#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 12, 2024; 5:08 GMT TreeBASE (cc) 1994-2008 Study reference: Schardl C.L., Craven K., Speakman S., Stromberg A., Lindstrom A., & Yoshida R. 2008. A novel test for host-symbiont codivergence indicates ancient origin of fungal endophytes in grasses. Systematic Biology, 57(3): 483-498. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S2024] [ The following blocks are input data for analysis step 4196 ] BEGIN TAXA; TITLE TaxaForAnalysisStep4196; DIMENSIONS NTAX=26; TAXLABELS Epichloe_amarillans_200743So Epichloe_amarillans_200744Ah Epichloe_baconii_200745Cv Epichloe_baconii_200746At Epichloe_brachyelytri Epichloe_bromicola_200749Be Epichloe_bromicola_201558Br Epichloe_elymi_201551Ec Epichloe_festucae_1157Kc Epichloe_festucae_28Fl Epichloe_festucae_90660Frc Epichloe_glyceriae_200755Gs Epichloe_sp_9924Hm Epichloe_sylvatica_200751Bs Epichloe_typhina_200736Lp Neotyphodium_aotearoae_829 Neotyphodium_canariense_989Lc Neotyphodium_coenopialum_19T Neotyphodium_gansuense_818Ai Neotyphodium_lolii Neotyphodium_occultans_999Lm Neotyphodium_sp_1081Bpu Neotyphodium_sp_362Heur Neotyphodium_sp_3635Hbr Neotyphodium_sp_4074LaT Neotyphodium_sp_4078LaA ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3119] TITLE 'Endophytes, tefA tubB'; LINK TAXA = TaxaForAnalysisStep4196; DIMENSIONS NCHAR=1367; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Epichloe_amarillans_200743So GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTAACTTGTTTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAATATATTGTACTCCTCT--CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT-GGGTGGGCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCTCTTTTTCGCCCGCGATACGAA----------TTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACGAGAGAGACATGA-----CATGACATTCGCGTGGCCCCCC------------------AAAAAAAA-------TTG-TGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTCTT-CTCACCCGATCTGCATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAACGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AGAGAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_amarillans_200744Ah GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTAACTTGTTTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAATATATTCTACTCCTCT--CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCTTCTTTTCGCCCGCGATACGAA---------TTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACGAGAGAGACATGA-----CATGACATTCGCGTGGCCCCCC------------------AAAAAAAA-------TTG-TGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTCTT-CTAACCCGATCTGCATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCGTTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAACA--ACATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AGAGAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_baconii_200745Cv GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTACCCCTCT--CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTT--------------GCCCCTCTTTTTCGCCCGCGATACGAAA------------TTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-AAGCTAGAAGACGCAAAC--GAGAGACATGA-----CATGACATTCGCGTGGCCTCCC------------------AAAAAAAAA------TTG-TGATGACAAATTACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGATACACTAGACTCT-ATCAACCCGATCTGTATCATTAACGTGCATCTACTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCAAACGAC-GGGCACAAACA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGACGGGAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_baconii_200746At GTAAGTTGACT-TTGACCTGTATCATTTGATGTATTGGATAA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTACCCCTCT--CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTTTT------------GCCCCTC-TTTTCGCCCGCGATACGAA---------TTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTTGAAGACGCAAACGAGAGAGACATGA-----CATGACATTCGCGTGGCCCCCC------------------AAAAAAAA-------TTG-CGATAAAAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCCCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCTCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATC-GCCGACCTCGAACGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCTTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGACGGAAAAAGAACG--------AAAGAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_brachyelytri GTAAGTCGACT-TTGACCTGTATCATTCGATGTATTGGAAAA---CAGTTGCTAACTTGTCTTCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAA-----------TTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTTGGTCT-GAGCTAG-AGACGCAAACGAGAGAGACATGA-----CATGACATTCGCGTGGCCTCCC------------------AAAAAAAA-------TTG-TGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGAACCCCGCCGAGTGCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTCATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTTT-CTTTCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGGACGAC-AGGCACAAATA--ACATG-AAAAACTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGAGACGGAAAGAGAAGG--------AAAGAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_bromicola_200749Be GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTCGCTAACTTAACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAA-------CTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-AAGCTAG-AGACGCAAACGAGAGAGTCATGA-----CATGACATTCGCGTGCCCTCCC------------------AAAAAAAAA------CTG-TGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCTTATCAACCTGATCTGTATCACTAACGTGCATCTACTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTT-CCTTCCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAATAACACATG-GAAAACTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTG----CATACCGCCCTGGAGATGAGACGGAAAGAGAACG--------AT--AAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_201558Br GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTCGCTAACTTAACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGACGTTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAAATTTTTTTTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-AAGCTAG-AGACGCAAAC--GAGAGTCATGA-----CATGACATTCGCGTGCCTCCCC------------------AAAAAAAAAA-----CTG-TGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATCTACTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTT-CCTTCCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAACAACACATG-GAAAACTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGCAGATGAGACGGAAAGAGAACG--------AT--AAAAAGTGTTAAC--ATGCTCATCTATGTGACAG Epichloe_elymi_201551Ec GTAAGTTTACT-TTGACCTGTATCATTCGATGTATCGGATAA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTGACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAA-------TTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCAC-TGGTCT-AAGCTAG-AGACGCAAACGAGAGAGACATGA-----CATGGGATTCGCGTGGCCTCCC------------------AAAAAAAA-------CTG-TGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGATCTGTATCATTAACGTGCATCTTTTAGCGCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGA--CCTTTTT-CTTCCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTAGAACGAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTCATCATATGCTAATCTATGTGACAG Epichloe_festucae_1157Kc GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTGACTTGTCTGCCAACAGGGGTACGTACTGCAAAATATCACTCGCCGCTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGATTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTTTACCCCTCT--CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTT--------------GCCCCTC-TTTTCGCCCGCGATACGAA-------TTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAAAAAACGCAAACGAGAAAGACATGA-----CATGACATTCGCGTGGCCCACC-TCTCCCCCCCCCCCCC--AACAAA--------TTG-TGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAACGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_28Fl GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTGACTTGTCTGCCAACAGGGGTACGTACTGCAAAATATCACTCGCCGCTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGATTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTTTACCCCTCT--CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTT--------------GCCCCTC-TTTTCGCCCGCGATACGAA-------TTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAAAAAACGCAAACGAGAAAGACATGA-----CATGACATTCGCGTGGCCCACC-TCTCCCCCCCCCCCCCC-AACAAA--------TTG-TGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAACGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_90660Frc GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTGACTTGTCTGCCAACAGGGGTACGTACTGCAAAATATCACTCGCCGCTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGATTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTTTACCCCTCT--CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTT--------------GCCCCTC-TTTTCGCCCGCGATACGAA-------TTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAAAAAACGCAAACGAGAAAGACATGA-----CATGACATTCGCGTGGCCCACC-TCTCCCCCCCCCCCCCC-AACAAA--------TTG-TGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAACGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_glyceriae_200755Gs GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAC---CAGTTGCTAACTTGTCTGCTAACAGGGGTGCGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTTGAGAAGGTAAGATACTCTTCTTTCACGTCGCGCATAATATGTGATGTTCAGTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCAAGCAACT-----------GCCCCTC-TTTTCGCCCGCGATTCGAA---------TTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TG-TTATGAGCTAG-AGACGCAAACGAGAGAGACATGACATGGCATGACATTCGCGTGGCCTCCC------------------AAAAAAAAA------CTG-TGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAACCCGATCTGTATCATTAACGTACATATACTAGCTCTCTGTTTGTCTTGGGGACCCCCT---C---GACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAAAGATTGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTTT-CTTCCCCTCTTCTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAGCGAC-AGGCACCAATA--ACATG-AAAAACTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTAT----ATACCGCCCTGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTCATA--ATGCTAATCTATGTGACAG Epichloe_sp_9924Hm GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTAACTTGTATGCTAACAGGGGTACGTACTGCGGAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTACCCCT?T--CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTATCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTT--------------GCCCCTC-TTTTCGCCCGCGATACGAAA------------TTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACGGGAGAGACATGA-----CATGACTTGCGCGTGGCCCCCC------------------AAAAAAA--------TTG-TGATAAACAATCACTGACTTGCCTCCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTGT-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG-CCCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATCAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCTTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAACGAC-AGGCACAAAAA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_sylvatica_200751Bs GTAAGTTGACT-TTGCCCTGTATCGCTCGATGTATCGGATAA---CAGTTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACATACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTC-TTTTCGCCCGCGATACGAAA--------TTTTTTTTTTTTTCAG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-GTGCTAG-AGACGCAAAC--GAGAGATATAA-----CATGACATTCGCGTGACCTCCC------------------AAAAAAA--------TTG-TGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGA--CCTTTTT-CTTTCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGGGACGGAAAAAGAAGG--------AAAGAAAAAGTGTTATC--ATGCCCATCTATGTGACAG Epichloe_typhina_200736Lp GTAAGTTGACT-TTGACCTGTATCGCTCGATGTATTGGATAA---CAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAAGGTGGGCAAGCAAGCGACT---------------GCCCCTC-TTTTCGCCCGCGATACGA--------TTTTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-GTGCTAGA-GACGCAAAC--GAGAGATACAA-----CATGACATTCGCGTGATCTCCC------------------AAAAAAAA--------TG-TGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTACCCGATCTGTATCATTAACGCGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCCGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGA--CCTTTTTTCTTTGCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTACAAAAGTCTCCATTGAGCTA----CATACTGCCCTGGAGATGGGGCGGGAGAAGATGG--------AAAGGAAAAGTGTTATC--ATGCTAATCTATGTGACAG Neotyphodium_aotearoae_829 GTAAGTTGACT-TTGACCTGTATCGTTCGATGTATTGGATAA---CAGTTGCTAACTTGTCTGCTAATAGGGGTACGTACTGCAAAGTATCACTCGTCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATTCCTCTTTCACTCCACGCATAATATGTGACGTTCACTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--TGTGGGCAAGCAAGCGACT---------------GCCCCTC-TTTTCGCCCGCGATACGAA------------TTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACTTCTCAACCCGTCAC-TGGTCT-GAGCTAG-AGACGCAAAC--GAGAGACATAA-----CATGACATTCGCGTGACCTCCC------------------AAAAAAA--------TTGTTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACATATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTTTTCTTTCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGAGACGGAAAGAGAAGG--------AAAGAAAAAGTGCCATC--ATGCTAATCTATGTGACAG Neotyphodium_canariense_989Lc GTAAGTTGACT-TTGACCTGTATCGTTCGATGTATTGGATAA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTC-TTTTCGCCCGCGATACGA-----------TTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-GTGCTAG-AGACGCAAAC--GAGAGATATAA-----CATGACATTCGCGTGACCTCCC------------------AAAAAA---------CTG-TGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTACCCGATCTGTATCATTAACGCGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTCGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTTT-CTTTCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCTGCCGACCTCGAACGAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTCCAT-------------------TGAGCTA----CATACCGCCCTGAAGATGGGACGGAAAAAGAAGG--------AAAGAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Neotyphodium_coenopialum_19T GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATTA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGGAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTACCCCTC--TCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTTT-------------GCCCCTC-TTTTCGCCCGCGATACGAA----------TTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTCTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACAAGAGAGACATGA-----CATGACATTCGCGGGGCCCCCCC-----------------AAAAAAAAA------TTG-TGATAAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACTGTCATTGGTAAGCCTTGGTCGACACGTTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTCTGTCTT--GGAACCTCT-CTCCTCGACGCGTTCCGGTGTTGAGCCCCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATC-GCCGACCTCGAACGAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Neotyphodium_gansuense_818Ai GTAAGTTGACTCTTGACCTGTATCATTCGATCCATTGGATAATAACAGTTGCTAACTTGTCTGCTCACAGGGGTACGTACTGCAAAAATTCACTCGCCGTTGCCGAAATCCACATACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTATTTT---ACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCC------------CGCTATGCGACCTT--GGTGGGCAAACAACT-------------------GCCCCTC-TTTTCGGCCGCCATTTGA-------TTTTTTTTTTTTTTTT-GGGGGGGGGGGGGGCTCTCGGGGCTCAGTCTGACTTTTGGTGGGGCACC--TCAACCCCTCAC-TGGTCT-GGGCTAG-AGACGCAAACGAGAGAGACGTGA-----CAGGACATTCGCGTGGCCTTCC------------------AAAAAAAAAAAAAAATTG-TGATGACGAATCACTGACTTGCCTTCGCTCTCTAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGGCACATTATACTCTTATCAACCCGATCTGTATCATTAACATGCATTTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CATCGACGCGTTCCAGTGTTGAG--CCCCTGATTTCGTACCCCGCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AATCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTATTTCGAGAACTG-TAGCTGATCCATTTT--CTTTCCCTCT----------AGGTTCATCTTCAGACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAACGAC-AGGCAGAAACA--ACATG--AAAACTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATC-AAAAAAGTCTCCATTGAGCTG----CATACCGCTCTGGAGATGAGACGGAAAGAGAACGAAAAAAAAAAAAAAAAAGTGTTGTC--ATGCTAATCTATGTGACAG Neotyphodium_lolii GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTTGCTGACTTGTCTGCCAACAGGGGTACGTACTGCAAAATATCACTCGCCGCTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGATTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTTTACCCCTCT--CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTT--------------GCCCCTC-TTTTCGCCCGCGATACGAA---------TTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAAAAAACGCAAACGAGAAAGACATGA------------TTCGCGTGGCCCACC-TCTCCCCCCCCCCCCC-AAACAAA--------TTG-TGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATTCGCCGACCTCGAACGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Neotyphodium_occultans_999Lm GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATTA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTACCCCT----CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTTT-------------GCCCCTC-TTTTCGCCCGCGATACGAAA-----------TTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTCTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACAAGAGAGACATGA-----CATGACATTCGCGGGGGCCCCCC-----------------AAAAAAAA-------TTG-TGATAAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACTGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTCTGTCTT--GGAACCCCT-CTCCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCCCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATC-GCCGACCTCGAACAAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTTGAGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Neotyphodium_sp_1081Bpu GTAAGTTGACT-TTGACCTGTATCATTCGATGTATCGGATAA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCCTCTTTCACTTCGAGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAA----------TTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCAC-TGGTCT-AAGCTAG-AGACGCAAACGAGAGAGACATGA-----CATGACATTCGCGTGGCCTCCC------------------AAAAAAAA-------CCG-TGATGACAAATCACTGACTCGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGATCTGTATCATTAACGTGCATCTTTTAGCGCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTTT-CTTCCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTAGAACGAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTCATCATATGCTAATCTATGTGACAG Neotyphodium_sp_362Heur GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTCGCTAACTTAACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAA-------C-TTTTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCT-AAGCTAG-AGACGCAAACGAGAGAGTCATGA-----CATGACATTCGCGTGCCCTCCC------------------AAAAAAAAAA-----TTG-TGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATCTACTAGCTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGACAAAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGA--CCTTTT-CCTTCCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTTTTCATAATCT---AAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGAGACGGAAAGAGAACG--------AT--AAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Neotyphodium_sp_3635Hbr GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATAA---CAGTCGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGACATTCTTCTTTCAATTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCATCT---------------GCCCCTC-TTTTCGCCCGCGATACGAA-----------TTTTTTTTTTTCGG-------------TCGCGGGGCTCAGTCTGACTTTTGGTGGGGCTCCTCTCAACCTGTCAC-TGGTCT-AAGCTAG-AGACGCAAACGAGAGAGGCATGA-----CATGACATTCGCGTGCCCTCCC------------------AAAAAAAAA------TTG-GGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-GTCAACCTGATCTGTATCACTAACGTGCATCTACTAGTTCTCTGTTTGTCTTGGGGACCCCCT---CCTCGACGCGTTCCAGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGA--CATTTTA-CTTCCCCTCT----------AGGTTCATCTTCAAACCGGTCAGTGCGTAAGTGTGACAAATCCGCCGACCTCGAACGAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATTT---GAAGTCTCCATTGAGCTA----CATACCGCCCTGGAGATGAGACGGAAAGAGAACG--------AT--GAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Neotyphodium_sp_4074LaT GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATTA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTGCTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATAATCTTCCCCTC--TCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTTT-------------GCCCCTC-TTTTCGCCCGCGATACGAAA-----------TTTTTTTTTTCGG-------------TCGCGGGGCTCA----GACTATTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACAAGAGAGACATGA-----CATGACATTCGCGGGGCCCCCCC-----------------AAAAAAAA-------TTG-AGATAAAAAATCACTGACTTGCCTTCGCTCTCTAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACTGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTCTGTCTT--GGAAACCCT-CTCCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATC-GCCGACCTCGAACGAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATCTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCGTTGAGCTATATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Neotyphodium_sp_4078LaA GTAAGTTGACT-TTGACCTGTATCATTCGATGTATTGGATTA---CAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTGCTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATAATCTTCCCCTC--TCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACTTT-------------GCCCCTC-TTTTCGCCCGCGATACGAA-----------TTTTTTTTTTTCGG-------------TCGCGGGGCTCA----GACTATTGGTGGGGCACCTCTCAACCCGTCAC-TGGTCTTGAGCTAGAAGACGCAAACAAGAGAGACATGA-----CATGACATTCGCGGGGCCCCCCC-----------------AAAAAAAA-------TTG-AGATAAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACTGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATCTATTAGCTCTCTGTCGGTCTT--GGAACACCCTCTCCTCGACGCGTTCCGGTGTTGAG--CCCCTGATTTCGTACCCCGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGA--CCTGTTT-CTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAA--GTGACAAATC-GCCGACCTCGAACGACAAGGCACAAACA--GCATGAAAAAACTCACATTCATCTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCT---AAAGTCTCCGTTGAGCTATATACATACCGCCCCGGAGATGAGACGGAAAGAGAACG--------AAAGAAAAAGTGTTATC--ATGCTCATCCATGTGACAG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'Endophytes, tefA tubB') = N: 1-1367; CODONPOSSET CodonPositions (CHARACTERS = 'Endophytes, tefA tubB') = N: 1-1367; END; [ The following blocks are output data for analysis step 4196 ] BEGIN TREES; TITLE Tb8968; LINK TAXA = TaxaForAnalysisStep4196; TREE Fig._3 = [&R] (((((((Neotyphodium_occultans_999Lm,Neotyphodium_coenopialum_19T,(Neotyphodium_sp_4074LaT,Neotyphodium_sp_4078LaA)),Epichloe_baconii_200746At),Epichloe_sp_9924Hm,(Epichloe_amarillans_200744Ah,Epichloe_amarillans_200743So),(Epichloe_festucae_1157Kc,Epichloe_festucae_90660Frc,Neotyphodium_lolii,Epichloe_festucae_28Fl)),Epichloe_baconii_200745Cv),(Neotyphodium_gansuense_818Ai,(Epichloe_glyceriae_200755Gs,((Neotyphodium_sp_1081Bpu,Epichloe_elymi_201551Ec),(Neotyphodium_sp_3635Hbr,(Epichloe_bromicola_200749Be,(Neotyphodium_sp_362Heur,Epichloe_bromicola_201558Br))))))),(Neotyphodium_aotearoae_829,(Neotyphodium_canariense_989Lc,(Epichloe_sylvatica_200751Bs,Epichloe_typhina_200736Lp)))),Epichloe_brachyelytri); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr362] END;