#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 19, 2025; 23:46 GMT

TreeBASE (cc) 1994-2008

Study reference:
Sosa V. 2006. Molecular and morphological phylogenetic study of subtribe Bletiinae
(Epidendreae, Orchidaceae). Systematic Botany, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1694]

[ The following blocks are input data for analysis step 3347 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep3347;
        DIMENSIONS NTAX=22;
        TAXLABELS
            Basiphyllaea_carabiaiana
            Basiphyllaea_hamiltoniana
            Bletia_adenocarpa
            Bletia_campanulata_s.l.
            Bletia_catenulata_s.l.
            Bletia_coccinea
            Bletia_gracilis
            Bletia_jucunda
            Bletia_lilacina
            Bletia_macristhmochila
            Bletia_neglecta
            Bletia_parkinsonii
            Bletia_punctata
            Bletia_purpurata
            Bletia_purpurea
            Bletia_reflexa
            Bletia_urbana
            Chysis_bractescens
            Helleriella_guerrerensis
            Hexalectris_revoluta
            Isochilus_linearis
            Ponera_striata
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M901]

	TITLE 'ITS-trnL';
	LINK TAXA = TaxaForAnalysisStep3347;
	DIMENSIONS NCHAR=150;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3" MISSING=? GAP= -;

MATRIX
[                                     10        20        30        40        50        60        70        80        90        100       110       120       130       140       150]
[                                      .         .         .         .         .         .         .         .         .         .         .         .         .         .         .]
Basiphyllaea_carabiaiana      030112013330032312301???1232?322?2030000031200201120313121?1121021222332301233233121112?03120233??2120201202??0221112030121123310032103121????????????
Basiphyllaea_hamiltoniana     03011201133303231230112112222221?123202201102200112211312111103221222112301033231121112201120231?22102000202??0121310010121121312032103001100111200323
Bletia_adenocarpa             0301100133320323303211011222032??1030000011000001102113101131010200203303010132311211102033203332?1?20001212??0321332212103123310032103303????????????
Bletia_campanulata_s.l.       0301100103320321103212011222032??1030000011000001102113101131010202203303010132311211100033203332?1?20001212??0321332212103123310032103101130111210323
Bletia_catenulata_s.l.        0101100333300333121011011222122221031000031000001?23113101111012212203303300332311211122013202132?1?22001202??1321312030101123310032103101100111200323
Bletia_coccinea               ?131100133320323303211011222032??1030000011000001102113101131010202?03303010132311211102033203332?1?20001212??0321332212103123310032103303????????????
Bletia_gracilis               0301100333320323103211011222032??1030000011000001102113101131010200003303010132313011102333203333?1?20001212??0321332212103323310032103303100111210020
Bletia_jucunda                0301100333320323103211??????03?121030000011000001102113101131010200203303010132311211102033203332?1?20201212??0321332012103123310032103101????????????
Bletia_lilacina               23011021333223211032110200320?22?2030000031020022120113121131230012203323010132311211120033202332?1?20001212??0321310010101123312012103101130111210023
Bletia_macristhmochila        03011001033203211032120112220322?1030000011000001102313101131310302203303010132311211102033203332?1?20001212??0321332212103123310032103101230111210300
Bletia_neglecta               23011021333223211032110200320?22?2010000031020022100113121131230010203323012132311211122033202332?1?20001212??03213320301111233?2012103101?30111210023
Bletia_parkinsonii            030110?133320323123211311222?322?203020013102000112011312?133012012203323210112311212122033202132?1?20201212??2321312010103123312012103101?00111200323
Bletia_punctata               03011001333203231232113112220322?2030200131020001120113121?33012012203323210132311212122033202132?1?20201212??2321312010103123312012103101????????????
Bletia_purpurata              03011001333203231232113112220322?2030200131020001100113121?31012012203323210112311212122033202132?1?20201212??2321312010103123312012103101????????????
Bletia_purpurea               23011001333223??11321???10200302?2010000031120222100113121131230012203323010132311211122033202332?1?20201212??0321310030101123312012103101100111200323
Bletia_reflexa                233110213332232110321???10200302?20300000310200221?0113121131230010003323010132333011102333203333?1?20001212??0321332212103323310032103303????????????
Bletia_urbana                 0301100103320321103212011222032??103000001100000110211310113101020220330301013231121110203320333??2120001212??0321332212103123310032103101????????????
Chysis_bractescens            03002021330032231012?202??02232221020000013?0000132033330021101011220330301233333123132202312231??22000?0202320311130030301123310032123201111111210303
Helleriella_guerrerensis      0300200103200223103031102222232201030020031?00001320333312331030312203322030113311231322033200310322203121100003003300303013113100??112321301330301323
Hexalectris_revoluta          0101120011220231111011002?????2221030221011220001213131322?112302122231232?231231121112201320233?2210000120232311??100101211212203?1312123100111300303
Isochilus_linearis            0000201101200002323331112202222201010020011?2200132033331233103031?203322011131111231322033120310122223??1100003203300321033113120321031213013?130132?
Ponera_striata                23002001132002231210311023????21?1231022013?00?0122231131233103033220132323213111121212201222231032222112110222120310012301111220301312321301330311323
;
END;

[ The following blocks are output data for analysis step 3347 ]
BEGIN TREES;
      TITLE Tb8120;
      LINK TAXA = TaxaForAnalysisStep3347;
      TREE 'ITS-trnL 1' = [&R] (Chysis_bractescens,((Hexalectris_revoluta,(Basiphyllaea_hamiltoniana,(Basiphyllaea_carabiaiana,(Bletia_catenulata_s.l.,((Bletia_jucunda,((Bletia_gracilis,(Bletia_adenocarpa,Bletia_coccinea)),(Bletia_urbana,(Bletia_campanulata_s.l.,Bletia_macristhmochila)))),(((Bletia_lilacina,Bletia_neglecta),(Bletia_purpurea,Bletia_reflexa)),(Bletia_purpurata,(Bletia_parkinsonii,Bletia_punctata)))))))),(Ponera_striata,(Isochilus_linearis,Helleriella_guerrerensis))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4723]


END;
BEGIN TREES;
      TITLE Tb8120;
      LINK TAXA = TaxaForAnalysisStep3347;
      TREE 'ITS-trnL 3' = [&R] (Chysis_bractescens,((Hexalectris_revoluta,(Basiphyllaea_hamiltoniana,(Basiphyllaea_carabiaiana,(Bletia_catenulata_s.l.,(((Bletia_jucunda,(Bletia_gracilis,(Bletia_adenocarpa,Bletia_coccinea))),(Bletia_urbana,(Bletia_campanulata_s.l.,Bletia_macristhmochila))),(((Bletia_lilacina,Bletia_neglecta),(Bletia_purpurea,Bletia_reflexa)),(Bletia_purpurata,(Bletia_parkinsonii,Bletia_punctata)))))))),(Ponera_striata,(Isochilus_linearis,Helleriella_guerrerensis))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4721]


END;
BEGIN TREES;
      TITLE Tb8120;
      LINK TAXA = TaxaForAnalysisStep3347;
      TREE 'ITS-trnL 2' = [&R] (Chysis_bractescens,((Hexalectris_revoluta,(Basiphyllaea_hamiltoniana,(Basiphyllaea_carabiaiana,(Bletia_catenulata_s.l.,((Bletia_jucunda,((Bletia_coccinea,(Bletia_adenocarpa,Bletia_gracilis)),(Bletia_urbana,(Bletia_campanulata_s.l.,Bletia_macristhmochila)))),(((Bletia_lilacina,Bletia_neglecta),(Bletia_purpurea,Bletia_reflexa)),(Bletia_purpurata,(Bletia_parkinsonii,Bletia_punctata)))))))),(Ponera_striata,(Isochilus_linearis,Helleriella_guerrerensis))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4722]


END;