#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 09, 2025; 22:39 GMT

TreeBASE (cc) 1994-2008

Study reference:
Light J., & Reed D. 2008. Multigene analysis of phylogenetic relationships and divergence
times of primate sucking lice (Phthiraptera: Anoplura). Molecular Phylogenetics
and Evolution, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S2199]

[ The following blocks are input data for analysis step 4596 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep4596;
        DIMENSIONS NTAX=12;
        TAXLABELS
            Fahrenholzia_pinnata
            Fahrenholzia_reducta
            Pedicinus_badii
            Pediculus_humanus_capitis_20
            Pediculus_humanus_capitis_23
            Pediculus_humanus_capitis_25
            Pediculus_humanus_capitis_3
            Pediculus_humanus_humanus_1
            Pediculus_humanus_humanus_3
            Pediculus_schaeffi
            Pthirus_gorillae
            Pthirus_pubis
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3377]

	TITLE Wg;
	LINK TAXA = TaxaForAnalysisStep4596;
	DIMENSIONS NCHAR=384;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       ]
[                                         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .       ]
Fahrenholzia_pinnata             ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
Fahrenholzia_reducta             TCGTGCACCGTCAAAACCTGCTGGATGAGGCTGCCGACGTTCCGGGAAATAGGCGACAGCCTCAAGGACAGATTCGACGGGGCTTCCAGGGTCATGCTGAGCAACGCCGGCAGCATGAGAGGCCTCAACTCCGGCAGGAAGAAGCGCAACAAGTACAACCTTCAGCTCAAGCCCTACGACCCTGACCACAAACCCCCTGGCACCAAGGACCTGGTCTACCTGGACCCGTCCCCCGACTTCTGCGAGCGCAACCCCAAGCTGGGAATCCAGGGCACGCACGGCCGCCAGTGCAACGACACCAGCATAGGCGTCGATGGATGCGACCTCATGTGCTGTGGCAGGGGCCACAAGACCCAGGAGATGGTCGTCACGGAGAGGTGCAGG
Pedicinus_badii                  TCTTGTACAGTCAAAACCTGTTGGATGAGGCTGCCGACTTTTCGAGAAATAGGCGACAGTTTAAAAGACAGATTTGACGGAGCTTCGAGAGTCATGCTAAGCAACGCGGGAAGCATGAGAGGATTGAACTCGGGAAGAAAGAAACGCAACAAGTATAACCTTCAGTTGAAACCGTACGATCCAGATCATAAACCTCCAGGCACAAAAGATTTAGTTTACTTGGACCCGTCACCCGATTTTTGCGAGCGAAACCCGAAATTAGGAATTCAAGGCACGCACGGTCGTCAGTGCAACGACACTAGCATAGGCGTCGACGGATGCGATTTGATGTGTTGCGGCAGAGGACACAAAACTCAAGAAATGGTTGTGACCGAAAGGTGCAGA
Pediculus_humanus_capitis_20     TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCAAGAGTCATGTTGAGCAATGCCGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATTTACAATTGAAACCCTACGATCCGGATCACAAACCGCCGGGCACGAAAGATTTGGTTTATTTGGATCCCTCACCTGATTTTTGCGAAAGGAATCCCAAATTGGGGATTCAGGGAACTCACGGTCGTCAGTGTAACGATACGAGCATAGGAGTCGATGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTCACCGAAAGGTGTAGA
Pediculus_humanus_capitis_23     TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCAAGAGTCATGTTGAGCAATGCCGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATTTACAATTGAAACCCTACGATCCGGATCACAAACCGCCGGGCACGAAAGATTTGGTTTATTTGGATCCCTCACCTGATTTTTGCGAAAGGAATCCCAAATTGGGGATTCAGGGAACTCACGGTCGTCAGTGTAACGATACGAGCATAGGAGTCGATGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTCACCGAAAGGTGTAGA
Pediculus_humanus_capitis_25     TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCAAGAGTCATGTTGAGCAATGCCGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATTTACAATTGAAACCCTACGATCCGGATCACAAACCGCCGGGCACGAAAGATTTGGTTTATTTGGATCCCTCACCTGATTTTTGCGAAAGGAATCCCAAATTGGGGATTCAGGGAACTCACGGTCGTCAGTGTAACGATACGAGCATAGGAGTCGATGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTCACCGAAAGGTGTAGA
Pediculus_humanus_capitis_3      TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCAAGAGTCATGTTGAGCAATGCAGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATTTACAATTGAAACCCTACGATCCGGATCACAAACCGCCGGGCACGAAAGATTTGGTTTATTTGGATCCCTCACCTGATTTTTGCGAAAGGAATCCCAAATTGGGGATTCAGGGAACTCACGGTCGTCAGTGTAACGATACGAGCATAGGAGTCGATGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTCACCGAAAGGTGTAGA
Pediculus_humanus_humanus_1      TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCAAGAGTCATGTTGAGCAATGCCGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATTTACAATTGAAACCCTACGATCCGGATCACAAACCGCCGGGCACGAAAGATTTGGTTTATTTGGATCCCTCACCTGATTTTTGCGAAAGGAATCCCAAATTGGGGATACAGGGAACTCACGGTCGTCAGTGTAACGATACGAGCATAGGAGTCGATGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTCACCGAAAGGTGTAGA
Pediculus_humanus_humanus_3      TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCAAGAGTCATGTTGAGCAATGCCGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATTTACAATTGAAACCCTACGATCCGGATCACAAACCGCCGGGCACGAAAGATTTGGTTTATTTGGATCCCTCACCTGATTTTTGCGAAAGGAATCCCAAATTGGGGATACAGGGAACTCACGGTCGTCAGTGTAACGATACGAGCATAGGAGTCGATGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTCACCGAAAGGTGTAGA
Pediculus_schaeffi               TCTTGTACAGTTAAAACTTGTTGGATGAGGCTACCCACTTTTCGTGAAATAGGAGATAGTTTAAAAGACAGATTCGACGGAGCATCGAGAGTAATGTTGAGCAACGCCGGAAGTATGAGATCATTGAATTCCGGTAGGAAAAAACGTAACAAATACAATCTTCAATTGAAACCCTACGATCCGGATCATAAACCTCCGGGCACAAAAGATTTGGTTTATTTGGATCCATCCCCTGATTTTTGTGAAAGAAATCCTAAATTGGGAATACAAGGAACTCACGGTCGTCAGTGTAATGATACAAGCATAGGCGTTGACGGATGCGATTTAATGTGTTGCGGTAGGGGTCACAAAACCCAAGAAATGATGGTGACCGAAAGGTGTAGA
Pthirus_gorillae                 TCTTGTACAGTGAAAACTTGTTGGATGAGGCTTCCCACCTTTCGGGAAATAGGAGATAGCTTAAAAGACAGATTCGACGGAGCTTCTAGAGTCATGCTGAGCAATGCGGGAAGCATGAGATTCTTAAACTCCGGAAGAAAGAAACGCAACAAGTATAATCTGCAATTGAAGCCTTACGATCCGGATCACAAGCCGCCGGGAACGAAGGATTTAGTCTATTTGGATCCGTCGCCGGATTTTTGCGAAAGAAATCCCAAATTGGGAATACAGGGAACTCACGGTCGTCAATGCAA{CT}GACACGAGTATAGGCGTTGACGGATGCGATTTAATGTGCTGCGGCAGAGGACACAAAACGCAAGAAATGATAGTGACCGAAAGGTGTAGA
Pthirus_pubis                    TCTTGTACAGTGAAAACTTGTTGGATGAGGCTTCCCACCTTTCGGGAAATAGGAGATAGCTTAAAAGACAGATTCGACGGAGCTTCTAGAGTCATGCTGAGCAATGCGGGAAGCATGAGATTTTTAAACTCCGGAAGAAAGAAACGTAACAAGTATAATCTGCAGTTGAAGCCTTACGATCCGGATCATAAACCGCCGGGAACGAAGGATTTAGTCTATTTGGATCCGTCCCCGGATTTTTGCGAAAGGAATCCCAAATTGGGAATACAGGGAACTCACGGTCGTCAATGCAACGACACGAGTATAGGCGTTGACGGATGCGATTTAATGTGCTGCGGCAGAGGACACAAAACGCAAGAAATGATAGTGACCGAAAGGTGTAGA
;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions (CHARACTERS = Wg) = 
		N: 1-384;
CODONPOSSET  CodonPositions (CHARACTERS = Wg) = 
		N: 1-384;
END;
[ The following blocks are output data for analysis step 4596 ]
BEGIN TREES;
      TITLE Tb9368;
      LINK TAXA = TaxaForAnalysisStep4596;
      TREE Fig._2h = [&R] (Fahrenholzia_reducta,(((((Pediculus_humanus_capitis_3,Pediculus_humanus_capitis_20,Pediculus_humanus_capitis_23,Pediculus_humanus_capitis_25),Pediculus_humanus_humanus_1,Pediculus_humanus_humanus_3),Pediculus_schaeffi),(Pthirus_pubis,Pthirus_gorillae)),Pedicinus_badii));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3138]


END;