#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 21, 2024; 6:18 GMT TreeBASE (cc) 1994-2008 Study reference: Burgess T., Barber P., Sufaati S., Xu D., Hardy G., & Dell B. 2006. Mycosphaerella spp. on Eucalyptus in Asia; new species, new hosts and new records. Fungal Diversity, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1702] [ The following blocks are input data for analysis step 3370 ] BEGIN TAXA; TITLE TaxaForAnalysisStep3370; DIMENSIONS NTAX=41; TAXLABELS Botryosphaeria_ribis Mycosphaerella_citri_CBS116426 Mycosphaerella_citri_CMW22517 Mycosphaerella_citri_CMW22518 Mycosphaerella_citri_CPC10522 Mycosphaerella_colombiensis Mycosphaerella_cryptica Mycosphaerella_eucalyptorum Mycosphaerella_fijiensis Mycosphaerella_flexuosa Mycosphaerella_fori Mycosphaerella_lateralis Mycosphaerella_madeirae_CBS112895 Mycosphaerella_madeirae_CPC3746 Mycosphaerella_marasasii Mycosphaerella_marksii_CMW22520 Mycosphaerella_marksii_CMW22529 Mycosphaerella_marksii_CMW22530 Mycosphaerella_marksii_CMW22531 Mycosphaerella_marksii_CMW9091 Mycosphaerella_marksii_CMW9092 Mycosphaerella_obscurus_CBS119973 Mycosphaerella_obscurus_CMW23439 Mycosphaerella_parkii Mycosphaerella_sp._CMW22515 Mycosphaerella_sp._CMW22516 Mycosphaerella_sp._CMW22519 Mycosphaerella_sumatrensis_CPC11171 Mycosphaerella_sumatrensis_CPC11178 Mycosphaerella_verrucosiafricana_CPC11167 Mycosphaerella_verrucosiafricana_CPC11170 Mycosphaerella_vietnamensis_CBS119974 Mycosphaerella_vietnamensis_CMW23442 Mycosphaerella_yunnanensis_CBS119975 Mycosphaerella_yunnanensis_CBS119976 Mycosphaerella_yunnanensis_CMW23445 Stenella_pseudoparkii_CBS110988 Stenella_pseudoparkii_CBS110999 Stenella_sp._CPC11671 Stenella_xenoparkii_CBS111088 Stenella_xenoparkii_CBS111185 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M921] TITLE Citri_Clade; LINK TAXA = TaxaForAnalysisStep3370; DIMENSIONS NCHAR=626; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Botryosphaeria_ribis NNNNNNNNNNNNNNNNNGGAAGGATCATTACCGAGTTGAT---TCGAG-----CTCC-GGCTC-GAC-TCTCCCACCC-AATGTGTA-CC--TA-CCTC-TGTTGCTTTGGCGG-G--CCGCGGTCCTCCGCACCGGCGCCT--CG-GGGGGGCTGGCCA-GCGC--CCGCCAGAGGACCATAAAACTCCAGTCAGTGAA-CTTCGCAGTCTGAAAAACAAGTT-AA-T-AAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCTGCTTGGTATTGGGCTCC-GTCCTCC-----ACGGACGCGCCTT--AAAGACC-------TCGGCGGTGGC--GTCTT--GC--CTC-AA-GCGTAGT-AG--AAA--ACACCTC---GCTT-TGGAGCGCAC-GGCGTCGCCCG-CCGGACGAACC-TT-TGAA-----------TTATTTCT--CAA-GGTTGACCTCGGATNNNNNNNNNNNN Mycosphaerella_citri_CBS116426 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC----------CTCCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---AACCT---GTTGCTTCGGGGGAG-ACCC-CG-CCGTTC--GCGGCGGCG------GCTCCCCC-GGA-GG---CCCA---TT-------AACACT-GCGTAACTGTT-TGTCGGAGTCT--TAA-------TAAATCAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCCC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGCCT---CGCCCGCGCGCCTT--AAAGTCTCT-----CCGGCTGGAC---CGT-TT-GT--CCCTAAAGCGTCGT-GCA--AA---CC---TC--GC-GGT-GGG-ATTT-GA-TGGG-----CC-----GGCCGTT--AAA------------TCTTT-AT-CAAAGGTTGACCTCGGATCAGGTANNNNNN Mycosphaerella_citri_CMW22517 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---AACCT---GTTGCTTCGGGGGAG-ACCC-CG-CCGTTC--GCGGCGGCG------GCTCCCCC-GGA-GG---CCCA---TT-------AACACT-GCGTAACTGTTTAGTCGGAGTCT--TAA-------TAAATCAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCCC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGCCT---CGCCCGCGCGCCTT--AAAGTCTCC-----CCGGCTGGAC---CGT-TT-GT--CCCTAAAGCGTCGT-GCA--AA---CC---TC--GC-GGT-GGG-ATTT-GA-TGGG-----CC-----GGCCGTT--AAA------------TCTTT-AT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_citri_CMW22518 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---AACCT---GTTGCTTCGGGGGAG-ACCC-CG-CCGTTC--GCGGCGGCG------GCTCCCCC-GGA-GG---CCCA---TT-------AACACT-GCGTAACTGTT-TGTCGGAGTCT--TAA-------TAAATCAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCCC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGCCT---CGCCCGCGCGCCTT--AAAGTCTCC-----CCGGCTGGAC---CGT-CT-GT--CCCTAAAGCGTCGT-GCA--AA---CC---TC--GC-GGT-GGG-ATTT-GA-TGGG-----CC-----GGCCGTT--AAA------------TCTTC-AT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_citri_CPC10522 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC----------CTCCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---AACCT---GTTGCTTCGGGGGAG-ACCC-CG-CCGTTC--GCGGCGGCG------GCTCCCCC-GGA-GG---CCCA---TT-------AACACT-GCGTAACTGTT-TGTCGGAGTCT--TAA-------TAAATCAAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCCC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGCCT---CGCCCGCGCGCCTT--AAAGTCTCC-----CCGGCTGGAC---CGT-TC-GT--CCCTAAAGCGTCGT-GCA--AA---CC---TC--GC-GGT-GGG-ATTT-GA-TGGG-----CC-----GGCCGTT--AAA------------TCTTT-AT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_colombiensis NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC-----------TCCGGGTCC-GACCTCC-AACCCT--TTGTGAA-CC---AATCT--TGTTGCTTCGGGGGCG-ACCC-TG-CCGCTT---CGGCGGTG----CGGCGCCCCC-GGA-GG----CCA---TC------AAACACT-GCATC--ATTG-CGTCGGAGT----AAAAG-----TAAATGAAA-CAAAACTTTCAACAACGGATCTCTTGGTTCCAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGT--------GCCGCGCGCCTT--AAAGTCTT------CCGGCTG-AG---CTGTCC-GT--CTCTAA-GCGTTGT-GGC--AA---CTA-TTC--GCTTCG-GAG-GCC--GG-GCGG-----CCGC---GGCCGTT--AAA------------TCTTTCAC---AAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_cryptica TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGC-----------GCCC-GCCC-GACCTCC-AACCCC--ATGTTTT-CC---AACCA--TGTTGCCTCGGGGGCG-ACCC-GG-CCG-CC----GT--GC-----CGGGGCCCCC-GGC-GG---ACCCC--TC-------AACTCT-GCATC--TTTG-CGTCTGAGT--GATAACGAA----AAATCAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTA-CACCCC-TCCAGCCTCGCTGGGTGTTGGGCATC-GCGGCC-------TCCGCGCGCCTC--AATGTCT-------CCGGCCG-AG---CCGACC-GT--CTCTAA-GCGTTGT-GGC-ACA-A-CTGTTTC--GCTTCC-GGG-ACC--GGTCCGG-----CGTCG-CG-CCGTC--AA--------CCCCCTCTCTCAC----AGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_eucalyptorum NNNNNNNNNNNNNNNNNNNAGGGATCATTACCGAGC-GAGGGT----------CTCTGGGCCC-GACCTCC-AACCCT-CTTGTGAA-C---CAACCT--CGTTGCTTCGGGGGCG-ACCC-CG-CCG-TT-CGCG-CGG----CG-GGTCCCCCC-GGG-GA---CCA----TT------AAACACT-GCGTAACTTAG-CGTCGGAGT-TT-GAA-TA-----AA-TCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CACCAA-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGGTC-----CCCGCGCGCCTT--AAAGTCTCT-----CCGGCTG-AG---CGGTCC-GT--CTCTAA-GCGTTGT-GGCAA-----CTA-TTC--GCGACG-GGA-CG---GG--CGG------CGC---GGCCGTT--AAA------------TCTT-CAC-TTAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_fijiensis TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GA-GGC-----------TCAC-GCCC-GACCTCC-AACCCT--TTGTGAA-CC-ACAA-CT--TGTTGCTTCGGGGGCG-ACC--TG-CCG-TC----GGCGG--------GCGCCCCCCGGA-GG---CCGT---CT------AAACACT-GCATC--TTTG-CGTCGGAGT-TT-AAAACA-----AA-TCGAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTAGCTTGGTATTGGGCGTC-GCGGTTCT------CCGCGCGCCTT--AAAGTCT-------CCGGCTG-AG---CTGTCC-GT--CTCTAA-GCGTTGT-GGATTTT--TCAA-TTC--GCTTCG-GAG-TGC--GG-GTGG-----CCGC---GGCCGTT--AAA------------TCTTT-ATTCAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_flexuosa NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC-----------TCC-GGCCC-AACCTCC-AACCCT--TTGTGAATTC--GA-CCTC-TGTTGCCTCGGGGGCG-ACCC-GG-CCCTCT--G-GGTGC------CGGGGCCCCC-GGC-GG---ACACC--TC-------AACTCT-GCATC--TTTG-CGTCTGAGT---ATGA-TA-TTTGAA-TCAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGAG-GCGGCTTCAC--GGCCGCCCGCCTC--AAAGTCT-------CCGGCTG-GA---CCGACC-GT--CTCTAA-GCGTTGT-GACTTAA--TTGGA-CC--GCTTGT-GAG-TAT--GG-GACGT----CCTC---GGCCGTT--AAA----------CTTATTACAC---AAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_fori TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC-----------TCAC-GCCC-GACCTCC-AACCCT--TTGTGAA-C--ACA-TCT--TGTTGCTTCGGGGGCG-ACCC-TG-CCG-GC-CCTG-CGTCG--CCGGGCGCCCCC-GGA-GG---TCT----CC------AAACACT-GCATC--TTTG-CGTCGGAGT-TT-AAA-CA-----AA-TTAAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGC--------TCCGCGCGCCTT--AAAGTCT-------CCGGCTG-AG---CCATTC-GT--CTCTAA-GCGTTGT-GGATTTT--TCAA-TTC--GCTTCG-GAG-TGC--GG-GTGG-----CCGC---GGCCGTT--AAA------------TCTTT-ATTCAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_lateralis TCCGTAGGTGAACCTGCGGAGGGATCATTACCAGAA-GACGCCTCGGCGGAAACGCCGGGGCC-TTCGTCC-AACCCT--TTGTGAA-CG--TA-TCTC-TATTGCCCCGGGGG-A-ACCC-CG-CCTGTC-ACGGGCGT-------GG-GCCCCC-GGC-GG----CCA-ACTC------AAACTCT-GTTTTT-ATTGCCGTCTGAGT-----AA-CAAA--CAAATCAAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCAA-TCCAGCCCCGCTGGGTATTGGGCGTC-GCGGCCT------GCCGCGCGCCTC--AAAGTCT-------ACGGCGG-AA---GCCGCCCGTTCCTCT---GCGTGAT-GAC-ACA--TC-GT--C--GCTTGG-GAC-ACG--GGGGTGAG----CG-C-----CCGGA--AAACATCGGCGGAGACGTCGATTTCAA-GGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_madeirae_CBS112895 NNNNNNNNNNNNNNNNNNNNGGGATCATTACCGAGT-GAGGGC-----------CCC-GGCCC-GACCTCC-AACCCT--TTGTGAA-----CA-CTTCTCGTTGCTTCGGGGGCG-ACCC-TG-CCGTCC---CGGCGC----C--GGCGCCCCC-GGA-GG---ACAC---CC-------AACACT-GCATC--CATG-CGTCGGAGT-----GA-TTTTGTAAA-TCAAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGCC-GCG--CACCG----CCGCGCGCCTC--AAAGTCC-------CCGGCTG-GG---CGGGCCCGT--CCCCGA-GCGTTGT-GA--TC---TCACAGTCTCGCTAGG-GAGTCGC--GT-CCGC-----CGGC---GGCCGTT--AAA-----------CACCCCCAT-CACAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_madeirae_CPC3746 NNNNNNNNNNNNNNNNNNNNNGGATCATTACCGAGT-GAGGGC----------CCCC-GGCCC-GACCTCC-AACCCT--TTGTGAA-----CA-CTTCTCGTTGCTTCGGGGGCG-ACCC-TG-CCGTCC---CGGCGC----CG--GCGCCCCC-GGA-GG---ACAC---CC-------AACACT-GCATC--CATG-CGTCGGAGT-----GA-TTTTGTAAA-TCAAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGCC-GCGC-ACC-G----CCGCGCGCCTC--AAAGTCC-------CCGGCTG-GG---CGGGCCCGT--CCCCGA-GCGTTGT-GA--TC---TCACAGTCTCGCTAGG-GAGTCGC--GT-CCGC-----CGGC---GGCCGTT--AAA-----------CACCCCCAT-CACAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_marasasii TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCC-AGTCC-GACCTCC-AACCCT--TTGTGAA-CC---AA-CAC-TGTTGCTTCGGGGGCG-ACCC-TG-CCTTTC--G-GGCAG-------TGCGCCCCC-GGA-GG---ATA----TC-----AAAACGCT-GCATC--TTTG-CGTCGGAGT----ATC---AATCAAA-TT-GAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGGAACGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGG-CTC-------CGCGCGCCTC--AAAGTCT-------CCGGCTG-GA---GCTGTCCGT--CTCCGA-GCGTTGT-GAA-TC---TCAT--TCGCGCTAGG-GAGTCGC--GG-GCAC-----ACGC---GGCCGTT--AAA-----------TACCC-CAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_marksii_CMW22520 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGC-----------TCC-GGCCC-GACCTCC-AACCCT--TTGTGAA-TC-A-AACCT---GTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCG-----CG--GCGCCCCC-GGG-GG---A-AA---TC------AAACACT-GCGTCAATTTG-TGTCGGAGT----ACC-TG-TT--AA-TAAA--CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGCC-GCG--TTT---CGA-TGCGCGCCTT--AAAGTTT-------CCGGCTG-GA---CCGTCC-GT--CTCCGA-GCGTTGT-GGCAT-----CTGTCTC--GCTAGG-GAGCCGC--GG-AGGG-----CGTT---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGNNNNNNNN Mycosphaerella_marksii_CMW22529 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGT-----------TTC-GGCCC-GACCTCC-AACCCT--TTGTGAA-TC-A-AACCT---GTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCG-----CG--GCGCCCCC-GGG-GG---A-AA---TC------AAACACT-GCGTCAATTTG-TGTCGGAGT----ACT-TG-TT--AA-TAAA--CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGTC-GCG--TTT---CGA-TGCGCGCCTT--AAAGTTT-------CCGGCTG-GA---CCGTCC-GT--CTCCGA-GCGTTGT-GGCAT-----CTGTCTC--GCTAGG-GAGCCGC--GG-AGGG-----CGTT---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGNNNNNNNN Mycosphaerella_marksii_CMW22530 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGT-----------TTC-GGCCC-GACCTCC-AACCCT--TTGTGAA-TC-A-AACCT---GTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCG-----CG--GCGCCCCC-GGG-GG---A-AA---TC------AAACACT-GCGTCAATTTG-TGTCGGAGT----ACT-TG-TT--AA-TAAA--CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGTC-GCG--TTT---CGA-TGCGCGCCTT--AAAGTTT-------CCGGCTG-GA---CCGTCC-GT--CTCCGA-GCGTTGT-GGCAT-----CTGTCTC--GCTAGG-GAGCCGC--GG-AGGG-----CGTT---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGNNNNNNNN Mycosphaerella_marksii_CMW22531 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGT-----------TTC-GGCCC-GACCTCC-AACCCT--TTGTGAA-TC-A-AACCT---GTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCG-----CG--GCGCCCCC-GGG-GG---A-AA---TC------AAACACT-GCGTCAATTTG-TGTCGGAGT----ACT-TG-TT--AA-TAAA--CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGTC-GCG--TTT---CGA-TGCGCGCCTT--AAAGTTT-------CCGGCTG-GA---CCGTCC-GT--CTCCGA-GCGTTGT-GGCAT-----CTGTCTC--GCTAGG-GAGCCGC--GG-AGGG-----CGTT---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGNNNNNNNN Mycosphaerella_marksii_CMW9091 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGT-----------TTC-GGCCC-GACCTCC-AACCCT--TTGTGAA-TC-A-AACCT---GTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCG-----CG--GCGCCCCC-GGG-GG---A-AA---TC------AAACACT-GCGTCAATTTG-TGTCGGAGT----ACT-TG-TT--AA-TAAA--CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGTC-GCG--TTT---CGA-TGCGCGCCTT--AAAGTTT-------CCGGCTG-GA---CCGTCC-GT--CTCCGA-GCGTTGT-GGCAT-----CTGTCTC--GCTAGG-GAGCCGC--GG-AGGG-----CGTT---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_marksii_CMW9092 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGT-----------TTC-GGCCC-GACCTCC-AACCCT--TTGTGAA-TC-A-AACCT---GTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCG-----CG--GCGCCCCC-GGG-GG---A-AA---TC------AAACACT-GCGTCAATTTG-TGTCGGAGT----ACT-TG-TT--AA-TAAA--CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGTC-GCG--TTT---CGA-TGCGCGCCTT--AAAGTTT-------CCGGCTG-GA---CCGTCC-GT--CTCCGA-GCGTTGT-GGCAT-----CTGTCTC--GCTAGG-GAGCCGC--GG-AGGG-----CGTT---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_obscurus_CBS119973 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CCTCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---A-CCTC-TGTTGCCTCGGGGGCG-ACCC-CG-CCGTTC--GCG-CGGCGG-CG--GCGCCCCC-GGC-GG---CCAAA--TC------AAAACCTCGCGTAACTTTAGTGTCGGAGTCT--TAA----TT-GAA-TAAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGCC-GCGGGACT-----CCCGCGCGCCTC--AAAGTCTTCTTTTTCCGGCTG-AG---CGACCC-GT--CTCCAA-GCGTTGT-GGC--AA---CTA-TTC--GC-GGC-GAG-ATC--GG-GGGG-----CGGC---GGCCGTT--AAA----------TCA-TTTCATTCA--GGT-GACCTCGGATNNNNNNNNNNNN Mycosphaerella_obscurus_CMW23439 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---A-CCTC-TGTTGCTTCGGGGGCG-ACCC-CG-CCGTTC--GCG-CGGCGG-CG--GCGCCCCC-GGT-GG---CCAAA--TC------AAAACCTCGCGTAACTTTAGTGTCGGAGTCT--TAA----TT-GAA-TAAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGCC-GCGGGACT-----CCCGCGCGCCTC--AAAGTCTTTATTT-CCGGCTG-AG---CGACCC-GT--CTCTAA-GCGTTGT-GGC--AA---CTA-TTC--GC-GGC-GAG-ATC--GG-GGGG-----CGGC---GGCCGTT--AAA----------TCA-TTTCATTCA--GGTTGACCTCGGATCAGGTANNNNNN Mycosphaerella_parkii TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGT----------TTCACCG-CC-GACCTCC-AACCCT--TTGTGAA-CC-ACAA-CT--TGTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCAT----CG---CGCCCCC-GGA-GG---ATA----CT------TAACCCT-GCATC--ATTG-CGTCGGAGT----AATTTTATT--AA-TACA-T-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGTC-GCGGCTTC---CGCC-GCGCGCCTC--AAAGTCT-------CCGGCTG-GG---CAGCCC-GT--CTCCGA-GCGTTGT-GGCATCA-C-AGTTCTC--GCTAGG-GAGTCGC--GG-ACGG-----CGTC---GGCCGTT--AAA-----------TACCC-CAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_sp._CMW22515 TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGT-GAGGGC-----------CCCCGGCCC-GACCTCC-AACCCC--ATGTTTT-CC---AACCTC-TGTTGCCTCGGGGGCG-ACCC-GG-CCC------CGGCGGG-------GCCCCCCGCGGA-----CCTCAA--CC------AAACCCT-GCATA--TCTG-CGTCTGAGT---CAATTGA----TAAATTCAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGTGGCATTCCGCCGGGCATGCCTGTTCGAGCGTCATTA-CACCAC-TCCAGCCTGGCTGGGTATTGGGCGTC-GCGGGGT-----CCCCGCGCGCCTC--GAAGTCT-------CCGGCCG-AG---CCGTCC-GT--CTCTAA-GCGTTGT-G-ATCTA--TCAA-GCC--GCTTGC-GAGCTCG--GG-G-GG-----CCGT-CGCGCCGTT--AAA------------CGACC-ATCTCAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_sp._CMW22516 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCCGGGTCC-GACCTCC-AACCCT-TTTGTGAA-CC---AACCT---GTTGCTTCGGGGGAG-ACCC-CG-CCGTTC----G-CGGCGG-CG--GCTCCCCC-GGA-GG---CCCA---TT-------AACACT-GCGTAACTTTAGTGTCGGAGTCT--TAA----TT-GAA-TAAA-TCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGCC-GCGGGACT-----CCCGCGCGCCTC--AAAGTCTTCTTTTTCCGGCTG-AG---CGACCC-GT--CTCCAA-GCGTTGT-GGC--AA---CTA-TTC--GC-GGC-GAG-ATC--GG-GGGG-----CGGC---GGCCGTT--AAA----------TCA-TTTCATTCA--GGT-GACCTCGGATNNNNNNNNNNNN Mycosphaerella_sp._CMW22519 TCCGTAGGTGAACCTGCGGAGGGATCATTAACGAGT-GAGGGC-----------TCC-GGCCC-GACCTCC-AACCCT--TTGTGAA-CC---AACCT--CGTTGCTTCGGGGGCG-ACCC-CG-CCGTTC--GCG-CGGTCGGCG--GCGCCCCC-GGA-GG----CCA---TC------AAACACT-GCGTAATTTTG-CGTCGGAGTTT--AAATCA-----AA-TTAAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTA-CACCAC-TCAAGCCTGGCTTGGTATTGGGTGCC-GCGGGCC-----TCCCGCGCGCCTC--AAAGTCTCT-----CCGGCTG-AG---CGGCTC-GT--CTCTAA-GCGTTGT-GGC--AA---CTA-TTC--GC-GGT-GAG-AGG--GG-GCGG-----C-GC---GGCCGTT--AAA------------CTTTTC-TT-AAAGGTTGACCTCGGATCAGGTAGGNNNN Mycosphaerella_sumatrensis_CPC11171 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC-----------TGT-GGCCC-GACCTCC-AACCCC--ATGTGAA-CCGA-AACC---TGTTGCTTCGGGGGCG-ACCC-TG-CC-TTC--GC-GC------GA-GGCGCCCCC-GGA-GG---CTCA---TC------AAACCCT-GCATC--TTTG-CGTCGGAGTCT--CAA-TG-----AATTTAAA-CAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTCGCTTGGTATTGGGTGCC-GCGG-CCTCGC---CCGCGCGCCTC--GAAATCT-------CCGGCTG-AG---CCGTCC-GT--CTCCCC-GCGTTGT-GACTTTA--TTGTT-TC--GCTGCG-GAG-CAC--GG-GCGACTT--CG-----G-CCGTT--AAA------------TCTC--AT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_sumatrensis_CPC11178 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC-----------TCC-GGCCC-GACCTCC-AACCCC--ATGTGAA-CCGA-AACC---TGTTGCTTCGGGGGCG-ACCC-TG-CC-TTC--GC-GC------GA-GGCGCCCCC-GGA-GG---CTCA---TC------AAACCCT-GCATC--TTTG-CGTCGGAGTCT--CAA-TG-----AATTTAAA-CAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTCGCTTGGTATTGGGTGCC-GCGG-CCTCGC---CCGCGCGCCTC--GAAATCT-------CCGGCTG-AG---CCGTCC-GT--CTCCCC-GCGTTGT-GACTTTA--TTGTT-TC--GCTGCG-GAG-CAC--GG-GCGACTT--CG-----G-CCGTT--AAA------------TCTC--AT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_verrucosiafricana_CPC11167 NNNNNNNNNNNNNNNNNNNAGGGATCATTACCGAGT-GCGCGC---------CCCCCGGGGCC-GACCTCC-AACCCA--TTGTTAT-C---CGA-CCA-CGTTGCCTCGGGGGCG-ACCC-GG-CCG-TT------TGGC---CCCGGGGCCCCC-GGT-GGAAATCC---ATCA-----AAACCCT-GCATC--TCTGGCGTCTGAGT-AG-AAATTG-----AA-TCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CACCAC-TCAAGCCTCGCTTGGTATTGGGGGCC-GCGGGA-----GA-CCGCGCCCCTT--AAAGTCA-------CCGGCTG-GA---CCGTCC-GT--CTCTAC-GCGTTGT-GGCAA-----CTA-TCC--GCGAGC-GAG-ACC--GG-GCGA-----CC-C---GGCCGTT--AAA------------CCCCC-AT-CATAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_verrucosiafricana_CPC11170 NNNNNNNNNNNNNNNNNNNAGGGATCATTACCGAGT-GCGCGC---------CCCCCGGGGCC-GACCTCC-AACCCA--TTGTTAT-C---CGA-CCA-CGTTGCCTCGGGGGCG-ACCC-GG-CCG-TT------TGGC---CCCGGGGCCCCC-GGT-GGAAACCC---ATCA-----AAACCCT-GCCTC--TCTGGCGTCTGAGT-AG-AAATTG-----AA-TCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CACCAC-TCAAGCCTCGCTTGGTATTGGGGGCC-GCGGGA-----GA-CCGCGCCCCTT--AAAGTCA-------CCGGCTG-GA---CCGTCC-GT--CTCTAC-GCGTTGT-GGCAA-----CTA-TCC--GCGAGC-GAG-ACC--GG-GCGA-----CC-C---GGCCGTT--AAA------------CCCCC-AT-TATAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_vietnamensis_CBS119974 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGT----------TTCACCGCCC-GACCTCC-AACCCT--TTGTGAA-CC-ACAA-CT--TGTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCAT----CG---CGCCCCC-GGA-GG---ATA----CT------TAACCCT-GCATC--ATTG-CGTCGGAGT----ATTTTTATT--AA-TAAA-T-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGCC-GCGG-TTTAATCGCC-GCGCGCCTC--AAAGTCT-------CCGGCTG-GG---CAGCCC-GT--CTCCGA-GCGTTGT-GGCATCA-C-AGTTCTC--GCTAGG-GAGTCGC--GG-GCGG-----CGTC---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_vietnamensis_CMW23442 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGT----------TTCACCGCCC-GACCTCC-AACCCT--TTGTGAA-CC-ACAA-CT--TGTTGCTTCGGGGGCG-ACCC-TG-CCGTTC--GCGGCAT----CG---CGCCCCC-GGA-GG---ATA----CT------TAACCCT-GCATC--ATTG-CGTCGGAGT----ATTTTTATT--AA-TAAA-T-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCGAGTCTGACTCGGTATTGGGCGCC-GCGG-TTTAATCGCC-GCGCGCCTC--AAAGTCT-------CCGGCTG-GG---CAGCCC-GT--CTCCGA-GCGTTGT-GGCATCA-C-AGTTCTC--GCTAGG-GAGTCGC--GG-GCGG-----CGTC---GGCCGTT--AAA-----------CACCC-CAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_yunnanensis_CBS119975 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCCG-GTCC-GACCTCC-AACCCT--TTGTGAA-CC---AACAC--TGTTGCTTCGGGGGCG-ACCC-TG-CCTTTC--G-GGCAGT-------GCGCCCCC-GGA-GG---ATA----TC------AAAACGCTGCATC--TTTG-CGTCGGAGT-AT-CAATC------AAATTGAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGAG--------TCCGCGCGCCTC--AAAGTCT-------CCGGCTG-AG---CTGTCC-GT--CTCCCA-GCGTTGT-GAATC----TCA--TTC--GCTACG-GAG-TCT-CGG-GCAG-----CCGC---GGCCGTT--AAA--------------CTT-ATCTAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_yunnanensis_CBS119976 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGC-GAGGGC----------CTCCG-GTCC-GACCTCC-TACCCT--TTGTGAA-CC---AACAC--TGTTGCTTCGGGGGCG-ACCC-TG-CCTTTC--G-GGCAGT-------GCGCCCCC-GGA-GG---GAA----TC------AAAACGCTGCATC--TTTG-CGTCGGAGT-AT-CAATC------AAATTGAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGAG--------TTCGCGCGCCTC--AAAGTCT-------CCGGCTG-AG---CTGTCC-GT--CTCCCA-GCGTTGT-GAATC----TCA--TTC--GCTACG-GAG-TTTACGA-GCAG-----CCGC---GGCCGTT--AAA--------------CTT-ATCTAAAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_yunnanensis_CMW23445 TCCGTAGGTGAACCTGCGGAGGGATCATTACTGAGT-GAGGGC----------CTCCG-GTCC-GACCTCC-AACCCT--TTGTGAA-CC---AACAC--TGTTGCTTCGGGGGCG-ACCC-TG-CCTTTC--G-GGCAGT-------GCGCCCCC-GGA-GG---ATA----TC------AAAACGCTGCATC--TTTG-CGTCGGAGT-AT-CAATC------AAATTGAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTT-CACCAC-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGAG--------TCCGCGCGCCTC--AAAGTCT-------CCGGCTG-AG---CTGTCC-GT--CTCCCA-GCGTTGT-GAATC----TCA--TTC--GCTACG-GAG-TCT-CGG-GCAG-----CCGC---GGCCGTT--AAA--------------CTT-ATCTAAAGGTTGACCTCGGATCAGGTAGGGATA Stenella_pseudoparkii_CBS110988 NNNNNNNNNNNNNNNNNNNAGGGATCATTACCGAGT-GAGGGT---------CTTCA-GACCC-GACCTCC-AACCCT-TTTGTGAA-C---CAACCT--CGTTGCTTTGGGGGCG-ACCC-CG-CCG-TT---TG-TG-----CG-GGGGCCCCC-GGG-GA---CCA----TT------AAACACT-GCGTAACTTAG-CGTCGGAGT-TT-GAA-TA-----AA-TCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CACCAA-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGGCC-----CCCGCGTGCCTT--AAAGTCTCT-----CCGGCTG-AG---CGGCTC-GT--CTCTAA-GCGTTGT-GGCAA-----CTA-TTC--GCGACG-GGA-TG---GG--CGG------TGC---GGCCGTT--AAA------------TCTTT-ATTCAA-GGTTGACCTCGGATCAGGTAGGGATA Stenella_pseudoparkii_CBS110999 NNNNNNNNNNNNNNNNNNNAGGGATCATTACCGAGT-GAGGGT---------CTTCA-GACCC-GACCTCC-AACCCT-TTTGTGAA-C---CAACCT--CGTTGCTTCGGGGGCG-ACCC-CG-CCG-TT---TG-TG-----CG-GGGGCCCCC-GGG-GA---CCA----TT------AAACACT-GCGTAACTTAG-CGTCGGAGT-TT-GAA-TA-----AA-TCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CACCAA-TCAAGCCTGGCTTGGTATTGGGCGTC-GCGGGGCC-----CCCGCGTGCCTT--AAAGTCTCT-----CCGGCTG-AG---CGGCTC-GT--CTCTAA-GCGTTGT-GGCAA-----CTA-TTC--GCGACG-GGA-TG---GG--CGG------TGC---GGCCGTT--AAA------------TCTTT-ATTCAA-GGTTGACCTCGGATCAGGTAGGGATA Stenella_sp._CPC11671 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGC----------CCCCGGGTCC-GACCTCC-AACCCT-TCTGTGAA-C---CA-CCT--CGTTGCTTTGGGGGCG-ACCC-CG-CCG-TT---CG-CGG----CGCGGGGCCCCC-GGA-GC---CCA----TC------AAACCCT-GCGTAACCACGTCGTCGGAGT-TT-AAA-CA-----AA-TCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCGGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCAA-TCGAGCCTGGCTCGGTGTTGGGCGTC-GCGGGTCTCCGGACCCGCGCGCCTC--AAAGTCTCA-----CCGGCTG-AG---CGGCGTCGT--CTCTAA-GCGTTGT-GGAAA-----CTA-TTC--GCAGAG-GGA-CG---GG-GCGG------TGC---GGCCGTT--AAA------------CACCCCAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Stenella_xenoparkii_CBS111088 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGT----------CTCCGGGCCC-GACCTCC-AACCCT-TTTGTGAA-C---CA-CCT--CGTTGCTTCGGGGGCG-ACCC-TG-CCG-TT---CG-CGG----CGTGGGGCCCCC-GGA-GC---CCA----TC------AAACCCT-GCGTAATCAAGTCGTCGGAGT-TT-AAAACA-----AA-TAAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCGGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCAA-TCAAGCCTGGCTTGGTATTGGGCAGC-GCGGGTCCTT-GACCCGCGCGCCTT--AAAGTCTCA-----CCGGCTG-AG---CGGCGTCGT--CTCTAA-GCGTTGT-GGAAA-----CTA-TTC--GCAAAG-GGA-CG---GG-GCGG------CGT---GGCCGTT--AAA------------TACCCCAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA Stenella_xenoparkii_CBS111185 NNNNNNNNNNNNNNNNNNNAGGGATCATTACTGAGT-GAGGGT----------CTCCGGGCCC-GACCTCC-AACCCT-TTTGTGAA-C---CA-CCT--CGTTGCTTCGGGGGCG-ACCC-TG-CCG-TT---CG-CGG----CGTGGGGCCCCC-GGA-GC---CCA----TC------AAACCCT-GCGTAATCAAGTCGTCGGAGT-TT-AAAACA-----AA-TAAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCGGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTA-CACCAA-TCAAGCCTGGCTTGGTATTGGGCAGC-GCGGGTCCTT-GACCCGCGCGCCTT--AAAGTCTCA-----CCGGCTG-AT---CGGCGTCGT--CTCTAA-GCGTTGT-GGAAA-----CTA-TTC--GCAAAG-GGA-CG---GG-GCGG------CGT---GGCCGTT--AAA------------TACCCCAT-CAAAGGTTGACCTCGGATCAGGTAGGGATA ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Citri_Clade) = N: 1-626; CODONPOSSET CodonPositions (CHARACTERS = Citri_Clade) = N: 1-626; END; [ The following blocks are output data for analysis step 3370 ] BEGIN TREES; TITLE Tb8143; LINK TAXA = TaxaForAnalysisStep3370; TREE Fig._2 = [&R] (Botryosphaeria_ribis,(((((((((Mycosphaerella_marasasii,(Mycosphaerella_madeirae_CBS112895,Mycosphaerella_madeirae_CPC3746)),(((Mycosphaerella_marksii_CMW9091,Mycosphaerella_marksii_CMW9092,Mycosphaerella_marksii_CMW22529,Mycosphaerella_marksii_CMW22530,Mycosphaerella_marksii_CMW22531),Mycosphaerella_marksii_CMW22520),(Mycosphaerella_parkii,(Mycosphaerella_vietnamensis_CBS119974,Mycosphaerella_vietnamensis_CMW23442)))),(Mycosphaerella_sumatrensis_CPC11171,Mycosphaerella_sumatrensis_CPC11178)),((Mycosphaerella_yunnanensis_CBS119975,Mycosphaerella_yunnanensis_CMW23445),Mycosphaerella_yunnanensis_CBS119976)),(Mycosphaerella_sp._CMW22515,(Mycosphaerella_verrucosiafricana_CPC11167,Mycosphaerella_verrucosiafricana_CPC11170))),(Mycosphaerella_fijiensis,Mycosphaerella_fori)),((Mycosphaerella_flexuosa,Mycosphaerella_cryptica),Mycosphaerella_colombiensis)),(((((Mycosphaerella_citri_CBS116426,Mycosphaerella_citri_CPC10522,Mycosphaerella_citri_CMW22517),Mycosphaerella_citri_CMW22518),(Mycosphaerella_sp._CMW22516,(Mycosphaerella_obscurus_CBS119973,Mycosphaerella_obscurus_CMW23439))),Mycosphaerella_sp._CMW22519),(((Stenella_pseudoparkii_CBS110999,Stenella_pseudoparkii_CBS110988),Mycosphaerella_eucalyptorum),((Stenella_xenoparkii_CBS111088,Stenella_xenoparkii_CBS111185),Stenella_sp._CPC11671)))),Mycosphaerella_lateralis)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2645] END;