#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 29, 2026; 0:17 GMT TreeBASE (cc) 1994-2008 Study reference: Friedrich M., & Tautz D. 1997. Evolution and phylogeny of the Diptera: A molecular phylogenetic analysis using 28S rDNA sequences. Systematic Biology, 46(4): 674-698. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S380] [ The following blocks are input data for analysis step 422 ] BEGIN TAXA; TITLE TaxaForAnalysisStep422; DIMENSIONS NTAX=19; TAXLABELS Aedes_albopictus Anapausis_inermis Archaeopsylla_erinacei Bolitophila_cinerea Bradysia_coprophila Chironomus_tentans Crinodiplosis_cilirus Culex_pipiens Dilophus_febrilis Drosophila_melanogaster Limonia_nebulosa Manduca_sexta Panorpa_communis Psychoda_cinerea Simulium_euryadminiculum Sylvicola_fenestralis Tabanus_sudeticus Tipula_paludosa Trichocera_regelationis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2626] TITLE Appendix_1; LINK TAXA = TaxaForAnalysisStep422; DIMENSIONS NCHAR=663; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aedes_albopictus ACTAACAAGGATTCCCTGAGTAGCTGCGAGCGAAACGGGAA-GAGCTCAGCACGCAGGGGCGATGCA-----CTGG-----TGTATCTGCCCGGTTCCGTGTACTGGAGAGTTCGTTATCTGCCGTAACCGGTCGCTG---GTTCAAGTTCAACTAGAATGTGGC-TTTTACTCCCAGAGAGGGTGATAGGCCCGTAGAGCGGCGCACCGA----TGGTA-GA-AGATCT----TTCCATGGAGTCGTGTTGCTTGATAGTGCAGCACAAAGTGGGAGGTAAACTCCTTCTAAAGCTAAATATCACCGAGCGAAAGGGAATCCGGTTACAATTCCGGAGCCTGTT-GGGTATACGTTTGCA-------------TTGGCGTCCCATACCGGCAACGGTAGCGCCTT-------TGTAATCATGGCAACATGAATCCTTTTCTTCGAGAAGCCAACAAGAGATATCGGAAGAGTTCTCTTTTCTGTTT-TACAGTCACACTAGCCATGGAAGTCTTTCATAGAGAGATATGGTTGGACAGGCTGGTAGAGCATGGTATTAAATTGCTGTGTCG-ATATTCTCTTCTTGGACCTTGAAAATCGAAGACTGGG--GCACGCAAAC---TCCCAACAGCTTGTACCG-AATCCGCAGCAGGTCTCCA Anapausis_inermis ACTAACTAGGATTCCCTGAGTAGCGGCGAGCGAAATGGGAT-AAGCTCAGCACTAAGCCTTCTGGTT----CTAAAC----GACTAGTTAGGGATGCAGTGTAT-GGAAAATCTATTATCTTATATATATACAGCATAT--GTTCAAGTCCATCTTGAATGGGGC-CA-TTTACCCAAAGAGGGTGCCAGGCCCGTAGTAACTATTGTATTA---TATAG-GA-GGATTC----TTCCAAAGAGTCGTGTTGCTTGATAGTGCAGCACAAAGTTGGTGGTAAACTCGATCTAAAGCTAAATATTACCGAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTTTGAGTATACGTTTGTTGATAAAAA-----TGGGTTCATTATATATGC---------------------ACTCATCCTGGTAACAGAAACA---ACCATAGAGAAGCCTTCGAGAAATACTGAAAGAGTTTTCTTTTCTGTTG-AACAATTGTA-TCACCATGGAAGTCTTTTACAGAGAGATATGGTGAATG-AATTGGAAGAGCATGACATTTACT-GTTGTGTCA-GTATTATCTCCTTGGACCTTGAAAATCTATGGTAGGG--CCACGCAAAC--ATCTCAACAGACCGTACCGATATCCGCAGCCGGTCTNNA Archaeopsylla_erinacei NNNNNNNNNNNNNNCCTCAGTAGCGGCGAGNGAACAGGGAA-GAGCCCAGCACTAAATCCCGCGGCCG----GAGA----CGGACCGTGGGAAATGTAGTGTTAGGGAGGATCCAATTATCTCGGTGCGTCGCGGCGA---GTTCAAGTCCATCTTGAATGGGGC-CA-TTTACCCATAGAGGGTGCCAGGCCCGTAGCGACCGTTGCGCGT---ATCGA-GA-GGATCT----CTCCTCAGAGTCGAGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAATATGACCNNNNNAAAGGGAATCCGGTTCCTATTCCGGAACCCGGCAGCGGAACCGTTTACAAGT----------CGGGCCCTCGCAAGAGA----------------------GTTCGTCGGGGTAACCCAAAAT---GACCTGGAGACGCCGTCGGGAGATACGGGGAGAGTTTTCTTTTCTGTAT-GAGCGTTCGA-GTTCCCTGGAATCCTCTAGCAGGGAGATAGGGTTTGG--AACGCGAAGAGCAC-GCAGTTGCG-GCGGTGTCC-GTATCTTCCCCTCGGACCTTGAAAATCCAGGAGAGGG--CCACG-GGAGGTGTCGCGCCGGTTCGTACCCATATCCGCAGCAGGTCTCCA Bolitophila_cinerea NNNNNCTAAGATTCCTTTAGTAGCGGCGAGCGAAACAGGAA-AAGCCCAGCACTAAGCCCTCCAGTC-----GTCCT----GGCTGGTAGGGGATGCAGTGTAT-GGGAAGTCTATTATCTTATATGACGGTAGCAC----GTTCAAGTCCATCTTGAATGGGGC-CATTTAACCCATAGAGGGTGCCAGGCCCGTAGCAACTGTTACCAG----TATAA-GA-AGATTT----TTCCGAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTTGGTGGTAAACTCCATCTAAGGCTAAATATAACCGAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGTTTGTTTATTAAAAA----TGGGTCTTATTAC--------------------------ACTCATCCTGGTAACAGGAACA---ACCATAGAGAAGCCTTCGAGAGATACTGGAAGAGTTTTCTTTTCTGTTG-AACAATCGTA-TCACCATGGAAGTCTTTCACAGAGAGATATGGTGAATG-GATTGGAAGAGCATGACATTTACT-GTTGTGTCA-GTATTTTCTCCTTGGACCTTGAAAATCTATGGTAGGG--CCACGCAAAC--ATCTCAACAGACCGTACCGATATCCGCAGCCGGTCTCCA Bradysia_coprophila ATTAACTAAGATTCCTTTAGTAGCGGCGAGCGAAACAGGAT-AAGCCCAGCACTAAGCTCTCCGGTC-----GTCCT----GACTGGTAGAGGATGCAGTGTAT-GGAAAGTCTATTATCTTATGCAACGATAATAT----GTTCAAGTCCATCTTGAATGGGGC-CATTAAACCCATAGAGGGTGCCAGGCCCGTAGCAGCTATTATCAG----TATAA-GA-AGGCTT----TTCCAAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTTGGTGGTAAACTCCATCTAAGGCTAAATATGACCAAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGTTTGTTTATTAAAAA----TGGGTCTTATTAC--------------------------ACTCATCCTGGCAACAGGAACG---ACCATAGAGAAGCCTTCGAGAGATACTGGAAGAGTTTTCTTTTCTGCTA-AACAAACGTA-CCACCATGGAAGTCTTTTATAGAGAGATATGGTGGATG-GCTTGGAAGAGCATGACATTTACT-GTTGTGTCA-GTATTTTCTCCTTGGACCTTGAAAATCTATGGTGGGG--CCACGCAAAC--TTCTCAACAGACCGTACCGATATCCGCAGCCGGTCTCCA Chironomus_tentans NNNNNNNNNNNNNCCCTTAGTAGTGGCGAACGAAACGGGAT-CAGCCCATCACGTAGGATCATAGGC-----TTAATT---GTCTATTGATCGATTCCGTGTAAAGGAGGGTCCATTATCTTGCACATATAAACATCAT--ATTTAAGTCCAGCTTGAATGCGGCTCAATATACCCACAGAGGGTGCCAGGCCCGTATATGTATGATGCTTG---TGTAA-GT-GGGCTATCAACTCCTAGGAGTCATGTTGCTTGATAGTGCAGCATTAAGTGGGAGGTAAACTCCTTCTAAGGCTAAATATTACCGAGCGAAAGGGAATACGGNTCCAATTCCGTAACCTATT-GAGTATACGTT-----------------TGTTATTTGAATTCGTTTCGAA-----------------TAACATCTCGGTAACGAGAAGCT--CTCATAGAGACGTCAATGGGAGGTATCGAAAGAGTTTTCTTTTCTGTTT-TACAATCGTACGTACCATGGAAGTCTTTCATAGAGAGATATGGTATAACAGATTGGTAGAGCATGACATTAAATTGTTGTGTCG-GTATACTCTCATTGGACCTTGAAAATCTATGAAAGGG--ACACGATAAA--TTCTCAATAGCCTGTACCCGAATCCGCAGCAGGTCTCCA Crinodiplosis_cilirus ATTAAATAAGATTCCTTTAGTAGCGGCGAGCGAAACAGGAT-TAGCCCAGCACTAAGTCATCCAATT-----TTTAT----GATTGGTATGAGATGCAGTGTAT-GGAAAGTCTATTATCTGGTGTTGTATTCAATAC---GTTCAAGTCCATCTTGAATGGGGC-CAATATATCCACAGAGGGTGCCAGGCCCGTAGAAGCTATTGTTTTG---CATCA-GA-AGGCTT----TTCCAAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAGGCTAAATATAACCGGGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGTTTGTTTATTAAAAG----TGGGTCTTGTTAC--------------------------ACTCATCCTGGCAACAGGAACA---ACCATAGAGAAGCCTTCGAGAGATATTGGAAGAGTTTTCTTTTCTGTTG-AACAATCGTA-TAACCATGGAAGTCTTTCACAGAGAGATATGGTTAATG-GATTGGAAGAACATGACATTTACT-GTTGTGTCA-ATATTTTCTCCTTGGACCTTGAAAATCTATGGTAGGG--CCANGCAAAT--TTCTCAACAGACCGTACCGATATCCGCAGCCGGTCTCCA Culex_pipiens NNNNNNN{AC}GGATTCCCCGAGTAGCTGCGAGCNAAAAGGGAA-GAGCTCAGCACGCAGGGGTGGCGC-----ACTACCC----GCGTCTACCCGGTTCCGTGTACTGGAAATTTTGTCATCTGCCATGCCCGGCGCAGT---GTCCAAGTTCAACTAGAATGTGGC-TTTTACTCCCATAGAGGGTGATAGGCCCGTAGGACGGCGCTGA------TGGTG-GA-AAATTT----TTCCATGGAGTCGTGTTGCTTGATAGTGCAGCACAAAGTGGGAGGTAAACTCCTTCTAAAGCTAAATATCACCGAGCGAAAGGGAATCCGGTTACAATTCCGGAGCCTGTT-GGGTATACGTTTGCA-------------TTGGCGGTAATACCGGTAACACGGTAGCGCCTT------TGTAATCATGGCAACATGAATCCTTTCCTTCGAGAAGCCAACAAGAGATATCGGAAGAGTTTTCTTTTCTGTTT-TACAGCCACACTGGCCATGGAAGTCTTTCATAGAGAGATATGGTCGGACAAGCTGGTAGAGCATGGTATTAAATTGCTGTGTCG-ATATTCTCTTCTTGGACCTTGAAAATCGAAGACTGGG--GCACGCAAAC---TCCCAACAGCTTGTACCG-AATCCGCAGCAGGTCTCCA Dilophus_febrilis NNNNNNNNNNNTTCCCNTAGTAGCGGCGAGCGAAACGGGAT-AAGTTCAGCACTAAGTCCTCTAA-------TTAAT------TTAG-AGGAGATTCAGTGTAT-GGAAAGTCTATTACTTTATATAAAGATGATAC----GTTCAAGTCCATCTTGAATGGGGC-CATTTAACCCGCAGAGGGTGCCAGGCCCGTAGTAACTATTATCAA----TATAAAGA-AGGCTC----TTCCAAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAATATAACCAAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGTTTGTTTATTAAAAA----TGGGTCTCGTTAC--------------------------ACTCATCCTGGTAACAGGAACA---ACCATAGAGAAGCCTTCGAGAGATACTGGAAGAGTTTTCTTTTCTGTTG-AACAATCGTA-TCACCATGGAAGTCTTTCATAGAGAGATATGGTGAATG-GATTGGAAGAGCATGACATTTACT-GTTGTGTCA-GTATTATCTCCTTGGACCTTGAAAATCTATGGTGGGG--CCACGCAAAC--ATCTNAACAGACCGTACCGATATCGGCAGCCGGTCTNNA Drosophila_melanogaster NNNNNNNNGGATTTTCTTAGTAGCGGCGAGCGAAAAGAAAA-CAGTTCAGCACTAAGTCACTTTGTC-----TATAT----GGCAAATGTGAGATGCAGTGTAT-GGAGCGTCAATATTCTAGTATGAGAAATTAACG---ATTTAAGTCCTTCTTAAATGAGGC-CA-TTTACCCATAGAGGGTGCCAGGCCCGTATAACGTTAATGAT-----TACTA-GA-TGATGT----TTCCAAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAATATAACCGAACGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATCCGTTTGTTATTAAATA-----TGGGCCTCGT-----------------------------GCTCATCCTGGCAACAGGAACG---ACCATAAAGAAGCCGTCGAGAGATATCGGAAGAGTTTTCTTTTCTGTTT-TATAGCCGTA-CTACCATGGAAGTCTTTCGCAGAGAGATATGGTAGATG-GGCTAGAAGAGCATGACATATACT-GTTGTGTCG-ATATTTTCTCCTCGGACCTTGAAAATTTATGGTGGGG--ACACGCAAAC--TTCTCAACAGGCCGTACCAATATCCGCAGCTGGTCTCCA Limonia_nebulosa NNNNNNNNAGATTCCCTGAGTAGCGGCGAGCGAAACGGGAT-AAGCCCATCACAAAGTCCTCTTTC----TTTTAAC---GAGATTGTTGGAAATGCTGTGTCAATGTGAATTCATTATCTTATATGCATATGGTAC----GCTTAAGTTCATCTTGAATGGGGC-CA-TTTACCCACAGAGGGTGCCAGGCCCGTAT-AGCTACTATTGTA---TATTA-GA-GAATTT----TGCATCAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAGGCTAAATATAACCGACCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGCTTAAAAGAT---------TGGATATTAACATGCAATGATGAAT--------------ATTCATCCTGGTAACAGGAACA---ACCATAGAGACGCTGTCGGGATATATCGAAAGAGTTTTCTTTTCTGTTT-TATAGAAGCA-TAACCATGGAAGTTTTTCGCAGAGAGATATGGTTAATA-GTCTAGAAGAGCATGACATTTACT-GTTGTGTCG-ATATTCTCCCCTCAGACCTTGAAAATCTATGGTAGGG--CTACGCAAAT---TCTCAACAGACCGTACCGATATCCGCAGCTGGTCTCCA Manduca_sexta NNNNNNNNGNATTTCCTTAGTAGCGGCGAGCGAACAGGAATATAGCCCAGCACTGAATCCCGCTGTTG----TAA------CGGCAGCGGGAGATGTGGTGTTCGGGAGGTTCCG-CTTTCTCGTCACCGATACTCCT---GTCCAAGTTCGTCTTGAACGGGGC-CG-TTTTCCCGAAGAGGGTGCCAGGCCCGTAGCGACGGAGGGCGGT---GGCGA-GA-GGGACT----CTCCTCAGAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAATATTACCGAGCGAAAGGGAATCCGGTTCCTATTCCGGAACCCGGCAGCGGAACCGTTTCAATAAT---------CGTTCCCTCGTTTAATAGCGAGT----------------GTTCGACGGGGTAACCCAAAGT---GGCCTGAAGACGCCGCCGAGAGGTCCGGGAAGAGTTTTCTTTTCTGCCT-GAGCGTTCGA-GTTCCATGGAATCCTATAGAAGGGAGATATGGTTCGG--AACGCGAAGAGCAC-GCATTTGCG-GCGGTGTCC-GGATACTCTCTGCGGACCTTGAAAATTCAGGTGAGGGATGTACGTGGAAATGTCGCGCCGGTTCGTACCCATATCNGCAGCAGGTCTCCA Panorpa_communis NCTAACTAGGATTCCCTTAGTAGCGGCGAGCGAACAGGGAA-GAGCCCAGCACTGAATCCCCTAGCCG----ATTT----CGGATAGTGGGAAATGTAGTGTATAGGAGGATTCATTTATCCTGAGATCATGTAGCGC---GTTTAAGTCCATCTTGAATGGGGC-CA-ATTACCCATAGAGGGTGCCAGGCCCGTAA-AACTGTTACTGAT---CTTGG-GA-GGATCT----CTCCTTTGAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAATATAACCGGGCGAAAGGGAATCCGGTTCCTATTCCGGAACCCGGCAGCGNAACCGTTAACAAGT----------CGGGCCCTCGAAAGAGA----------------------GTTCGTCGGGGTAACCCAAAAA---GACCTGGAGACGCCGTCGGGAGATCCAGAAAGAGTTTTCTTTTCTGTAT-GAGCATTCGA-GTTCCCTGGAATCCTTTAGCAGGGAGATAGGGTTTGG--AATGCGAAGAGCAC-GCAGTTGCG-GCGGTGTCT-GGATCTTCCCCTCGGACCTTGAAAATCCAGGAGAGGG--CCACGTGGAGGTGTCGCGCCGGTTCGTACCCATATCCGCAGCAGGTCTCCN Psychoda_cinerea ACTAACTAGGATTCCCTGAGTAGCGGCGAGCGAAACGGGAA-AAGCCCAGCACTTAGCCCATTGGCT----CATAAAC---GGCCAATTGGGGATGCAGTGTAT-GGAGTGTCCATTAACTCATTACAATAGATGATGTACGTTCAAGTCCATCTTGAATGGGGC-CATTTTACCCATAGAGGGTGCCAGGCCCGTGGAACTACCATCTGT----AATTT-GT-GGACTA----CTCTTAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAGGCTAAATATTACCGTGCGAAAGGGAATACGGTTCCAATTCCGTAACCTATT-GAGTATACGTTTATTG------------TGGGTACTGGGCCTTGCTTGCAAGTGTTCCGGTTTT---ACTCATCCTGGCAACAGAAGCT---GGCATAGAGAAGCCGTCGAAGCGTACCGAAAGAGTTTTCTTTTCTGTTT-TATAGTCGTA-TTACCATGGAAGTCTTTCGAAGAGAGATATGGTAAATG-GACTAGAAGAGCATGGCCTATATT-GCTGTGTCGCGTACGTCTTCCTCGGACCTTGAAAATCTATGCCAGGG--CCACGTAAACA-TTCTCAATAGACCGTACCAATATCCGCAGCAGGTCTCCA Simulium_euryadminiculum ACTAAATAGGATTCCCCTAGTAGCGGCGAGCGAAAAGGGAA-AAGTCCAGCACGTAGAATCGCAACT-----GTTAT----GGTTGTTGATTGATGCCGTGTACAGGTTCGGCCATTATCTCATATTATAATTAGTAT---GTTCAAGTCCTTCTTGAATGAGGC--AATATACCCACAGAGGGTGATAGGCCCGTATAACTGCTATGATA----TATGA-GA-GGTTGT----TACCTAGGAGTCGTGTTGCTTGAAAGTGCAGCACTAAGCGGGAGGTAAACTCCTTCTAAGACTAAATATTACCGAGCGAAAGGGAATCCGGTTACAATTCCGGAACCTGTT-GAGTATACGTTTGCATTATGTGACCGCCTACATTTATGTAGGTTATCCATT----------------ATGTATCTCGGCAACGAGAAGCC--AATATAAAGAAGCTATCGGGATGTAACAAAAGAGTTTTCTTTTCTGTTT-TACAGTTGTACGCACCATGGAAGTCTTTCATAGAGAGATATGGTGTAATAGGCTGGTAGAGCATGGCATTCAGTTGCTGTGTTG-TTACAATCTCCTTAGACCTTGAAAATTTATATTGGGG--TCACGCAAAC---TCTCAACAGACCGTACCG-AATCCGCAGCAGGTCTCCA Sylvicola_fenestralis NNNNNNNNGGATTCCCTTAGTAGCGGCGAGCGAAACGGGAA-AAGCCCAGCACTAAGTTCTCTAATCT----GTTGT---GGGTTAGTAGAAGATGCAGTGTAT-GGAGAGTCTACTATCTCATATGTTACGGCAATAC--GTTCAAGTCCTTCTTGAATGGGGCCCA-TTTACCCATAGAGGGTGCCAGGCCCGTAGTGACTGTTGTCCGTTTGCATGA-GA-AGACTT----CTCTTAAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTTGGTGGTAAACTCCATCTAAGGCTAAATACAACCGAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGTTTGTTTAATAAAATA---TGGGTCCCTTAGT--------------------------ACTCATCCTGGCAACAGGAACA---ACCATAGAGAAGCCTTCGAGAGGTACTGGAAGAGTTTTCTTTTCTGTTGTAACAACTGTA-TAACCATGGAAGTCTTTAAAAGAGAGATATGGTTAATG-AGTTGGAAGAGCATGACATTTATT-GTTGTGTCA-GTACTTTCTCCTTGGACCTTGAAAATCTATGGTGGGG--CCACGCAAAC--ATCTCAACAGACCGTACCGATATCCGCAGCCGGTCTCCA Tabanus_sudeticus NNNNNNNNGGATTTTCTTAGTAGCGGCGAGCGAAAAGAAAA-AAGTTCAGCACTAAGTTATTTTGTTA----TTTTT---TAACAAATATAAGATGCAGTGTAT-AGAATATCTATTATCTAGTATATTAAATTAATA---GTTCAAGTCCTTCTTAAATGGGGC-CA-TTTACCCATAGAGGGTGATAGGCCCGTAGAAACATTATTAAA----TACTA-GA-AGATAT----TTCTTAAGAGTCGTGTTGCTTGATAGTGCAGCACTAATTTGGTGGTAAACTCCATCTAAAACTAAATATAACCGAACGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-AAGTATACGTTTGTTATTAAAAAA----TGGGCTTTAAT----------------------------GCTCATCGTGGCAACACAAACA---ATCATAAAGAAACCGTCGAGAGGTATCGGAAGAGTTTTCTTTTCTGTTT-TATAGTTGTA-TTACCATGGAAGTCTTTCGAAGAGAGATATGGTAAATG-AACTAGAAGAGCATAGCATATACT-GCTGTGTCG-ATATTTTCTCCTCGGGCCTTGAAAATTTATGGTAGGG--TTACGCAAAC--TTCTTAACAGGCCGTACCAATATCCGCAGCTGGNCTCCA Tipula_paludosa NNNNNNNNAGATTTCCTGAGTAGCGGCGAGCNAAATGGGAA-AAGTCCAGCATTAAGTCCTTTTACTG----ATTACT--CGGTAGAATGGAAATTCAATGTAAAGGAGTATCTATTATCCTAAATTTTTAATTATAT---GTCCAAGTCCATCTTGAATGGGGC-CA-TTTACCCACAGAGGGTGCCAGGCCCGTAGTGACTATAATCTTG---TTTAG-GA-AGATAT----CTCTAGAGAGTCGTGTTGCTTGATAGTGCAGCACTAAGTTGGTGGTAAACTCCATCTAAGACTAAATATGACCGAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTGTACGCTTTTAAGAT---------TGGATATTAACATTTTAAGATGANT--------------ATTCATCCTGGTAACAGGAACT---GCCGTAGAGACGCCGTCGGGATATACCGAAAGAGTTTTCTTTTCTGTTT-CATAGACATA-CTACCATGGAAGTCTTTCGCAGAGAGATATGGTAAAAA-GTCTAGAAGAGCATGACATTTACT-GTTGTGTCG-GTATTCTCCCTTCGGACCTTGAAAATCTATGGAAGGG--TTACGCAAAT---TCTCAACAGACCGTACCGATATCCGCAGCTGGTCTCCA Trichocera_regelationis NNNNNNNNNGATTCCCTTAGTAGCGGCGAGCGAAACGGGAT-TAGCCCAGCACCAAGTCCTCTAGCCT----TTAAC---GGGTTAGTAGGAGATGCGGTGTATAGGTAAATCTATATTCTTATATGTTCCAATAC-----GTTCAAGTCCATCTTGAATGGGGC-CATTTAACCCATAGAGGGTGCCAGGCCCGTGGTAACTATTGTTAT----TATAA-GA-AGATTT----TGCCTTAGAGTGGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATTTAAGGCTAAATATAANNGAGCGAAAGGGAATACGGTTCCAATTCCGTAACCTGTT-GAGTATACGTTTGTTAAAT---------TGGGTTCTTTTAATTACTNTAATTAAGGT----------ACTCATCCTGGTAACAGGAACA---ACCATAGAGAAGCCGTCGAGAGATATCGGAAGAGTTTTCTTTTCTGTTT-TATAGTCGCA-TCACCATGGAAGCCTTTCGAAGAGAGATATGGTGAATT-GTCTAGAAGAGCATGGCATTTACT-GCTGTGTCG-ATATTTTCTCCTCGGACCTTGAAAATCTATGGTAGGG--CCACGCAAAT---TCTCNACAGACCGTACCGATATCCGCAGCTGGTCTCCA ; END; BEGIN ASSUMPTIONS; WTSET * saved = 10: 154-158 164-181 185-191 195-198 211-215 230-234 239-246 254-261 269-273 279-280 292-293 298-307 312-315 318-320 326-333 350-374 380-413 424-427 433-438 447-450 454-455 473-476 483-490 496-499 508-511 515-519 523-526 535-538 544-548 557-561 589-598 607-626 635 639 643-647 650-655 658 663 1-22 25-29 32-35 41-43 48-49 55-57 68-81 88 93-97 103-105 115-118 126-130 139-142 147-148 , 8: 627-634 636-638 640-642 648-649 656-657 659-662 23-24 30-31 36-40 44-47 50-54 58-67 82-87 89-92 98-102 106-114 119-125 131-138 143-146 149-153 159-163 182-184 192-194 199-210 216-229 235-238 247-253 262-268 274-278 281-291 294-297 308-311 316-317 321-325 334-349 375-379 414-423 428-432 439-446 451-453 456-472 477-482 491-495 500-507 512-514 520-522 527-534 539-543 549-556 562-588 599-606 ; WTSET saved = 8: 23-24 30-31 36-40 44-47 50-54 58-67 82-87 89-92 98-102 106-114 119-125 131-138 143-146 149-153 159-163 182-184 192-194 199-210 216-229 235-238 247-253 262-268 274-278 281-291 294-297 308-311 316-317 321-325 334-349 375-379 414-423 428-432 439-446 451-453 456-472 477-482 491-495 500-507 512-514 520-522 527-534 539-543 549-556 562-588 599-606 627-634 636-638 640-642 648-649 656-657 659-662 , 10: 1-22 25-29 32-35 41-43 48-49 55-57 68-81 88 93-97 103-105 115-118 126-130 139-142 147-148 154-158 164-181 185-191 195-198 211-215 230-234 239-246 254-261 269-273 279-280 292-293 298-307 312-315 318-320 326-333 350-374 380-413 424-427 433-438 447-450 454-455 473-476 483-490 496-499 508-511 515-519 523-526 535-538 544-548 557-561 589-598 607-626 635 639 643-647 650-655 658 663 ; END; [ The following blocks are output data for analysis step 422 ] BEGIN TREES; TITLE Tb5202; LINK TAXA = TaxaForAnalysisStep422; TREE Fig._3 = [&R] (Panorpa_communis,(Manduca_sexta,(Archaeopsylla_erinacei,((Limonia_nebulosa,Tipula_paludosa)Tipulomorpha_sensu_stricto,(Trichocera_regelationis,(((Chironomus_tentans,(Simulium_euryadminiculum,(Culex_pipiens,Aedes_albopictus)Culicidae))Culicomorpha,((Dilophus_febrilis,(Sylvicola_fenestralis,Crinodiplosis_cilirus)),(Anapausis_inermis,(Bolitophila_cinerea,Bradysia_coprophila)))Bibionomorpha_sensu_lato),(Psychoda_cinerea,(Drosophila_melanogaster,Tabanus_sudeticus)Brachycera))))Diptera))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3299] END;