#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on November 13, 2026; 5:20 GMT

TreeBASE (cc) 1994-2008

Study reference:
Reeleder R. 2007. Rhexocercosporidium panacis sp. nov., a new anamorphic species
causing rusted root of ginseng (Panax quinquefolius). Mycologia, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1786]

[ The following blocks are input data for analysis step 3577 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep3577;
        DIMENSIONS NTAX=10;
        TAXLABELS
            Euascomycete_OOO15
            Euascomycete_OOO36
            Phialophora_gregata_98G13
            Rhexocercosporidium_carotae_DAOM226960
            Rhexocercosporidium_carotae_PRI784
            Rhexocercosporidium_carotae_PRI787
            Rhexocercosporidium_panacis_DAOM235603
            Rhexocercosporidium_panacis_DAOM235604
            Rhexocercosporidium_panacis_DAOM235605
            Rhexocercosporidium_panacis_RRD3
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1850]

	TITLE beta_Tubulin;
	LINK TAXA = TaxaForAnalysisStep3577;
	DIMENSIONS NCHAR=202;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                  10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200  ]
[                                                   .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .  ]
Euascomycete_OOO15                         TTTTCAGCCGTGGTAAGGTTTCTATGAAGGAGGTCGAGGATCAAATGCGCAACGTTCAGAACAAGAACTCATCCTACTTCGTTGAGTGGATCCCCAACAACGTCCAAACCGCCCTTTGCTCCATCCCACCACGTGGTCTCAAGATGTCCTCCACCTTTGTCGGTAACTCCACCTCCATCCAAGAGCTCTTCAAGCGTATCGG
Euascomycete_OOO36                         TTTTCAGCCGTGGTAAGGTTTCTATGAAGGAGGTCGAGGATCAAATGCGCAACGTCCAGAACAAGAACTCATCCTACTTCGTTGAGTGGATCCCCAACAACGTCCAAACCGCCCTTTGCTCCATCCCACCACGTGGTCTCAAGATGTCCTCCACCTTTGTCGGTAACTCCACCTCCATCCAAGAGCTCTTCAAGCGTATCGG
Phialophora_gregata_98G13                  TTTCTAGCCGTGGTAAGGTTTCCATGAAAGAGGTTGAGGATCAAATGCGCAATGTCCAGAACAAGAACTCCTCCTACTTCGTCGAGTGGATCCCCAATAACGTCCAAACCGCCCTCTGCTCTATCCCTCCACGTGGTCTTAAGATGTCTTCCACATTCGTTGGTAACTCCACCTCTATCCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_carotae_DAOM226960     TCTCTAGCCGTGGTAAAGTCTCCATGAAGGAGGTCGAGGATCAGATGCGCAATGTCCAGAACAAGAACTCGTCGTACTTCGTTGAGTGGATTCCCAACAACGTCCAAACCGCCCTTTGCTCCATCCCACCACGTGGTCTCAAGATGTCCTCCACCTTCGTCGGTAACTCCACCTCCATCCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_carotae_PRI784         TCTCTAGCCGTGGTAAAGTCTCCATGAAGGAGGTCGAGGATCAGATGCGCAATGTCCAGAACAAGAACTCGTCGTACTTCGTTGAGTGGATTCCCAACAACGTCCAAACCGCCCTTTGCTCCATCCCACCACGTGGTCTCAAGATGTCCTCCACCTTCGTCGGTAACTCCACCTCCATCCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_carotae_PRI787         TCTCTAGCCGTGGTAAAGTCTCCATGAAGGAGGTCGAGGATCAGATGCGCAATGTCCAGAACAAGAACTCGTCGTACTTCGTTGAGTGGATTCCCAACAACGTCCAAACCGCCCTTTGCTCCATCCCACCACGTGGTCTCAAGATGTCCTCCACCTTCGTCGGTAACTCCACCTCCATCCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_panacis_DAOM235603     CTTTTAGCCGTGGTAAGGTCTCCATGAAGGAGGTCGAGGATCAAATGCGCAATGTCCAGAACAAGAACTCCTCGTACTTCGTTGAGTGGATCCCCAACAACGTCCAAACTGCCCTTTGCTCCATTCCACCACGTGGTCTCAAGATGTCCTCTACCTTCGTCGGTAACTCTACCTCCATTCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_panacis_DAOM235604     CTTTTAGCCGTGGTAAGGTCTCCATGAAGGAGGTCGAGGATCAAATGCGCAATGTCCAGAACAAGAACTCCTCGTACTTCGTTGAGTGGATCCCCAACAACGTCCAAACTGCCCTTTGCTCCATTCCACCACGTGGTCTCAAGATGTCCTCTACCTTCGTCGGTAACTCTACCTCCATTCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_panacis_DAOM235605     CTTTTAGCCGTGGTAAGGTCTCCATGAAGGAGGTCGAGGATCAAATGCGCAATGTCCAGAACAAGAACTCCTCGTACTTCGTTGAGTGGATCCCCAACAACGTCCAAACTGCCCTTTGCTCCATTCCACCACGTGGTCTCAAGATGTCCTCTACCTTCGTCGGTAACTCTACCTCCATTCAGGAGCTCTTCAAGCGTATCGG
Rhexocercosporidium_panacis_RRD3           CTTTTAGCCGTGGTAAGGTCTCCATGAAGGAGGTCGAGGATCAAATGCGCAATGTCCAGAACAAGAACTCCTCGTACTTCGTTGAGTGGATCCCCAACAACGTCCAAACTGCCCTTTGCTCCATTCCACCACGTGGTCTCAAGATGTCCTCTACCTTCGTCGGTAACTCTACCTCCATTCAGGAGCTCTTCAAGCGTATCGG
;
END;

[ The following blocks are output data for analysis step 3577 ]
BEGIN TREES;
      TITLE Tb8350;
      LINK TAXA = TaxaForAnalysisStep3577;
      TREE Pars_Tub_1 = [&R] (Phialophora_gregata_98G13,((Euascomycete_OOO15,Euascomycete_OOO36),((Rhexocercosporidium_panacis_DAOM235604,(Rhexocercosporidium_panacis_DAOM235603,(Rhexocercosporidium_panacis_DAOM235605,Rhexocercosporidium_panacis_RRD3))),((Rhexocercosporidium_carotae_DAOM226960,Rhexocercosporidium_carotae_PRI784),Rhexocercosporidium_carotae_PRI787))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4808]


END;
BEGIN TREES;
      TITLE Tb8350;
      LINK TAXA = TaxaForAnalysisStep3577;
      TREE Pars_Tub_2 = [&R] (Phialophora_gregata_98G13,((Euascomycete_OOO15,Euascomycete_OOO36),((Rhexocercosporidium_panacis_DAOM235604,Rhexocercosporidium_panacis_DAOM235603,Rhexocercosporidium_panacis_DAOM235605,Rhexocercosporidium_panacis_RRD3)R._panacis,(Rhexocercosporidium_carotae_DAOM226960,Rhexocercosporidium_carotae_PRI784,Rhexocercosporidium_carotae_PRI787)R._carotae)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4809]


END;