#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 12, 2025; 11:13 GMT

TreeBASE (cc) 1994-2008

Study reference:
Costello A., & Motley T. 2007. Phylogenetics of the Tetraplasandra Group (Araliaceae)
inferred from ITS, 5S-NTS, and morphology. Systematic Botany, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1798]

[ The following blocks are input data for analysis step 3612 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep3612;
        DIMENSIONS NTAX=17;
        TAXLABELS
            Gastonia_mauritiana
            Gastonia_rodriguesiana
            Gastonia_spectabilis
            Munroidendron_racemosum
            Reynoldsia_lanutoensis
            Reynoldsia_marchionensis
            Reynoldsia_pleiosperma
            Reynoldsia_sandwicensis
            Reynoldsia_verrucosa
            Tetraplasandra_bisattenuata
            Tetraplasandra_flynnii
            Tetraplasandra_gymnocarpa
            Tetraplasandra_hawaiensis
            Tetraplasandra_kavaiensis
            Tetraplasandra_oahuensis
            Tetraplasandra_waialealae
            Tetraplasandra_waimeae
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1880]

	TITLE 5S_data;
	LINK TAXA = TaxaForAnalysisStep3612;
	DIMENSIONS NCHAR=206;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                       10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210  ]
[                                        .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .  ]
Gastonia_mauritiana             CCCGTTAGGGTTATCCGTTTTTACTTCTATATGCCCAACTTTTAGGACTGCCCGATTTTGTTCCTATATTTCCACGTGCCGGTGCCGCGCGTTTTGAGTTTTACGTCGCGCGTGCGCGT{CT}TACTAAGCCACGTCCACTCGTACGCGCATTTCCTTTCACCATTTTCC-CCAAAATGGCAAAATAGATGCAAAAAGAAGGAGGGGG{GT}
Gastonia_rodriguesiana          ACCGTCAGGGTTATCCGGTTTTACTTCTATATGCCCAACTTTTAGGATTGTCCGATTTTGTTCCTATATTTCCACGTGTCGGTGTCGCGCGTTGTGAGTTTTACGTCGCGCGTGCGCGTTTACTAAGCCACGTTCACTCGTACGCGCATTTCCTTTCACAATTTTCCCCCGAAATGGAAAAATAGATGCAAAAAAAAGAGGGGGGG
Gastonia_spectabilis            --CCGTAGG-TTATCCGTTTTTACTACTATATTCCCAACCGTTAGGATTATCCGATTTTGTGCCTATATTGTCACGTGCCGGGGCCGCGCGTCGTGAGTTTTACGTCGCGCGTGCGCGTTTGCTAAGCCACGTTCATTCGTACGCGCCTTTCCTTTCACCATCTTCCCCCAAAATGGCAAAA?AAA?GCAAAAAAAA-?GGGGGGG
Munroidendron_racemosum         ----------CTTTTTTCTTTTATTCCTATATTCTCAACCGTTGGGATTATTTGATTTTGTGCCAATATTCCCACGTGTCGGTGCCGCGCGTTGTGAGTTTGACGTCGCGCATGCCCGTTTACTATGCCACGTTCACTCGTACGCGCGTTTCCTTTCACCATCTTCCGCCAAAAAAAGAAAAAAGATGCAAAAAAAAGAGGGGGGT
Reynoldsia_lanutoensis          -CCCGTAGG-T-ATC-CGTTTTACTGCT-TATTCC-AACCGTT{AG}GGATTATCCGATTTTGTGCCTATATTCCCACGTGTCGGTGTCGCGCGTTGTGAGTTTTACATCGCGCGTGCGCGTTTACTAACCCACGTTCACTCGTACGCACATTTTCTTTCATAATTTTTCCCCAAAATGG{AC}AAAATAGACGCAAAAAGAGGGGGGGGGG
Reynoldsia_marchionensis        -CCGTTAGG-TTATCAGTTTTTACTGCTGTATTCCCAACCGTTAGGATTATCCGATTTTGTGCCTATATTTCCACGTGTCGGTTTCGCGCGTTGGGAGTTTGACATCGCGCGTGCGTGTTTACTAACCCGCGTTCACTCGTACGCACATTTTCTTTCATAATTTTTCCCCAAAATGGACAAATAAAC{GT}CAGGGGGA-G-GGGGGGG
Reynoldsia_pleiosperma          --CGTTAGGGTTATCCGTTTTTACTGCTATATTCCCAACCGTTAGGATTATCCGATTTTGTGCCTATATTTCCACGTGTCGGTGTCGCGCGTTGTGAGTTTTACG{AT}CGCGCGTGGGTGTTTACTAACCCGCGTTCACTCGTACGCACATTTTCTTTCATAATTTTTCCGCAAAATGGCAAAATAGACGCAAAAAGA-G-GGGGGGG
Reynoldsia_sandwicensis         CCCGCTAAGGTTTTCTTTTTTTATTCCTATATTCTCAACCGTTGGGATTATTTGATTTTGTGCCGATATTCCCACGTGTCGGTGCCGCGCGTTGTGAGTTTGACGTCGCGCATGCCCGTTTACTATGCCACGTTCACTCGTACGCGCGTTTCCTTTCACCATCTTCCGCCAAAAAAAGAAAAAAGATGCAAAAAAAAGAGGGGGGT
Reynoldsia_verrucosa            CCCGTTAGGGTTATCAGGTTTTACTGCTATATTCCCAACCGTTAGGATTATCCGATTTTGTGCCTATATTTCCACGTGTCGGTGTCGCGCGTTGTGAGTTTGACATCGCGCGTGCGTGTTTACTAACCCACGTTCACTCGTACGCACATTTTCTTTCATAATTTTTCCCCAAAATAGAAAAATTGACGCAAAAAGAGGGGGGG---
Tetraplasandra_bisattenuata     CCCGCTAGGGTTATCTCTTTT-ATTTCTATATTCCAAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAAAGTGTCGGTGCTGCGCGTTGTAAGTTTTACAATGTGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCACGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGA-GGGGGT
Tetraplasandra_flynnii          CCCGCTAGGGTTCTCTCTTTTTATTTATATATTCCCAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAACGTGTCGGTGCCGCGCGTTGTGAGTTTTACAATGCGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCGCGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAA--------------
Tetraplasandra_gymnocarpa       CCCGCTAGGGTTCTCTCTTTTTATTTATATATTCCCAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAACGTGTCGGTGCCGCGCGTTGTGAGTTTTACAATGCGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCGCGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGA-GGGGGT
Tetraplasandra_hawaiensis       CCCGCAAGGGTTCTCTCTTTTTATTTCTATATTCCCAACCGTTGGGATTATTTGATTTTGTGCCTATATTCCCACATGTCGGTGCCGCGCGTTGTAAGTTTTACGTCGCGCATGCACGTTTACTATGCCACGTTCACTCGTACGCGTGTTTCCTTTCACCATCTTCCGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGAGGGGGGA
Tetraplasandra_kavaiensis       CCCGCTAGGGTTCTCTCTTTTTATTGATATATTCCCAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAACGTGTCGGTGCCGCGCGTTGTGAGTTTTACAATGCGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCGCGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGA-GGGGGT
Tetraplasandra_oahuensis        CCCGCTAGGGTTATCTCTTTTTATTTCTATATTCCAAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAACGTGTCGGTGCTGCGCGTTGTACGTTTTACAATGTGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCACGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGA-GGGGGT
Tetraplasandra_waialealae       CCCGCTAGGGTTATCTCTTTTTATTTCTATATTCCAAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAACGTGTCGGTGCTGCGCGTTGTACGTTTTACAATGTGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCACGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGA-GGGGGT
Tetraplasandra_waimeae          CCCGTGAGGGTTATCTCTTTTTATTTCTATATTCCAAACCGTTGGGATTATCTGATTTTGTGCCTATATTCCAACGTGTCGGTGCTGCGCGTTGTACGTTTTACAATGTGCGTGCGCGTTTACTATGCCACGTTTACTCGTACGCACGGTTCCTTTCACCATCTTCTGCCAAAAAAAGAAAGAAGATGCAAAAAGAAGA-GGGGGT
;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions (CHARACTERS = 5S_data) = 
		N: 1-206;
CODONPOSSET  CodonPositions (CHARACTERS = 5S_data) = 
		N: 1-206;
END;
[ The following blocks are output data for analysis step 3612 ]
BEGIN TREES;
      TITLE Tb8385;
      LINK TAXA = TaxaForAnalysisStep3612;
      TREE Fig._1b = [&R] ((Gastonia_rodriguesiana,Gastonia_mauritiana),((Reynoldsia_pleiosperma,Reynoldsia_lanutoensis,(Reynoldsia_marchionensis,Reynoldsia_verrucosa)),(Gastonia_spectabilis,((Tetraplasandra_hawaiensis,(Reynoldsia_sandwicensis,Munroidendron_racemosum)),((Tetraplasandra_gymnocarpa,Tetraplasandra_kavaiensis,Tetraplasandra_flynnii),(Tetraplasandra_bisattenuata,(Tetraplasandra_oahuensis,Tetraplasandra_waialealae,Tetraplasandra_waimeae)))))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2756]


END;