phomopsis_viticola_AF230751 ---------------------------------------------------------AACCCTTTGTGAACTCATACCT-TA-CCGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--TGGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAAC-AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTC------CCCCCCCGGGG-AGCAGGCCCTGAAATCCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CTCCGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_viticola_AF230763 ---------------------------------------------------------AACCCTTTGTGAACTCATACCT-TA-CCGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--CGGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAAC-AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTCC-----CCCCCCCGGGG-AGCAGGCCCTGAAATCCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCGGCTCCGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_viticola_AY485757 -------------AGGGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CCGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--CGGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAAC-AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTCC-----CCCCCCCGGGG-AGCAGGCCCTGAAATCCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CTCCGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAGTTTGACCTCGGATCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_viticola_AY485765 -------------AGGGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTCATACCT-TA-CCGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--TGGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAAC-AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCT-------CCCCCCCGGGG-AGCAGGCCCTGAAATCCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CTCCGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAGTTTGACCTCGGATCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phomopsis_viticola_AY485775 -------------AGGGATCATTGCTGGAACGCGC--CCC---TGGCGCAC-CCAGAAACCCTTTGTGAACTTATACCT-TA-CCGTTGCCTCGGCGC-AGGCC-------GG--CCCCCCC--TGGGGGGCCCCTC-GG-AGAC-----GAGGAG-CAGGCCCGCCGGCGG-CCAAGTTAACTCTTG-TTTTTACACTGAAACT-CTGAGAAAC-AAAACACAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTG-AATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGG-CATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCC----TGGCTTGGTGATGGGG-CACTGCTCC-----CCCCCCCGGGG-AGCAGGCCCTGAAATCCAGTGGC-GAGCTCGCCAGGACCCCGAGCGCAGT-AGTTAAACCCTCG-CTCCGGGA-----GGCCCTGGCGGTGCCCTGCCGTTAAACCCCCAACTT-CT-GAAAGTTTGACCTCGGATCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN SETS; CHARSET its (CHARACTERS = Combined) = 58-105 112-242 384-557; CHARSET ef (CHARACTERS = Combined) = 640-643 662-692 706-746 751-1003 1022-1094; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Combined) = N: 1-1107; CODONPOSSET CodonPositions (CHARACTERS = Combined) = N: 1-1107; END; [ The following blocks are output data for analysis step 3038 ] BEGIN TREES; TITLE Tb7811; LINK TAXA = TaxaForAnalysisStep3038; TREE Fig._3 = [&R] ('Cylindrocladiella peruviana AY793459 / AY725736',((((Phomopsis_theicola_CBS_117166,(Phomopsis_theicola_CBS_187.27,(Phomopsis_theicola_CPC_5424,Phomopsis_theicola_CBS_117501)))Phomopsis_theicola,((((Phomopsis_cuppatea_R164AN,Phomopsis_cuppatea_CPC_5416,Phomopsis_cuppatea_CBS_117499)Phomopsis_cuppatea,Phomopsis_sp._9_CBS_117165),Diaporthe_phaseolorum),((Diaporthe_ambigua_CBS_117167,(Diaporthe_ambigua_CPC_5409,Diaporthe_ambigua_CBS_117374,Diaporthe_ambigua_CBS_117371),Diaporthe_ambigua_CBS_117170,Diaporthe_ambigua_CBS_117373,Diaporthe_ambigua_CPC_5413,Diaporthe_ambigua_CBS_117372),(Diaporthe_ambigua_CPC_5419,Diaporthe_ambigua_CPC_5425,Diaporthe_ambigua_CPC_5412,Diaporthe_ambigua_CPC_5423))Diaporthe_ambigua)),((Diaporthe_aspalanthi_CBS_117500,Diaporthe_aspalanthi_CPC_5430,Diaporthe_aspalanthi_CPC_5410),Diaporthe_aspalanthi_CBS_117169,Diaporthe_aspalanthi_CBS_117168)Diaporthe_aspalanthi)Phomopsis,(Libertella_sp._CBS_117164,(Libertella_sp._R686I,Libertella_sp._CBS_117163,Libertella_sp._R699H))Libertella_sp.)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2482] END;