#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on September 19, 2025; 10:12 GMT

TreeBASE (cc) 1994-2008

Study reference:
Ruiz-sánchez E., Sosa V., & Mejia-saulés M. 2008. Phylogenetics of Otatea Inferred
from Morphology and Chloroplast DNA Sequence Data, and Recircumscription of Guaduinae
(Poaceae: Bambusoideae). Systematic Botany, 33(2): 277-283.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1884]

[ The following blocks are input data for analysis step 3843 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep3843;
        DIMENSIONS NTAX=26;
        TAXLABELS
            Apoclada_simplex
            Arthrostylidium_ecuadorense
            Atractantha_radiata
            Aulonemia_clarkiae
            Aulonemia_fulgor
            Aulonemia_laxa
            Aulonemia_patula
            Bambusa_vulgaris
            Chusquea_bilimekii
            Eremocaulon_asymmetricum
            Eremocaulon_aureofimbriatum
            Glaziophyton_mirabile
            Guadua_aculeata
            Guadua_amplexifolia
            Guadua_angustifolia
            Guadua_longifolia
            Guadua_paniculata
            Guadua_velutina
            Neurolepis_aperta
            Olmeca_recta
            Olmeca_reflexa
            Otatea_acuminata
            Otatea_fimbriata
            Otatea_glauca
            Otatea_sp_nov
            Rhipidocladumracemiflorum
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3432]

	TITLE Appendix_3;
	LINK TAXA = TaxaForAnalysisStep3843;
	DIMENSIONS NCHAR=61;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4" MISSING=? GAP= -;
	CHARSTATELABELS
		1  R5,
		2  C1,
		3  C2,
		4  C3,
		5  C5,
		6  C10,
		7  C11,
		8  C13,
		9  B11,
		10  B12,
		11  B13,
		12  B15,
		13  B17,
		14  B18,
		15  CL1,
		16  CL2,
		17  CL5,
		18  CL7,
		19  CL8,
		20  CL9,
		21  CL10,
		22  CL11,
		23  CL12,
		24  CL13,
		25  FL1,
		26  FL3,
		27  FL4,
		28  FL5,
		29  FL6,
		30  SF2,
		31  SF3,
		32  SF4,
		33  SP1,
		34  SP2,
		35  SP3,
		36  SP4,
		37  SP5,
		38  SP6,
		39  SP9,
		40  SP12,
		41  SP14,
		42  SP15,
		43  FW2,
		44  FW3,
		45  FW7,
		46  FW8,
		47  FW9,
		48  FW10,
		49  FW11,
		50  TipoFruto,
		51  72.,
		52  73.,
		53  74.,
		54  76.,
		55  77.,
		56  79.,
		57  80.,
		58  81.,
		59  82.,
		60  83.,
		61  84.,
		;

MATRIX
[                                       10        20        30        40        50        60        70 ]
[                                        .         .         .         .         .         .         . ]
Apoclada_simplex                0114000010101202000100--300000001211111020011011100-020200001
Arthrostylidium_ecuadorense     020-001011101113101200--31100000120120000001??????12120001010
Atractantha_radiata             02{02}3000011101112000100--3010011120-02000000111010012100001011
Aulonemia_clarkiae              0112010021001100111100--300010002211103010011011100-020110101
Aulonemia_fulgor                0113010021001100111100--300010002211100010011011100-030110101
Aulonemia_laxa                  0112011011101012101210--3110000012112011200100010012100001011
Aulonemia_patula                0112011011101012101210--3110000012112110200111010012120001011
Bambusa_vulgaris                0113010021100100000001000100011112010000000221001010120110101
Chusquea_bilimekii              000-001021100102000100--0000000024000-01100100011010111010100
Eremocaulon_asymmetricum        020-010021101112111102012001112110-1110010022011000-020110101
Eremocaulon_aureofimbriatum     1112010021101100111002012001112110-1110011022011000-020110101
Glaziophyton_mirabile           {01}01?1000------?2000110--301001{12}11{012}012001001110?10010120101101
Guadua_aculeata                 0112010121111100000000--0000011110-1110011121110100-020100101
Guadua_amplexifolia             011201012111110000000210{03}000011110-1111001122110100-020100101
Guadua_angustifolia             0123010121111100000000--{23}000011110-1110011121110100-020100101
Guadua_longifolia               0122010021111102000000--2000011110-1110011111110100-020100101
Guadua_paniculata               {01}113010121111112000000--300001{12}110-11100011221101010130100101
Guadua_velutina                 011200012111110000000210{03}000011110-1112001121110100-020100101
Neurolepis_aperta               000-1010---0--2---------1000000024000-01-01100011010101100001
Olmeca_recta                    1111011011001000010100--300010001201100010011010110-020110101
Olmeca_reflexa                  1223011011001000011100--300010001201100010011011110-020110101
Otatea_acuminata                01{01}20000201013000{01}0100--3000000012111141100110111010130101100
Otatea_fimbriata                01{01}3000020101300010100--300110001211114110011011100-020101100
Otatea_glauca                   0111000020101300011100--300010001211114110011011100-020101100
Otatea_sp_nov                   0113000020101300111100--30001?????????????????????10120101100
Rhipidocladumracemiflorum       0111000031-00402000000--3010000012112011100121011012130111111
;
END;

[ The following blocks are output data for analysis step 3843 ]
BEGIN TREES;
      TITLE Tb8616;
      LINK TAXA = TaxaForAnalysisStep3843;
      TREE Fig._1 = [&R] (Bambusa_vulgaris,((Glaziophyton_mirabile,Rhipidocladumracemiflorum,(Apoclada_simplex,(((Otatea_glauca,Otatea_fimbriata),(Otatea_acuminata,Otatea_sp_nov)),(((Aulonemia_clarkiae,Aulonemia_fulgor),(Olmeca_recta,Olmeca_reflexa)),(Eremocaulon_aureofimbriatum,Eremocaulon_asymmetricum)))),(Atractantha_radiata,(Arthrostylidium_ecuadorense,(Aulonemia_laxa,Aulonemia_patula))),(Chusquea_bilimekii,Neurolepis_aperta)),(Guadua_paniculata,(Guadua_amplexifolia,Guadua_velutina,(Guadua_aculeata,(Guadua_angustifolia,Guadua_longifolia))))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2856]


END;