#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 01, 2025; 7:48 GMT

TreeBASE (cc) 1994-2008

Study reference:
Jansen R.K., & Palmer J. 1988. Phylogenetic implications of chloroplast DNA restriction
site variation in the Mutisieae (Asteraceae). American Journal of Botany,
75: 753-766.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S330]

[ The following blocks are input data for analysis step 324 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep324;
        DIMENSIONS NTAX=22;
        TAXLABELS
            Acourtia_microcephala
            Ainsliaea_dissecta
            Barnadesia_caryophylla
            Carthamnus_tinctorius
            Cephalaria_leucantha
            Chuquiragua_oppositifolia
            Dasyphyllum_diacanthoides
            Dipsacaceae
            Dipsacus_sativus
            Gerbera_jamesonii
            Gochnatia_pauciflora
            Helianthus_annuus
            Lactuca_sativa
            Leibnitzia_seemannii
            Mutisia_acuminata
            Onoseris_hyssopifolia
            Pentas_lanceolata
            Perezia_multiflora
            Psychotria_bacteriophila
            Rubiaceae
            Stifftia_chrysantha
            Trixis_californicum
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1633]

	TITLE Table_3;
	LINK TAXA = TaxaForAnalysisStep324;
	DIMENSIONS NCHAR=55;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;
	CHARSTATELABELS
		1  Ava_I,
		2  Ava_I,
		3  Ava_I,
		4  Ava_I,
		5  Ava_I,
		6  Ava_I,
		7  Ava_I,
		8  Ava_I,
		9  Ava_I,
		10  Ava_I,
		11  Ava_I,
		12  Bam_HI,
		13  Bam_HI,
		14  Bam_HI,
		15  Bam_HI,
		16  Bam_HI,
		17  Ban_I,
		18  Ban_I,
		19  Ban_I,
		20  Ban_I,
		21  Ban_I,
		22  Bst_XI,
		23  Bst_XI,
		24  Bst_XI,
		25  Bst_XI,
		26  Bst_XI,
		27  Bst_XI,
		28  Bst_XI,
		29  Eco_RV,
		30  Eco_RV,
		31  Eco_RV,
		32  Eco_RV,
		33  Eco_RV,
		34  Eco_RV,
		35  Eco_RV,
		36  Eco_RV,
		37  Eco_RV,
		38  Hae_II,
		39  Hae_II,
		40  Hae_II,
		41  Hind_III,
		42  Hind_III,
		43  Hind_III,
		44  Nco_I,
		45  Nco_I,
		46  Nsi_I,
		47  Nsi_I,
		48  Nsi_I,
		49  Nsi_I,
		50  Nsi_I,
		51  Nsi_I,
		52  Sac_I,
		53  Sac_I,
		54  Sac_I,
		55  Sac_I,
		;

MATRIX
[                                     10        20        30        40        50     ]
[                                      .         .         .         .         .     ]
Acourtia_microcephala         0010010000001011000000101001000000010001010000000100000
Ainsliaea_dissecta            0000000010000000000100101101101000010001000000000000000
Barnadesia_caryophylla        0100000100010100111010000000000000100000011101010010011
Carthamnus_tinctorius         0011000010000000100000110001010001010001001000000100000
Cephalaria_leucantha          0000000000000000000000000000000000000000000000000000000
Chuquiragua_oppositifolia     0110000100010100011000000000000011100000000101011010001
Dasyphyllum_diacanthoides     0100000100010100001000000000000001100000000111010010001
Dipsacaceae                   0000000000000000000000000000000000000000000000000000000
Dipsacus_sativus              0000000000000000000000000000000000000000000000000000000
Gerbera_jamesonii             1010011001001001000000101011000100011111110100101110010
Gochnatia_pauciflora          0010000010000000000100101101100000010001000100000100000
Helianthus_annuus             0010000010000000000001110001010000010001000010000100000
Lactuca_sativa                0010000010001010000001010001010010010001000000000101000
Leibnitzia_seemannii          1010111001000001000000111011000100011111110110100110110
Mutisia_acuminata             0010010000001001000000101001000100010001010100000100000
Onoseris_hyssopifolia         0010100010000000000010101001001010010001000000000100000
Pentas_lanceolata             0000000000000000000000000000000000000000000000000000000
Perezia_multiflora            0001010001101011000000100001010010010001011000000101000
Psychotria_bacteriophila      0000000000000000000000000000000000000000000000000000000
Rubiaceae                     0000000000000000000000000000000000000000000000000000000
Stifftia_chrysantha           0010000010000010000000101101100000010001000000000100101
Trixis_californicum           0011010000101011000000101001000000010001010000000100000
;
END;

[ The following blocks are output data for analysis step 324 ]
BEGIN TREES;
      TITLE Tb5104;
      LINK TAXA = TaxaForAnalysisStep324;
      TREE Fig._3 = [&R] ((Dipsacaceae,Rubiaceae),(((Barnadesia_caryophylla,Chuquiragua_oppositifolia),Dasyphyllum_diacanthoides),(((((Ainsliaea_dissecta,Gochnatia_pauciflora),Stifftia_chrysantha),Onoseris_hyssopifolia),(((Gerbera_jamesonii,Leibnitzia_seemannii),Mutisia_acuminata),(Acourtia_microcephala,(Perezia_multiflora,Trixis_californicum)))),(Helianthus_annuus,(Lactuca_sativa,Carthamnus_tinctorius)))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1504]


END;
BEGIN TREES;
      TITLE Tb5104;
      LINK TAXA = TaxaForAnalysisStep324;
      TREE Fig._2 = [&R] ((Dipsacaceae,Rubiaceae),(((Barnadesia_caryophylla,Chuquiragua_oppositifolia),Dasyphyllum_diacanthoides)Barnadesiinae,(((((Ainsliaea_dissecta,Gochnatia_pauciflora),Stifftia_chrysantha),Onoseris_hyssopifolia)Gochnatiinae,(((Gerbera_jamesonii,Leibnitzia_seemannii),Mutisia_acuminata)Mutisiinae,(Acourtia_microcephala,(Perezia_multiflora,Trixis_californicum))Nassauviinae)),(Helianthus_annuus,(Lactuca_sativa,Carthamnus_tinctorius))))Asteraceae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1503]


END;