#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 8:19 GMT TreeBASE (cc) 1994-2008 Study reference: Sosa V. 2006. Molecular and morphological phylogenetic study of subtribe Bletiinae (Epidendreae, Orchidaceae). Systematic Botany, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1694] [ The following blocks are input data for analysis step 3348 ] BEGIN TAXA; TITLE TaxaForAnalysisStep3348; DIMENSIONS NTAX=23; TAXLABELS Basiphyllaea_carabiaiana Basiphyllaea_hamiltonii Bletia_adenocarpa Bletia_campanulata Bletia_catenulata Bletia_coccinea Bletia_gracillis Bletia_jucunda Bletia_lilacina Bletia_machristmochila Bletia_neglecta Bletia_parkinsonii Bletia_punctata Bletia_purpurata Bletia_purpurea Bletia_reflexa Bletia_urbana Chysis_bractescens Helleriella_guerrerensis Hexalectris_grandiflora Hexalectris_revoluta Isochilus_linearis Ponera_striata ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M900] TITLE ITS; LINK TAXA = TaxaForAnalysisStep3348; DIMENSIONS NCHAR=721; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Basiphyllaea_carabiaiana TCGAGACCGAAATAAA-TATCGAGCGATTCGGAGAACCCGTGCATCGGCGA---CGGCGGCTGCCGTCGC-GTAACATCCGTCCCGGTCGCAGGCCTCATCCCC--------GTGTGGGGGG----------CACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAGATATCGAAAGAACACGAGCCCCGCATCGGG-CTCGGTGGCGCGGCGTGC-GTCGCACGCCGCAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATA-GTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAAATTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCATTGGTTCGCTCCGTGCCAGC--TCCATCC-----CACCC------GATGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCCCGCCGGCGCGGCGGGCTGAA-AGTGGGCG--ATCGTCTCATTGC---CCGCGAACAACGAGGGGTGGACG---------GAACGAGGCCTACGTTGGG--TCGTGCCGGCC---CGAGAGAAGATTACG--CCCCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GGCGGCGGCTTGGAAT Basiphyllaea_hamiltonii TCGAGACCGAAATAAAATATCGAGCGATTCGGAGAACCCGTGCATCGGCGA---CGGCGGCCGCCGTCGC-GTATCATCCGTCCAGGTCGT-GGCCTGATCCCC----GCCGGGGGGGCGG----------CCGCGATGGAGGGCGGATGAGACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAGGAGACACGAGCCCCGCGCAGGG-CTCGGTGGCATGGCGTGCCGTCGCACGCCATGGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCGTCGCGTCGCTCCGCGCCAGCCCTCCATCC-----CACCC------AGTGGGTGTGCCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGTCGGGCTGAAGAGCGGGCG--ATCGTCTCATCGCGC-CCACGAGCAACAAGGGGTGGATG---------GAAAGAGGCCTACGTTGCG--TCGTGCTGGCC---CGAGAAAAGATCACG--CCCCCGAGGCGA----TCCCGACCC--ATGCGCCGA-----TCC--ATCCACAGACGGCGGCTTGGAAT Bletia_adenocarpa TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTTCCAGTCGT-GGCCTCGTCCCC----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_campanulata TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCG----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAAGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAAAATGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGTGGCTTGGAAT Bletia_catenulata TCGAGACCGAAATAA--CATCGAGCGATTCGGAGAACCCGTGCATCACCGA---TGGCGGCTGCCGTCGC-GTAACATCCTTCCCGGCTGT-GGCCTCATCCCCC---ACCGGGCGGGGGGGG--------CCACGATGCAGGACGGATGAAACACTCAAAACCGGCG-CAGTCACGCGCCAAGGGAAAATATTGAAAAAACACGAGCCC-GCTCCGGG-CTCAGTTGCGTGGCGTGCCCTCGCACGCCACGGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCCGCTCCCACCCCG----AATGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCGCTGCC---CGCGAGCAACAAGGGGTGGATG---------GAACGAGGCCTCCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATTACACACCCCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTAGGAAT Bletia_coccinea ????????????????-CATCGAG-AATTCGGAGT-TCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTTCCAGTCGT-GGCCTCGTCCCCA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACTTGGTGCGAATTGCA-AATCCCGCGAACCATCGA-AATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_gracillis TCGAGAC-GAAATAA--T-----GCGATTCGGAGAACCCGTGCATCAGCGA---TGGCGGCTGCCATCGC-GTAGCATCCGTCCCAGTCGT-GGCCTCGTCCCC----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----TGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAAAATCCCGCGAACCATCGAAAATTTGAACGCAAGTTGCGCCCGAGGCCAGCAGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCTCACCGGCACGGCGGGCTGAAGTGTGGGTG--ATCTTCTCATTTC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTTCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_jucunda TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---TGGCGGCTGCCGTCGC-GTAGCATCCGTCCCAGTCGT-GGCCTCGTCCCC----------ATCGGGGGG--------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAATTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCAT-C----CCACCC------AACGGGTGTGTCGGGCGAGGCTCGGATGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAAGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_lilacina TCGAGACCGAAATGA--TATTGAGCGATTCGGAGAACCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCCA----GAATGAGGGG-------------CACGATGAAGGACGGATGAAACACTCAAA-CCGGCGTCAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCCGCACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCACAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAAAGTGGGTG--ATCGTCTCATTGC---CCGCAAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---CGAGAAAAGATCACA--CCCCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_machristmochila TCGAGACCGAAATA---TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCGA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGTCGGG-CTCAGTGGCGTGGCGTGCCGTTGC-CGCCTCATGGAT----CGAAACCACTCTCGGCAATGGATATCTCGGCTCTCGCATC-ATGAAGATCGCAGCGAAATGCGATACGTGGTGCCAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_neglecta TCGAGACCGAAATGA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCCA----GAATGAGGGG-------------CACGACGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCCACACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAC----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------GACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCCCTAAAAAAGAATATTACC--CCCCCGAGGTGA----TCC-GACCC--ACGCGCCGA-----TCC--AAC----GACGGCGGCTTGGAAT Bletia_parkinsonii TCGAGAC-GAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCG----CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGG-TGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCACCGGG-CTCGGTGGCGTGG-----CGTTGCACGTCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_punctata TTGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGGATGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCACCGGGTCTCGGTGGCGTGG-----CGTTGCACGTCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGC---CCGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_purpurata TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGGATGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCACACCGGG-CTCGGTGGCGTGG-----CGTTGCACGCCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGC---CCGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_purpurea TCGAGACCGAAATGA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCGTCC--CCCCGTCGT-GGCCTCGTCCCC-------AGAATGAGGGG----------CACGACGAAGGACGGACGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAACATATCGAGAGAACACGGGGCCCACACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCAT-C----CCACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCATTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---CGAGAAGACATTACA--CCCCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_reflexa TCGAGAC-GAAATGA--TATCGAGCGATTCGGAGATCCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCC-------AGAATGAGGG----------GCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCC-CACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAAAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCTCACCGGCACGGCGGGCTGAAGTGTGGGTG--ATCTTCTCATTTC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTTCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_urbana TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCGA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Chysis_bractescens TCGAGACCCAAATA---TATCGAGCGATTCGGAGAACCCGTGAATGAGCGG---CGGCAGCTGCCGTCGC-GAAATTGCCGTCCCAGCCGT-GGCCTCGTC-------AGAGAGGTGGGGGGG--------CCACGAGGAAGGACGGATGAAACTC--AAA-CCGGCG-CAGCTACGCGCCAAGGGA--ATATCGAAAAA-CACGAGCCCTGTATCGGG-TTTAGTGGCGTGGAGTGCG-TCGCACACCACACGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CATCC------GATGGGTGTGTCGGTCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGGGGGTC--GTCGTCTCATCGGC---CACGAACAACAAGGGGTGGATGAGAGCTGT-GAGCAAGGCCTACGTTGTC--TCGTGCCGGCC---TGAGAAAAGATTATA--CTCCCGT-TTGA----TCCCAACCC--ATGCGCC--CGG--TCC--ACG----GACGGCGGCTTGGAAT Helleriella_guerrerensis TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGAATGAGCGA---CGGCGGCAGTCGTCGC-GGAACAGCCGTCCCAGTCGT-GGCCTCATCTCCC-ATCGGGGGGTGGGGGG-------AACCACGATGAAGGGCGGATGAAA-ACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAATAT---GGAAAAACATGAGCCCTGCATCGGG-TTTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATGC----CCACCT------AACGGGCGTGTCGGTCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGTGGGTGTCATCATCTCATCATCGGCCGCGAACAACTAGGGGTGGATGCGCCATGCAAAGCTGTGCCTACGTTGTA--TCGTGATGGCC---TGAGAAAAGACTATA--CCCTCCAGGCGA----TCCCAACCC--ATGCGC-GTCG--ATCC--ACT----GGCGGCGGGTTGGAAT Hexalectris_grandiflora TCGAGACCGAAATAAAACACCGAGCGATTCGGAGAACCCGTGCATCGGCGAAGGCGGCGGCCGCCGCCGC-GCAGCATCCGTCCCGGTCGC-GGCCTCATCCCCCC---ACCGGG-GGGCGG---------CCACGATGGAGGACGGATGAGACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCGTCGGG-CTCGGTGGCCCGGCGTGCCGTCGCACGCCATAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCTCCGATGAAGAACGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------GATGGGCGTG-CGGGGGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCTCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCATTGCGC-CCACGGACGACAAGGGGTGGATG---------GAACGAGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAAAAGATCACG-GCCCCCGAGGCGAGAGATCCCAGCCC--ATGCGCCGACGGCATCC--ACC----GGCGGCGGCTTGGAAT Hexalectris_revoluta TCGAGACCGAAATAAAACATCGAGCGACTCGGAGAACCCGTGCATCGGCGAAGGCGGCCGCTGCCGCCGC-GCAGCATCCGTCCCGGTCGC-GGCCTCATCCCCC----CAACGG-GGGGGG---------CCACGATGAGG--CGGATGAGACACTCACA-CCGGCG-CAGCCACGCGCCAAGGGA-GATATCGAGA-AACCCGAGCCC-GCGTCGGG-CTCTGTGGCCGGGCGTGCCGTCGCACGCCGTAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGCGCCAGC--TCCATCT-----CGCCA-----CGATGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCATTGTG-CCGACGGACAACAATGGGTGGATG---------GAACGAGGCCTGCGTTGTG--CCGTGCTGGCC---CGAGAAAAGATCACG-GCCCCCGAGGCGAGAGATCCCAGCCC--ATGCGCCGACGGCATCC--ACC----GGTGGCGGCTTGGAAT Isochilus_linearis TCAAGAC-GA--TAAA-T-TCGAGCGATTCGGAAAACCCGTGAATGAAGC----CAGGGAGAGCGGCCCCTGGGAAAACCAGTCCGGTAGG-GGCTTTTTTTCCCCCAGGAGGGAGGGGGAGGGGCGGA--CCACGGCGAAGGGCGGTTGAAA-ACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGA--ATATCGAGGA--CACGAGCCCTGCATCGGG-TTTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGTT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGAT---------AGCGAAATGCGATACATGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCAGTCC-----CACCC------CACGGGTGTGTCGGCCGAGGCCCGGACGTGCAGAGTGGCCCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGTGGGTC--GTCATCTCATCACCGGCCGCGAGCAACTAGGGGTGGATG--CCATGCAAAGCTGTGCCTACGTTGTGCTTCGCGATGGCC---TGAGAATAGATTGCA--CCTTCCCGGCGA----TCCCGACCC--ATGCGCCGA-----TCCGAACC----GGCGGCGGCTTGGAAT Ponera_striata TCGAGACCGAGATGCAATATCGAGCGATTCGGAGAACCCGTGAATGAGCGA---CGGCCGCCGCCGTCGC-GGAACAGCCGTCCCGGCCGT-GGCCTCACCTCCC-----ATCGGTGGCGGCGGG------CCGCGATGCAGGGCGGATGAGA-ACTCAAA-CCGGCG-CAGCTACGCGCCAAGGGA--ATATCGA-AATTCACGAGCCCGGCGTCGGG-CCTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGATGGATCGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTCGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCCT-----GACGGGTGCGTCGGCCGAGGCCCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGCGGGGGTCGTCGTCTCATCATCGGCCGCGAGCAACCAGGGGTGGATGCGCCATGCGGAGCTGTGCCTGCGTTGCG--TCGTCATGGCC---CGAGGAAAGATCGTACCCCCCACAGGCAGGCGATCCCAACCCCCATGCGCCGA-----TCC--ACT----GGCGGCGGCTTGGAAT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = ITS) = N: 1-721; CODONPOSSET CodonPositions (CHARACTERS = ITS) = N: 1-721; END; [ The following blocks are output data for analysis step 3348 ] BEGIN TREES; TITLE Tb8121; LINK TAXA = TaxaForAnalysisStep3348; TREE ITS_consensus = [&R] ((((Basiphyllaea_carabiaiana,(Basiphyllaea_hamiltonii,(Hexalectris_grandiflora,Hexalectris_revoluta))),((((Bletia_adenocarpa,Bletia_coccinea,Bletia_gracillis),Bletia_jucunda,(Bletia_urbana,(Bletia_campanulata,Bletia_machristmochila))),(((Bletia_lilacina,Bletia_neglecta),(Bletia_purpurea,Bletia_reflexa)),((Bletia_parkinsonii,Bletia_punctata),Bletia_purpurata))),Bletia_catenulata)),(Helleriella_guerrerensis,(Isochilus_linearis,Ponera_striata))),Chysis_bractescens); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4724] END;