#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 20, 2025; 2:27 GMT TreeBASE (cc) 1994-2008 Study reference: Mouly A., Razafimandimbison S., Achille F., Haevermans T., & Bremer B. 2007. Phylogenetic placement of Rhopalobrachium fragrans (Rubiaceae): evidence from molecular (rps16 and trnT-F) and morphological data. Systematic Botany, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1793] [ The following blocks are input data for analysis step 3597 ] BEGIN TAXA; TITLE TaxaForAnalysisStep3597; DIMENSIONS NTAX=37; TAXLABELS Alberta_minor Atractocarpus_stipularis Augusta_austrocaledonica Aulacocalyx_jasminiflora Bertiera_aethiopica Chiococca_alba Coffea_arabica Condaminea_corymbosa Cremaspora_triflora Cyclophyllum_deplanchei Fernelia_buxifolia Gardenia_hansemannii Guettarda_crispiflora Ixora_coccinea Ixora_ferrea Ixora_finlaysoniana Ixora_killipii Keetia_gueinzii Luculia_gratissima Mussaenda_scratchleyi Nematostylis_anthophylla Paragenipa_lancifolia Pavetta_platyclada Peponidium_comorense Psydrax_livida Psydrax_odorata Pyrostria_hystrix Randia_schumanniana Retiniphyllum_pilosum Rhopalobrachium_fragrans Sabicea_aspera Sabicea_mollis Sipanea_biflora Tarenna_borbonica Tarenna_buruensis Tricalysia_cryptocalyx Vangueria_madagascariensis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1865] TITLE Ixoroideae_rps16_matrix; LINK TAXA = TaxaForAnalysisStep3597; DIMENSIONS NCHAR=1011; FORMAT DATATYPE=Standard SYMBOLS= "A C G T 0 1 2 3 4" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Alberta_minor ------------------------------TATATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGTGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCGTTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAAAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAA-------------------AACTTAAACCATAGTCTAATTGATTTGATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1011100000111?000 Atractocarpus_stipularis ----------------------------ATTATATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCCTTGATA-----------------GAAGGAAATTCC---AAAA----GGGGTATGTTGCTGCCATTTTGAACGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----GATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----CTTTT-CAGGAATGAAAACAGAGAAAAAAAA----------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTCTTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGT-------------------------------------------------------------10111000001111000 Augusta_austrocaledonica --------------------------------------------------------------AAAGTGCTCGTGGCTCGACATCATTTGGTAATGTAAATAAAATAGTGCAGGATAGAGCTCGAGTAGAAAGTATTAATTTATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCGTTCGAGGAAGTTTCCCATTCAAAAGTAAAAT------TGGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCG----------TTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTTCCTAACAATTTTCTTTTGAGCTGTTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGG{GT}TTCTTTTTT----TTTTT-CAGGAATGAAAAA-GAAAAAAAAAAA---------------GACTTAAACCATAGTCTAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAA----------------------------------------------------------------------------------------------------------------------1011100000111?000 Aulacocalyx_jasminiflora -------------------------------------------------------------------GCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTAAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCCTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAAAAAA---------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGG-------------------------------------------------10111000001111000 Bertiera_aethiopica ------------------------------------CACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGTTCGACATCATTTGGTAATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTAGTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAAAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA----GGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAAGGGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACTCTT-----TTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGAATTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAAAAAA---------------GACTTAAACCGCAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGG------------------------------------------------------10110000001111000 Chiococca_alba --------------GTTGTGGAGTCTTTATTATATCCGCCATTTT------CTATAGGAATGAAGGTGCTCTTGACTCGACATCATTTGGTAATGGAAAT-----AGTCCATGATGGAGCTCGAGTAGAAAGTATTAATTGATTTCTTGGAGCAAGAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGT---AAT----ATATCTTCGATATAAAA--------GATCCCATTCGAGCAAGTTTCCCATTCAAAAGGCTAAT------TTGTTGGAATT--AATCAAACTTTTTCGATTCAAAGTGTATCACGCGGGAAT--CAATCCTTCGTAAGATTCTTTGATA-----------------GAAGGAAAT-CC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCCAGACC-----AAGGAAACACCCTTTTAATTGT----------G--------GGCCTGACTTAAGGA--TCAAAATATATATATT------TTTTTAAACGAGACAAA------------TAG-GGGGGTAAAGACCACTCAATAAATGAAATTGTCTAACGATTTTCTT----------------------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATAATTTCTTTTTT----CTTTTTCGTTCCTGAAAAA-GAAAAAA--------------------GACTTAAATAACAGTCTAATTGATTTGATGATTTTAT------GGACCC-----TTTTGT-CATTTATT--------AGAATTCCATACATAGATAAAACTTCGAATCAAATTCTTTTTT-CTCGAGCCGTACGAGGAGAAAACCTCTTATACGTTTCTAGGAGGGGTATTGTTCATCTACATCTATCTCAATG----------------------00001000000110000 Coffea_arabica -----------------GTGGATTCTTTATTATATCCACCATTTTCCATTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCATTTGGTAATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCTATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA----GGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATGTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCCTTTTTT---TTTTT-CAGGAATGAAAAGGAAAAAAA--------------------GACTTAAACCGCAGTCTAATTGATTTGATGATTTTAT------GCACC------TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCCAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATTTACATCTATCTCAATG----------------------10110000001111000 Condaminea_corymbosa --------------ATTGTGGATTCTTTATTATATCCACCATTTTCTATTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCATTTGGTAATGGAAAT-----AGTCCAGGATGGAGCTCGAGTAGAAAGTATTAATTTATTTCTCGGAACAAGAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTG--AAT----ATAGCTTCGATATAAAAATCGAAAGGATCCCATTCAAGCGAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGAATT--AATCAAACTTTTTCGACCAAAAGTGTATCACGCGGGAAT--CAATTGTCCGTAAGATTCTTTGATA-----------------GAAGGAAAT-CC---AAAAAA--GGGGTATGTTGCTGCCATTTTTAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCCAGAAC-----AAGGAAACACCATTTTAATTGTGTCAATAACTG--------AGCCCGACTTAAG--------ATAAGAAATCCA-----AATTTTAAACGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAATGATTTTTCTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----ATTTT-CAGGAACGAAAAA-GAAAAAAA-------------------GACTTAAATCATAGTCTAATTGATTTGATGATTTTAT------GTACCC-----TTTTGT-GATTTATT--------AGAATTCCATACATAGATAAAACTTCGAATCAAATTCTTTTTT-CTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATCTATATCTATCTCAATG----------------------00101000001110000 Cremaspora_triflora ----------------------------ATTATATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTGATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTTGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGAAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGAACCAAAGTGTATCGCGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAATTGTCTAAACCCAACGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAAAGGGGGTAAAGACCACTCAATAAGTGAAATTTCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAACAGAAAAAAA-------------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGT-------------------------------------------------------------10111000001110000 Cyclophyllum_deplanchei ----------------------------------------------------------------------------------------------------------GTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AATCAATCTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAAATAAAACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGGGTACGAATGATTTATTTTTA----ATTTT-CGTTCCTGAAAA--TTAAAAA----------TAAAATAAAAGACTTAAACCATAGTATAATTGATTTGA{AT}GATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTC------------------------------------------------------------------------------------------------------------------------------------0111100100111?101 Fernelia_buxifolia ------------------------------------CACCATTTTTTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATGTAAAT-----AGTCTAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGAAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGAT------------------------GGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTTCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAA-------------------GACTTAAACCACAGTCTAATTGATTTGATGATTTAAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTAT-----------------------------------------------------------------1011100??01111000 Gardenia_hansemannii --------------------------------TATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTTAGAAT----ATAACTTCGATATAAAA-TCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATTACGCGGGAAT--CAAATGTCCACAAGATTCCTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCGTTTAAATTGTCTCAATAAATG--------AGCCCGACTT-GTATCTTAAGATAAGAAATACA-----AATTTGAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTACCAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----CTTTT-CCGG{AG}ATG{AG}AAA{AG}{AG}{AG}{AG}AAAAAAAAA----------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTATGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATTTAC-----------------------------------10111000001111000 Guettarda_crispiflora --------------ATTGTGGATTCTTTATTATATCCACCATTTTCTATTTCTATAGGAATGAAGGTGCTCTTGACTCGACATCATTTGGTAATGAAAAT-----AGTCCATGATGGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAGAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTG--AAT----ATATCTCCGATCTAAAA--------AATCCCATTCGAACAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGTAATT--AACCAAACTTTTTCGATTCAAAGTGTATCACGCGAGAATATCAATCGTTCGTAAGATTCTTTGATA-----------------GAAGGAAAT-CC---AAAAAAAAGAGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCCAGAAC-----AAGGAAACACCCTTTTAATTGTCTCAATAACTG--------GGCCTGACAAT------TCAAA-TATA---TTT------TTTTTAAACGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACGATTTTCTT----------------------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----TTTTT-CGTTCCTGAAAAA-GAAAAAA--------------------GACTTAAATCATAGTCTAATTGATTTGATGATTTTAT------GGACCTC----ATTTATTAATTTATT--------AGAATTCCATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAGGAGAAAACCTCTTATACGTTTCTAGGAGGGGTATTCTTCATCTACATCTATCTCAATG----------------------00001000000110000 Ixora_coccinea ---------GATCCATTGTGGATTCTTTATTATATCCACCATTTTC{GT}ATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAC-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATACAAATCAATAAATTGGAATAACTTCGTT--AAT----ATAACTTTGATATAAAAATCTAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTCTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAACGATTGCTAAACTAAAGGA-----TCCCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAAAAATTTTCTTTTGAGCTATTT-----------------AACAGTTATCTAACTTGAGTTATGAGTACGAATGATTTATTTTTT----ATTTT-CAAGAATGAAAAA-GAAAGAAAAAAAAAA------------GACTTAAACCATAGTCTAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTT--CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATCTACATCTATCTCAATGAGCTGTCTATCGAATC------00111100001110000 Ixora_ferrea ----------------------------------------------------------------------CTTGGCTCGACATCCTTTGGTAATCTAAAC-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATACAAATCAATAAATTGGAATAACTTCGTG--AAT----ATAACTTTGATATAAAAATATAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTCTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAACGATTGCTAAACTAAAGGA-----TCCCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAACAAATGAAATTGCCTAAAAATTTGCTTTTGAGCTATTT-----------------AACAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAAGAATGAAAAA-GAAAAAAAAAAA---------------GACTTAAACCATAGTCTAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTT--CTCGAGCCGTACGAAGAGAAAACTTGATATACGTTTCTAGGAGGGGTAT-GTTCATCTACACCC-------------------------------00111100001110000 Ixora_finlaysoniana GAAGGAGACGATCCATTGTGGATTCTTTATTATATCCACCATTTTCTATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAC-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATACAAATCAATAAATTGGAATAACTTCGTG--AAT----ATAACTTTGATATAAAAATCTAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTCTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAACGATTGCTAAACTAAAGGA-----TCCCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAACGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAACAAATGAAATTGCCTAAAAATTTTCTTTTGAGCTATTT-----------------AACAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAAGAATGAAAAA-GAAAAAAAAA-----------------GACTTAAACCATAGTCTAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTT--CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATCTACATCTATCTCAATGAGCTGTCTATCGAATC------00111100001110000 Ixora_killipii ----------------------------ATTATATCCACCATTTTATATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAC-----AGTCCAGTATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATACAAATCAATAAATTGGAATAACTTCGTG--AAT----ATAACTTTGATATAAAAATCTAAAGGATACCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------CTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTCTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAAA--GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAACGATTGCTAAACTAAAGGA-----TCCCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGAGTTAGTATCTTAAGATAATAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAACAAATGAAATTGCCTAAAAATTTGCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTTTTTTTT----ATTTT-CAAGAATGAAAACAG---GAAAAAAAA--------------G{AG}CTTAAACCATAGTCTAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTT??CTCGAGCCGTACGAAGATAAAACTTCCTATACGT-------------------------------------------------------------00111100001110000 Keetia_gueinzii ---------------TTGTGGATTCTTTATTATATCCACCATTTTTTATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCGCGAGTAGAAAGTATTAATTGATTTCTCGGAGGAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AAT----CTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAG{AG}AC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----ACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAG{GT}ACGAATGATTTATTTTTTTTTTATTTT-AA--AATAAAAA--AAAAA------------AA{AT}--TAAAAGACTTAAA--------TAAT{GT}GATT{GT}GATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCCAGGAGGGGTATTTT{CT}CATCTACATCTATCTCAATAAGCTGTCTATCGAATCGTTGCA00111000001110011 Luculia_gratissima ---------GATCC-TTGTGGATTCTTT-TTATATCCC-CATTTACTATTTCTATAGGAATGAAGGTGCTCTTCGCTCGACATCATTTGGTAATGTAACT-----AATCCATGATGGAGCTCGAGTAGAAAGTATTAATTCATTTCTCGGAGCAATAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTA--AAT----ATATCTTCAATATAAAAATGGAAAGGATCCCATTCGAGCAAGTTTCCCATTCAAAAGGAAATT------TTGTTGGAATT--AATTAAACTTTTTCGATCCAAAGTGTATCACGCGGGAAT--CAATCGTCCGTAAGATTCTTTGATA-----------------GAAGGAAATCCC---AAAAG---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCCAGAAC-----AAGGAAACTCCATTTTAATTGTCTCAATAACTG--------GGCC--AC----------CAAA-TATATATATT-------TTTTAAAGGAGACAAA------------TAG-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATTTTCCTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----ATTTT-TAGGAACGAA----GAA-GAAAAAAA---------------GACTTAAATCATAGTCTAATTGATTTAATGATTTTTT------GGATCC-----TTTTGT-CATTTATT--------AGAATTCCATATATAGATGAAACTTCGAATCCAATTTTTTTTT-CTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGAGGGGTATTGTTCATCTACATCTATCTCAATGA---------------------00111000001110000 Mussaenda_scratchleyi --------------------------------TATCCACCATTTTCTATTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCGTTGGGTGATGGAAAT-----AGTCCAGGATGAAGCTTGAGTAGAAAGCATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTG--AAT----ATAGCTTCGATATAAAAATGGAAAAGATCCCATTCGAGCAAGTTTCCTATTCAAAAGGAAAAT------TTGTTGGAATT--AATCAAACTTTTTCGACCCAAAGTGTATCACACGGGAAT--CAATTGTACGTAAGATTCTTTGATA-----------------GAAGGAAAT-CC---CAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTA-----ATAAAGGAAAGGATCCCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAAGATCTTAAGATAAGAAATCAA-----AATTTTAAATGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGTCTAACAATTTTCCTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----TTTTT-CGTTCTTGAAAAA-GAAAAAAA-------------------GGCTTAAATAATAGTCTAATTGATTTGATGATTTTATTT--ATGGACCT-----TTTTGT-TATTTATT--------AGAATTCCATACATAGATAAAACTTCAAATCAAATTATTTTTT-CTCGAGCCGTACGAGGCGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCA----------------------------------------00101000001110000 Nematostylis_anthophylla ---------------------------------------------------------------------TCTTGGCTCGACATCATTTGGTAATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCTATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGTGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCGTTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAAAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAAAA-----------------AACTTAAACCATAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGT-------------------------------------------------------------------------------------10111000001110000 Paragenipa_lancifolia --------------ATTGTGGATTCTTTATTATATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTGCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTTCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-G?AAAAAA-------------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTAAATACATAGATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGA----------------------------------------------------------------------------10111000001111000 Pavetta_platyclada --------------------------------TATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGTATAGAGCTCGAGTAGAAAGTGTTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAA{GT}TGTATCACGCGGGAAT--CAAACGTCCACAAGATTCTTTGATA-----------------AAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAA{AC}CCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAAATG--------AGCCCGACTTAGCATCTTAAGATAAGAAATAAA-----AATTTTAAGGGAGACAAA------------TAA-GGGGGTAAAGACCACTC{AC}ATAAATGAAATTTCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATT-CTTTTTTT---ATTTT-CCGGGATGAAAA--G{AG}{AG}AAAAAAAAA---------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATATATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCA----------------------------------------10111000001111000 Peponidium_comorense -------------------------------------------------------------------GCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AAT----CTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----ACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGGGTACGAATGATTTTTTTTT-----ATTTT-CAGGAACGAAAA--AAAAAAAA---------TAAAATAAAAGACTTAAACCATAGTATAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACT----------------------------------------------------------------------------------00111000001110101 Psydrax_livida --------------------------------------------------------GGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AAT----CTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGTAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATTACGCGGGAAT--TAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----ACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTATTTTTT----ATTTT-CAGGAACGAAAA--AAAAA------------TAA--TAAAAGACTTAAAC----------TTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCCAGGAGGGGTATTGTTCATCTACATCTATCTCAATAAGCTGTCTATCGAATCG-----00111000001100011 Psydrax_odorata --------------ATTGTGGATTCTTTATTATATCCACCATTTTATATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AAT----CTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----ACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTATTTTTT----ATTTT-CAGGAACGAAAA--AAAAAAA----------TAA--TAAAAGACTTAAAC----------TTGATTTGATGATTTTAT------GCACCCC----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAA-CTTCCTATACGTTTCCAGGAGGGGTATTGTTCATCTACATCTATCTCAAT-----------------------00111000001100011 Pyrostria_hystrix ---------GATCCATTGTGGATTCTTTATTATATCCACCATTTTATATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AAT----CTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----ACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGGGTACGAATGATTTATTTTTT----ATTTT-AAGGAACGAAAA--AAA--------------AAAAATAAAAGACTTAAACCATAGTATAATTGGTTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCCAGGAGGGGTATTGTTCATCTACATCTATCTCAATAAGCTGTCTATCGAATC------00111000001110001 Randia_schumanniana --------------------------------TATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTAAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCCTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAA-----CTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAAA------------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCA----------------------------------------10111000001111000 Retiniphyllum_pilosum ------------------------------TATATCCACCATTTTCTATTTCTATCGTAATGAAA?TGCTCTTGGCTCGACATCATTTGGTAATGGAAAT-----AGTCTAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTTGGAGCAAGAATCTAGGGTTAATGCAAATCAATAAATTGTAACAACTTTGTG--AAT----ATAGCTTCGATATAAAAATTGAAAGGATCCCATTCGAGTAAGTTTCCCATTCAAAAGTAAAATAAAAATCTCTTGGGATT--AATCAAACTTTTTCGACCTACAGTGTATC-GGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTC----AAAAA--GGGGGTATGTTGCTGCCATTTTAAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTA-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGTCCGACTTAAGATCTTTAAATAAGAAATAAA------ATTGTAAAAGAGGCAGA------------T-G-GGGGGTAAAGATCACTCAATAAATGAAATTGTTAGTCAATTTCATTTT---------TCGATATTATAAATTATAAAAGTTATGTAACTTGAGTTATGAGTACGAATAATTTCTTTTTT----ATTTT-CAGGAGCGAAAAA-GAAAAAAA-------------------GACTTAAAACACAGTCTAATTGATTTGATGATTTTAT------GCATCT-TTTTTTTTAT-GATTTACTCATTTCTGAGAATTCCATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTGTAAGGGGGGTATTGTTCATCTACATCTATCTCAATG----------------------00111000001110000 Rhopalobrachium_fragrans ---------------------------------------------------------GAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AATCAATCTAACTTCGATATAAAAATTGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTTGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCTAGAAC-----AAGGAAACACCATTTTAATTGTCTCAATAACTG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAAATAAAACTTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGACTAACAATTTTCTTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGGGTACGAATGATTTATTTTTT----ATTTT-CGTTCCTGAAAA-------------------TAAAATAAAAGACTTAAACCATAGTATAATTGATTTGATGATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCCAGGAGG---------------------------------------------------01111001001110101 Sabicea_aspera ----------------TGTGGA??????ATTATATCCACCATTTTCTTTTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCATTTGGTAATGGAAAT-----AGTCCAGGATGGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAGAATCTAGGGTTAATGAAAATCAATAAATTGGAACAACTTCGTG--AAT----ATAGCTTCGATATAAAAATCGACAGGATCCCATTCGAGCAAGTTTACCATTCAAAACGAAAAT------TTGTTGGAATT--AATCAAACCTTTTCGACCAAAAGTGTATCACGCGGGAAT--CAATTGTCCGTAAGATTCTTTGATA-----------------GAAGGAAAT-CC---GAAAA---AAGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGG-----TCCCGGAACGGAACAAGGAAACACCATTTTAATTGTCTCAATAACGT--------AGCCCGACTTAAGATCTTAAG-TAAGATAAGAAATCCAAATTTTAAACGAGACAAAACAAA-------TAA-GGGAGTAAAGACCACTCAATAAATGAAATTGCTTAACGATTTTCCTTTGAGCTATTT-----------------A--------CTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----ATTTT-CAGGAACGAAAAA-GAAAAAAA-------------------GACTTAAATCATAGTCTAATTGATTTGATGAGTTTAT------GGACCC-----TTTTGT-GATTTGTT--------AGAATTCCACACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCA??????TCTATCTCAATG----------------------00101010111010000 Sabicea_mollis ------------------------------------CACCATTTTCTTTTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCATTTGGTAATGGAAAT-----AGTCCAGGATGGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAGAATCTAGGGTTAATGAAAATCAATAAATTGGAACAACTTCGTG--AAT----ATAGCTTCGATATAAAAATCGACAGGATCCCATTCGAGCAAGTTTACCATTCAAAACGAAAAT------TTGTTGGAATT--AATCAAACCTTTTCGACCAAAAGTGTATCACGCGGGAAT--CAATTGTCCGTAAGATTCTTTGATA-----------------GAAGGAAAT-CC---GAAAA---AAGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGCACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGG-----TCCCGGAACGGAACAAGGAAACACCATTTTAATTGTCTCAATAACGT--------AGCCCGACTTAAGATCTTAAG-TAAGATAAGAAATCCAAATTTTAAACGAGACAAAACAAA-------TAA-GGGAGTAAAGACCACTCAATAAATGAAATTGCTTAACGATTTTCCTTTGAGCTATTT-----------------A--------CTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----ATTTT-CAGGAACGAAAAA-GAAAAAAA-------------------GACTTAAATCATAGTCTAATTGATTTGATGAGTTTAT------GGACCC-----TTTTGT-GATTTGTT--------AGAATTCCACACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCTAGG------------------------------------------------------00101010111010000 Sipanea_biflora --------------ATTGTGGATTCTTAATTACATCCACCATTTTCTATTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCATTTGGTAATGGAAAT-----AGTCCAGGATGGAGCTCGAGTCGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTG--AAT----ATAGCTTCGATATAAAAATTGAAAGGATCCCATTCGAGCAAGTTTACCATTCAAAAGGAAAAT------TTGTTGGAATTCTAATCAAACTTTTTCGACCTAAAGTGTATCACGCGGGAAT--CAATTGTTCGTAAGATTCTTTGATA-----------------GAAGGAAAT-C-TATAAAAA---GAGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAACACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCCCAGAAC-----AAGGAAACACCATTGTAATTGTCTTAATAACTG--------AACCCGACTTAAGATTTTAAGATAATAAATCTA-----AAATTGAAACAAGACAAA-----TAAGAAATA--GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACGATTTTCCTTTGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTC----ATTTT-CAGGAACGAAAAA-GAAAAAA--------------------GACTTAAATCATAGTCTAATTTATTTGATGATTTTAT------GGACCC-----TTTTGG-GATTTATT--------AGAATTCCATACATAGATAAAACTTCGAATCAAATTCTTTTTT-CTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATCTATATCTATCTCAATG----------------------001?1000001110000 Tarenna_borbonica ----------------------------ATTATATCCACCATTTTCTATTTCTATAGGAATGA{AT}AGTGCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTGTTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGAAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA---GGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATGAAATTGCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAACAGAAAAAAAAA-----------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTATTTT-ATGCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATATATAAAATTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAA-CTTCCTATACGT-------------------------------------------------------------10111000001110000 Tarenna_buruensis --------------------------------TATCCACCATTTTCTATTTCTATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATATAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTGTTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATTACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------?AAGGAAATTCC---AAAAA---GGGGT{AT}TGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAA{AC}CCC{AC}ATGATTG-----ATAAAAGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAAT{AT}AATG--------A?CCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTT{AT}AAGGAGACCAA------------TAA-GGGGGTAAAGACCACTC{AC}ATAAATGAAATTGCCTAACAATTTTCTTTTGAGCTATTT-----------------AAAAGTTATTTAACTTGAGTT{AT}TGAGT{AT}CGAATGATTTCTTTTTT----ATTTT-{CT}CGG{AG}{AG}-GG{AG}AA????AAAAAAAAAA---------------GACTTAAACCACAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATATATAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATTTACATCTATCTCAATG----------------------10111000001111000 Tricalysia_cryptocalyx --------------GTTGTGGATTCTTTATTATATCCACCATTTTCTATTTCTATAGGAATGAAGGTGCTCTTGGCTCGACATCATTTGGTAATGTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAATTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAACAACTTCGTGAGAAT----ATAACTTCGATATAAAAATCGAAAGGATCCCATTCGAGGAAGTTTCCCATTCAAAAGGAAAAT------TTGTTGGGATT--AATCAAACTTTTTCGACCCAAAGTGTATCACGCGGGAAT--CAAATGTCCACAAGATTCTTTGATA-----------------GAAGGAAATTCC---AAAAA----GGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGGAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TCTCAGAAC-----AAGGAAACACCATTTAAATTGTCTCAATAAATG--------AGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----AATTTTAAAGGAGACAAA------------TAA-GGGGGTAAAGACCACTCAATAAATTAAATTGCCTAACAATGTTCTTTTGAGCTATTT-----------------AAAAGTTATCTAACTTGAGTTATGAGTACGAATGATTTCTTTTTT----ATTTT-CAGGAATGAAAAA-GAAAAAAAAAA----------------GACTTAAACCGCAGTCTAATTGATTTGATGATTTTAT------GCACCT-----TTTTAT-GATTTACT--------AGAATTCAATACATAGGTAAAACTTCGAATCAAATTATTTTTTTCTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGGAGGGGTATTGTTCATCTACATCTATCTCAATG----------------------10110000001111000 Vangueria_madagascariensis -------------------------------------CACCTTTTATATTTATATAGGAATGAAAGTGCTCTTGGCTCGACATCATTTGGTAATCTAAAT-----AGTCCAGGATAGAGCTCGAGTAGAAAGTATTAGTTGATTTCTCGGAGCAAAAATCTAGGGTTAATGCAAATCAATAAATTGGAATAACTTCGTG--AAT----ATAACTTCGATATAAAAATGGAAAGGATCCCATTCGAGGAAGTTTCTCATTCAAAAGGAAAAT------TTGTTGGTATT--AATCAAACTTTTTCGAACCAAAGTGTATCACGCGGGAAT--CAATTGTCCATAAGATTCTTTGATACACAAGATTCTTTGATAGAAGTAAATTCC---AAAAA---AGGGTATGTTGCTGCCATTTTGAAAGGATTAAGAAGGACCGAAGTAAT-GTCTAAACCCAATGATTG-----ATAAAGGA-----TTCTATAAC-----AAGGAAACACCGTTTTAATTGTCTCAATAACTGAATAACTGAGCCCGACTTAGTATCTTAAGATAAGAAATAAA-----CCTTTTAAAGGAGACAAA------------TAA-AGGGGTAAAGACCACTCAATAAATGAAATTTACTAA-----------TGAGCTATTT-----------------AAGAGTTATCTAACTTGAGTTATGAGTACAAATGATTTCTTTTT-----ATTTT-CAGGA-CGAAAAA-AAAAAAAAA------------------GACTTAAACCATAGTATAATTGATTTGATAATTTTAT------GCACCC-----TTTTAT-GATTTACT--------AGAATTCAATACATAGATAAAACTTCGAATCAAATTATTTTTT-CTCGAGCCGTACGAAGAGAAAACTTCCTATACGTTTCTAGG------------------------------------------------------00111000001110000 ; END; [ The following blocks are output data for analysis step 3597 ] BEGIN TREES; TITLE Tb8370; LINK TAXA = TaxaForAnalysisStep3597; TREE Fig._2 = [&R] (Luculia_gratissima,(Sipanea_biflora,(Condaminea_corymbosa,((Sabicea_aspera,Sabicea_mollis),(Mussaenda_scratchleyi,(Retiniphyllum_pilosum,(((Ixora_coccinea,(Ixora_finlaysoniana,(Ixora_killipii,Ixora_ferrea))),(Vangueria_madagascariensis,((Pyrostria_hystrix,(Peponidium_comorense,(Rhopalobrachium_fragrans,Cyclophyllum_deplanchei))),(Keetia_gueinzii,(Psydrax_odorata,Psydrax_livida))))),(Augusta_austrocaledonica,(((Bertiera_aethiopica,(Coffea_arabica,Tricalysia_cryptocalyx)),((Pavetta_platyclada,Tarenna_buruensis,Tarenna_borbonica),(Atractocarpus_stipularis,Gardenia_hansemannii,(Aulacocalyx_jasminiflora,Randia_schumanniana))),(Cremaspora_triflora,Paragenipa_lancifolia,Fernelia_buxifolia)),(Alberta_minor,Nematostylis_anthophylla))))))))),(Chiococca_alba,Guettarda_crispiflora)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2743] END;