#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 21, 2025; 8:21 GMT TreeBASE (cc) 1994-2008 Study reference: Wiklund H., Glover A., & Dahlgren T. 2009. Three new species of Ophryotrocha (Annelida; Dorvilleidae) from a whale-fall in the North East Atlantic. Zootaxa, 2228: 43-56. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10120] [ The following blocks are input data for analysis step 5288 ] BEGIN TAXA; TITLE TaxaForAnalysisStep5288; DIMENSIONS NTAX=29; TAXLABELS Dorvillea_albomaculata Dorvillea_erucaeformis Dorvillea_rubrovittata Dorvillea_similis Eunice_pennata Iphitime_hartmanae Iphitime_paguri Ophryotrocha_alborana Ophryotrocha_craigsmithi Ophryotrocha_eutrophila Ophryotrocha_geryonicola Ophryotrocha_globopalpata Ophryotrocha_gracilis Ophryotrocha_hartmanni Ophryotrocha_japonica Ophryotrocha_labronica Ophryotrocha_longidentata Ophryotrocha_maculata Ophryotrocha_notoglandulata Ophryotrocha_permanni Ophryotrocha_puerilis_puerilis Ophryotrocha_puerilis_siberti Ophryotrocha_robusta Ophryotrocha_rubra Ophryotrocha_scutellus Palpiphitime_lipovskyae Palpiphitime_lobifera Parougia_eliasoni Protodorvillea_kefersteini ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4340] TITLE H3; LINK TAXA = TaxaForAnalysisStep5288; DIMENSIONS NCHAR=336; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Dorvillea_albomaculata ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Dorvillea_erucaeformis ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Dorvillea_rubrovittata ------AAATCTACTGGAGGCAAGGCCCCAAGAAAGCAGCTGGCTACCAAGGCCGCTCGTAAGAGTGCCCCAGCCACTGGAGGAGTCAAGAAGCCCCATCGTTACAGGCCAGGTACAGTGGCTCTCCGTGAGATCAGGCGTTACCAGAAGAGCACAGAGTTGCTGATCAGGAAGCTGCCATTCCAGCGTCTGGTCCGTGAAATTGCCCAGGACTTCAAGACTGATCTGAGATTCCAGTCCTCTGCTGTCATGGCTCTGCAAGAAGCTTCTGAGGCTTACTTGGTTGGTCTCTTTGAAGACACCAACTTGTGTGCCATCCATGCCAAGCGTGTCACC Dorvillea_similis ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Eunice_pennata ---CGTAAGTCTACTGGAGGCAAGGCCCCCAGGAAGCAGCTGGCCACCAAGGCCGCTCGCAAGAGTGCCCCAGCTACTGGAGGAGTGAAGAAGCCCCATCGTTACAGGCCTGGAACAGTGGCCCTCCGTGAAATCCGTAGGTACCAGAAGAGCACTGAGCTCCTCATCCGCAAGCTGCCATTCCAGCGTCTGGTCAGGGAGATTGCCCAGGACTTCAAGACTGACCTGCGCTTCCAGAGCTCTGCTGTCATGGCCCTGCAGGAGGCTAGCGAGGCTTACTTGGTTGGTATGTTCGAGGACACCAATCTGTGTGCCATCCATGCCAAGCGT------ Iphitime_hartmanae GCTCGTAAGTCTACCGGAGGCAAAGCCCCACGAAAACAACTGGCCACCAAGGCTGCCAGGAAGAGTGCACCAGCCACCGGTGGTGTCAAGAAACCCCACCGTTACAGGCCCGGTACCGTGGCTCTCCGTGAGATCCGCCGTTACCAGAAGAGCACTGAATTGTTGATCCGCAAGCTGCCATTCCAACGTTTGGTCCGTGAGATCGCCCAGGATTTCAAGACTGACTTGCGCTTCCAGTCGTCCGCCGTCATGGCCCTGCAAGAGGCCAGCGAGGCTTACCTTGTCGGACTCTTCGAGGACACCAACTTGTGTGCCATCCACGCCAAGCGTGTCACC Iphitime_paguri ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Ophryotrocha_alborana GCTCGTAAATCTACCGGAGGCAAAGCCCCACGAAAACAATTGGCCACCAAGGCTGCCAGAAAGAGTGCACCAGCCACCGGTGGTGTCAAAAAACCACACAGATACAGGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGTTACCAGAAGAGCACAGAATTGCTCATCCGCAAGCTGCCCTTCCAACGTCTGGTCCGTGAAATCGCCCAGGACTTCAAGACCGATCTGAGATTCCAGTCTTCAGCTGTCATGGCTCTCCAAGAAGCCAGCGAGGCTTACCTCGTCGGACTCTTCGAAGACACCAACTTGTGCGCAATCCACGCCAAACGTGTCACC Ophryotrocha_craigsmithi GCTCGCAAATCTACCGGAGGCAAAGCCCCACGCAAACAGTTGGCCACCAAGGCTGCTCGCAAGAGTGCACCAGCCACCGGGGGTGTGAAGAAACCTCACAGATACAGACCCGGAACTGTCGCTCTTCGTGAGATCCGTCGTTACCAAAAGAGCACTGAGCTTCTCATCCGTAAGCTTCCCTTCCAGCGTCTGGTTCGTGAGATTGCACAAGACTTCAAGACCGACCTCCGCTTCCAGTCATCTGCCGTTATGGCTCTGCAAGAGGCCAGCGAAGCTTATCTCGTCGGACTCTTCGAGGACACCAACTTGTGCGCCATCCATGCCAAGCGTGTCACC Ophryotrocha_eutrophila GCTCGTAAATCTACCGGTGGCAAAGCGCCCCGCAAACAGCTCGCCACCAAGGCCGCTCGCAAGAGCGCGCCCGCCACCGGCGGCGTGAAGAAACCCCATAGGTACAGGCCCGGTACCGTCGCTCTCCGTGAGATCCGCCGTTACCAGAAGAGTACCGAGCTCCTCATCCGCAAGTTGCCCTTCCAACGCTTGGTGCGTGAGATCGCCCAGGACTTCAAGACCGACCTGCGCTTCCAGTCATCCGCCGTCATGGCTCTGCAGGAGGCCAGCGAGGCTTACTTGGTCGGACTCTTCGAGGATACCAACTTGTGCGCAATCCACGCCAAGCGTGTCACC Ophryotrocha_geryonicola GCTCGTAAATCTACTGGAGGCAAGGCCCCACGCAAACAATTGGCCACCAAGGCTGCCAGGAAGAGTGCTCCTGCCACCGGTGGTGTCAAGAAACCTCACAGGTACAGGCCCGGTACCGTCGCTCTCCGTGAGATCCGTCGTTACCAGAAGAGCACTGAACTGTTGATCCGCAAGCTGCCATTCCAGCGTTTAGTCCGTGAGATCGCCCAGGACTTCAAGACCGACCTGCGCTTCCAGTCCTCCGCTGTCATGGCCCTCCAGGAGGCTAGCGAGGCTTACCTCGTTGGACTGTTCGAGGACACCAATCTGTGCGCCATCCACGCCAAGCGTGTCACC Ophryotrocha_globopalpata GCCCGCAAATCTACTGGTGGCAAGGCCCCACGCAAGCAACTTGCAACCAAGGCCGCCAGGAAGAGCGCACCCGCCACTGGTGGAGTGAAGAAACCGCATAGGTACAGGCCCGGTACCGTCGCTCTTCGTGAGATCCGTCGCTACCAGAAGAGCACCGAGCTCCTGATCCGCAAGCTGCCGTTCCAGCGGTTAGTCCGTGAGATCGCACAGGATTTCAAGACCGATCTCCGCTTCCAGTCGTCTGCCGTCATGGCTCTGCAGGAGGCCAGCGAGGCTTACTTGGTCGGTCTCTTCGAGGACACCAATCTTTGCGCCATCCACGCCAAGCGTGTCAC- Ophryotrocha_gracilis GCTCGCAAATCTACCGGTGGCAAAGCGCCCCGCAAACAGTTGGCCACCAAGGCCGCCAGGAAGAGTGCCCCAGCCACTGGTGGCGTCAAGAAACCACACAGGTACAGGCCTGGAACCGTCGCCCTCCGCGAGATCCGTCGTTACCAGAAGAGCACTGAATTGTTGATCCGCAAATTGCCCTTCCAGCGCTTGGTCCGTGAGATCGCCCAGGACTTCAAGACCGACTTGCGTTTCCAATCATCTGCCGTCATGGCCCTCCAGGAGGCCAGCGAGGCTTACCTCGTCGGTTTGTTTGAGGACACCAACTTGTGCGCCATCCATGCCAAGCGTGTCACC Ophryotrocha_hartmanni ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Ophryotrocha_japonica GCCCGTAAATCCACTGGAGGCAAGGCCCCAAGGAAGCAGTTGGCCACCAAGGCCGCCAGGAAGAGTGCACCAGCCACCGGTGGCGTCAAGAAGCCACACAGGTACAGGCCTGGAACAGTCGCTCTCAGAGAGATCAGAAGATACCAGAAGAGCACTGAGCTGTTGATCCGCAAGCTGCCATTCCAGCGTCTGGTGCG{CT}GAAATTGCTCAGGACTTCAAGACCGACCTGCGCTTCCAGTCATCTGCCGTCATGGCTCTGCAGGAGGCCAGCGAGGCTTACCTCGTAGGTCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGTGTCACC Ophryotrocha_labronica GCCCGTAAATCCACTGGAGGCAAGGCCCCAAGGAAGCAGCTGGCCACCAAGGCCGCCAGGAAGAGCGCACCAGCCACCGGTGGCGTCAAGAAGCCCCACAGGTACAGGCCTGGAACAGTCGCTCTCAGAGAGATCAGAAGATACCAGAAGAGCACTGAGCTGCTCATCCGCAAGCTGCCATTCCAGCGTCTGGTGCGCGAGATCGCTCAGGACTTCAAGACTGACCTGCGCTTCCAGTCATCTGCCGTCATGGCTCTGCAGGAGGCCAGCGAGGCTTACCTCGTCGGTCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGTGTCAC- Ophryotrocha_longidentata GCACGTAAATCAACTGGTGGCAAGGCCCCACGCAAACAGCTGGCAACCAAGGCTGCCAGGAAGAGTGCACCCGCCACCGGTGGAGTGAAGAAACCTCACAGGTACAGGCCCGGTACCGTGGCTCTCCGTGAGATCCGTCGTTACCAGAAGAGCACCGAGCTGCTGATCCGCAAGCTTCCCTTCCAGCGTCTCGTCCGTGAGATCGCCCAGGACTTCAAGACCGATCTCCGCTTCCAGTCGTCCGCCGTCATGGCTCTCCAGGAGGCTAGCGAGGCCTACTTGGTCGGTCTCTTCGAGGACACGAACCTGTGCGCCATCCACGCTAAGCGTGTCACC Ophryotrocha_maculata ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Ophryotrocha_notoglandulata ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Ophryotrocha_permanni GCCCGTAAATCTACTGGAGGCAAGGCCCCAAGGAAGCAGCTGGCCACCAAGGCCGCCAGGAAGAGCGCACCAGCCACCGGTGGCGTCAAGAAGCCACACAGGTACAGGCCCGGAACAGTCGCTCTCAGAGAGATCAGAAGATACCAGAAGAGCACTGAGCTGCTCATCCGCAAGCTGCCATTCCAGCGTCTGGTGCGCGAGATCGCTCAGGACTTCAAGACTGACCTGCGCTTCCAGTCATCTGCCGTCATGGCTCTCCAGGAGGCCAGCGAGGCTTACCTCGTCGGTCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGTGTCAC- Ophryotrocha_puerilis_puerilis GCACGTAAATCTACCGGCGGCAAAGCGCCACGCAAACAGCTCGCCACCAAGGCCGCTCGCAAGAGCGCGCCTGCCACCGGCGGCGTTAAGAAGCCACACAGGTACAGGCCCGGTACCGTCGCACTCCGCGAGATCCGCCGTTACCAGAAGAGCACTGAGCTCCTCATCCGCAAGTTGCCCTTCCAGCGCTTGGTGCGTGAGATCGCCCAGGACTTCAAGACCGACCTGCGCTTCCAGTCGTCCGCCGTCATGGCTCTGCAGGAGGCCAGCGAAGCTTACTTGGTCGGCCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGTGTCACC Ophryotrocha_puerilis_siberti GCACGTAAATCTACCGGCGGCAAAGCCCCACGCAAACAGCTCGCCACCAAGGCCGCTCGCAAGAGCGCGCCTGCCACCGGCGGCGTTAAGAAGCCACACAGGTACAGGCCCGGTACCGTCGCACTCCGCGAGATCCGCCGTTACCAGAAGAGCACTGAGCTCCTCATCCGCAAGTTGCCCTTCCAGCGCTTGGTGCGTGAGATCGCCCAGGACTTCAAGACCGACCTGCGCTTCCAGTCGTCCGCCGTCATGGCTCTGCAGGAGGCCAGCGAAGCTTACTTGGTCGGCCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGTGTCACC Ophryotrocha_robusta ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Ophryotrocha_rubra GCCCGTAAATCAACTGGAGGCAAGGCCCCAAGGAAGCAGTTGGCCACCAAGGCCGCCAGGAAGAGTGCACCAGCCACCGGTGGAGTTAAGAAACCCCACAGGTACAGGCCTGGAACAGTTGCTCTCAGAGAGATCAGAAGATACCAGAAGAGCACTGAATTGTTGATCCGCAAGCTGCCATTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGACTGATCTCCGCTTCCAGTCATCTGCCGTCATGGCTCTCCAGGAGGCCAGCGAGGCTTACCTCGTCGGTCTCTTTGAGGACACCAACTTGTGCGCTATCCACGCCAAGCGTGTCACC Ophryotrocha_scutellus GCACGTAAATCTACAGGGGGCAAAGCCCCACGCAAGCAGTTGGCTACTAAAGCCGCGAGGAAGAGCGCCCCAGCTACCGGGGGTGTCAAAAAGCCTCACAGGTACAGGCCTGGAACCGTCGCTCTCCGTGAGATCCGTCGTTACCAGAAGAGTACCGAATTGTTGATCCGCAAACTGCCCTTCCAACGTTTAGTCCGCGAGATCGCCCAGGACTTCAAGACCGACTTACGTTTCCAGTCATCCGCCGTCATGGCCCTGCAGGAGGCTAGCGAGGCTTACTTGGTTGGTCTGTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGCGTCAC- Palpiphitime_lipovskyae ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Palpiphitime_lobifera GCTCGCAAATCTACCGGAGGCAAAGCTCCACGCAAACAGTTGGCCACCAAGGCCGCTCGCAAGAGCGCCCCAGCAACTGGAGGGGTCAAGAAACCACACAGATACAGGCCCGGAACTGTCGCTCTTCGTGAGATCCGTCGTTACCAAAAGAGCACCGAGCTTCTCATCCGCAAGCTCCCCTTCCAGCGTCTGGTCCGTGAGATCGCACAAGACTTCAAGACCGACCTCCGCTTCCAGTCTTCCGCCGTCATGGCTCTGCAAGAGGCCAGCGAAGCTTACCTCGTCGGACTCTTCGAGGACACCAACTTGTGCGCCATTCACGCCAAGAGAGTCACC Parougia_eliasoni GCACGTAAATCTACCGGAGGCAAGGCCCCGAGGAAGCAGCTGGCTACCAAAGCCGCGAGAAAGAGCGCACCTGCTACCGGTGGCGTGAAGAAACCCCACAGGTACAGGCCTGGCACCGTGGCTCTGCGTGAGATCCGTCGCTACCAGAAGAGCACAGAGCTGTTGATCCGCAAGCTGCCCTTCCAGCGTCTGGTCCGCGAAATTGCCCAGGACTTCAAGACTGATCTGCGGTTCCAGTCCTCTGCTGTCATGGCCCTTCAGGAGGCTAGCGAAGCTTACCTGGTCGGTCTCTTCGAGGACACCAACCTGTGCGCCATCCATGCCAAGCGTGTCAC- Protodorvillea_kefersteini ---CGTAAATCTACCGGAGGCAAGGCCCCCAGTAAACAACTGGCTACCAAGGCTGCCCGTAAGAGCGCCCCAGCCACCGGAGGAGTCAAGAAGCCCCATCGTTACAGGCCCGGAACAGTGGCTCTCCGTGAGATCCGTCGTTACCAGAAGAGCACTGAACTCCTCATCAGGAAATTGCCCTTCCAGCGTCTGGTCCGTGAAATCGCCCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCAGCTGTCATGGCTCTCCAGGAGGCTTCAGAAGCTTACTTGGTAGGTCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCGT------ ; END; BEGIN CODONS; CODONPOSSET CodonPositions (CHARACTERS = H3) = 1: 1-334\3, 2: 2-335\3, 3: 3-336\3; CODONPOSSET * CodonPositions (CHARACTERS = H3) = 1: 1-334\3, 2: 2-335\3, 3: 3-336\3; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4438] TITLE COI; LINK TAXA = TaxaForAnalysisStep5288; DIMENSIONS NCHAR=684; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Dorvillea_albomaculata ---AAAGATATTGGCACCCTTTACTTCATATTTCGTGCCTGAGCCGGCCTTTTAGGAACATCTATAAGACTTTTAATCCGAGCGGAACTCGGCCAACCTGGGTCTCTCTTAGGAAACGACCAACTTTACAACACCATTGTTACAGCTCATGCATTCCTGATGATTTTTTTCCTAGTTATACCTATGATAATCGGCGGGTTTGGTAACTGACTTCTCCCCCTAATACTAGGAGCCCCAGATATAGCTTTCCCCCGTCTTAATAACATAAGATTCTGGTTACTCCCCCCATCCCTTACTCTTCTGGTAATATCCGCGGCCGTTGAAAGAGGAGCAGGAACAGGTTGAACTGTTTACCCCCCGTTAGCGTCCAACATCGCCCATGCTGGCCCTTCTGTCGACCTTGCTATTTTCTCCCTACATCTAGCAGGAATTAGCTCAATCCTAGGAGCCCTAAACTTTATCACAACAATTTTTAACATACGTTCTAAGGGGTTACGCCTAGAACGAATACCTCTTTTTCTCTGAGCCGTAAAAATTACAGCTATCCTCCTTCTTCTATCCCTTCCTGTTCTTGCTGGGGCAATCACAATGCTTCTAACAGACCGTAACCTTAATACAGCTTTCTTCGAC------------------------------------------------------ Dorvillea_erucaeformis CACAAGGATATTGGGACACTTTATTTTATTTTTGCCGCATGAGCCGGCCTCCTCGGAACTTCTATAAGGCTCCTAATTCGTGCAGAATTAGGCCAACCTGGATCTCTTCTCGGAAATGATCAACTATATAACACTATTGTTACAGCCCATGCTTTCCTAATAATCTTTTTTTTAGTTATACCTATAATAATTGGAGGATTTGGAAACTGACTTCTCCCCCTCATGTTAGGAGCTCCAGATATAGCTTTCCCTCGACTAAACAACATAAGTTTCTGACTCCTCCCCCCTTCTCTCATCCTCCTAGTTATATCTACAGCTGTTGAAAGCGGTGCCGGGACTGGCTGAACAATCTACCCCCCCCTAGCCTCAAATATTGCCCACTCCGGGCCTTCAGTAGACTTAGCTATTTTCTCTCTTCATTTAGCCGGTATTAGCTCTATTTTAGGAGCTTTGAATTTTATTACTACAATCTTTAATATACGCTCAAAAGGATTACGACTAGAACGTGTTTCTCTCTTTGTCTGAGCCGTCAAAATCACTGCTATTCTTCTTCTTCTATCCCTCCCTGTACTCGCGGGCGCAATTACTATGCTTCTCACAGACCGAAACCTAAACACAGCTTTCTTTGACCCGGCTGGTGGGGGGGACCCTGTACTTTTCCAACATCTCTTCTGATTTTTTGGC Dorvillea_rubrovittata ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Dorvillea_similis -----------------------CTTTATTTTTGCCGCCTGAGCCGGCCTTCTCGGCACATCAATAAGCTTACTTATCCGAGCAGAATTAGGGCAACCAGGATCCCTCCTAGGGAATGACCAACTCTATAATACTATTGTCACTGCTCACGCATTTTTAATAATTTTCTTCCTTGTTATACCTATAATAATCGGCGGGTTCGGGAACTGACTTCTCCCTTTAATGTTAGGTGCCCCTGACATAGCCTTTCCTCGCCTAAATAATATAAGATTTTGACTTCTTCCCCCTGCTCTCACCCTACTAATCATATCCGCTGCTGTAGAAAATGGAGCAGGAACAGGTTGAACTGTTTATCCCCCTTTAGCAGCCAATATCGCCCATGCTGGCCCATCTGTTGATCTAGCAATTTTTTCTCTCCACCTAGCAGGAATTAGTTCTATCCTTGGAGCATTAAACTTTATCACTACAGTATTCAATATACGATCTAAAGGCTTACGCCTAGAACGTCTCCCTTTGTTTGTCTGAGCCGTTCTGATCACAGCTATCCTTCTTCTTCTATCTCTCCCGGTCCTAGCCGGAGTTATTACCATGCTTCTAACCGATCGAAACCTAAATACTTCCTTCTTTGACCCTGCTGGAGGAGGAGACCCAGTTCTTTATCAACATCTC--------------- Eunice_pennata ---------ATTGGGACAATATACCTCATCTTAGGTGTATGAGCAGGCCTCCTCGGAACTAGAATAAGGATATTAATCCGAATTGAACTGGGCCAACCAGGAGCCTATTTAGCAAATGACCAAATTTACAACGTTTTAGTAACTGCTCATGCCTTTCTAATAATTTTCTTTCTAGTAATACCAGTTTTCATCGGCGGCCTGGGCAACTGACTAGTCCCTCTCATGCTATCCGCCCCAGATATAACTTTTCCGCGTATAAATAATATAAGCTTTTGACTGCTCCCCCCCTCCCTTCTTCTACTTGTTGCATCCGCAGCAACAGAAGGGGGGGTGGGCACCGGCTGAACGGTATACCCCCCGCTATCAAACACTTTATTTCATTCAGGCCCAGCAGTTGACTTAGCCATTTTCTCTCTTCACCTTGCAGGCGTTTCATCTATTTTAGCAAGAATTAACTTTATTACTACTGCCAAAAATATGCGCCCCAAGGGTATAGTAGCTATAAAACTTCCTCTCTTTGTCTGGTCTGTAGCCATTACCGCTGTTCTTCTAGTTCTCGCCCTACCCGTCCTAGCAGCAGCTATCACAATACTTCTCACTGACCGCAATTTCAACACAACCTTTTACGACCCCATGGGGGGCGGAGACCCCATCTTATTCCAACACTTATTTTGGTTCTTCGGC Iphitime_hartmanae CATAAAGATATTGGGACATTGTACTTTTTATTAGGGATCTGAGGAGGTCTCCTAGGCACAGCTATAAGAATCCTAATCCGAGTTGAGCTTGGACAACCCGGAGCTTTCTTAGGTTCTGACCAATTGTATAATTCAATTGTAACCGCGCATGCTTTCTTAATAATTTTTTTCATAGTAATACCAATTATAGTAGGAGGGTTTGGAAACTGAATACTACCTATAATACTAGGAGCCCCCGATATAATTTTCCCACGATTAAATAACATAAGATTTTGATTTTTACCTCCCTCTTTAACATTAATAGTAATATCCACTATCGTCGAAAGAGGGCCGGGGACAGGATGGACGGTGTACCCACCATTATCTGGTAATATCTCCCATAGAGGGTCTTCAGTTGATCTCGCGATTTTTTCTCTTCACTTAGCAGGAGTTAGAAGAATTTTAGGAGCACTAAATTTTATTTCTACAATCATTAATTTACGCCCGTCTCAAATAAAATTAGAACAAATACCCCTATTTGTATGAGCTACTAAAATCACTGCTATCTTATTATTACTATCATTACCAGTCCTAGCTGGGGCTATCACAATACTGCTTACTGACCGTAATCTAAACACATCATTTTTTGATCCTAGGGGAGGGGGAGACCCAATTTTGTACCAGCATCTATTTTGATTCTTCGGA Iphitime_paguri ------GATATTGGAACTTTATATTTTTTACTTGGAACTTGAGGTGGTCTTTTGGGAACAGCTATAAGAATTCTAATTCGAGTTGAATTAGGACAACCTGGAGCTTTTTTAGGTTCAGACCAACTATTTAACTCTATTGTAACTGCTCATGCCTTTTTAATAATTTTTTTTATGGTTATACCAATTATAGTAGGGGGATTTGGTAATTGAATGCTACCTTTAATGTTAGGATCACCAGATATAATTTTTCCACGATTAAATAATATAAGGTTTTGATTTTTACCACCTTCTCTAACTTTAATAGTTATATCTACTATTGTTGAAAGAGGACCTGGTACTGGATGAACTGTATACCCACCTTTATCAAGAAATATTTCTCATAGTGGGTCATCAGTTGATTTAGCTATTTTTTCACTTCATTTAGCTGGAGTTAGTAGTATTTTAGGAGCTCTTAATTTTATTTCTACTATTATTAATTTACGTCCTAGACAAATAAAGTTAGAACAAATACCTTTATTTGTTTGAGCAACAAAAATTACTGCTATTCTTCTTTTATTATCTTTACCTGTACTTGCTGGAGCTATCACTATACTACTTACTGACCGAAATTTAAATACTAGATTTTTTGAT------------------------------------------------------ Ophryotrocha_alborana CATAAAGATATTGGAACTTTATACTTCTTACTAGGTATTTGGGGAGGATTACTGGGGTCCGCCATAAGATTTATAATCCGAATCGAACTTGGACAACCAGGAGCATTCCTGGGGAGAGACCAACTCTATAATACCATCGTAACCGCCCATGCCTTCTTAATAATTTTCTTTATAGTTATACCCGTAATAGTAGGGGGCTTTGGAAATTGGCTAGTCCCTATAATACTTGGAGCACCTGATATAGCTTTCCCGCGACTAAACAATATTAGGTTCTGGTTACTAATCCCCGCCCTCCTACTCTTAGTACTGTCAGCTACTGTGGAAGGGGGAGCAGGGACTGGTTGAACAGTTTACCCTCCCCTTTCTAGAAATCTTTCGCATAGGGGCCCTTCAGTCGACTTTGCTATTTTTTCCCTACACCTAGCAGGGATTAGATCAATCCTAGGAGCAATTAACTTTCTAATTACCTTTGCTAATATACGGCCTTCAACAATATCCTTAGAAAAAAGTTCTCTTTTTGTGTGATCAATCCAGATTACTGCCGTCCTCCTTTTACTCTCACTACCCGTACTAGCAGGTGGAATTACTATATTACTAACCGACCGTAATATTAATACCAGATTTTTTGACCCTAAGGGCGGAGGAGACCCATTACTATATCAACACTTATTTTGATTCTTCGGA Ophryotrocha_craigsmithi ---------------------------------------TGAGGTGGCCTATTAGGAACCGCCATAAGAATTCTTATTCGAGTGGAATTAGGGCAACCTGGCTCATTTTTAGGCTCAGACCAGTTGTACAACTCTATTGTTACAGCTCATGCGTTTCTTATAATTTTTTTTATAGTTATACCCGTGATAGTTGGTGGGTTTGGTAATTGAATACTACCTCTTATACTCGGAGCCCCCGACATAGCTTTCCCACGACTCAATAATATAAGATTCTGACTTCTTCCCCCTTCTCTAATCCTCCTAGTAATAAGAGCTATTGTAGAGAAAGGGGTGGGGACAGGGTGGACAGTGTACCCCCCATTATCAGGGAACATTTCACACAGAGGACCATCTGTTGACCTTGCTATTTTTTCTCTACATCTTGCCGGGATTAGGTCAATTTTAGGGGCCCTAAATTTTATTACAACTGTAGTTAATATACGATCCCCAGTAATACACTTTGAGCGTATCCCCTTATTCGTTTGATCAATTAAAATTACGGCTGTTCTCCTACTACTCTCTTTACCAGTGTTAGCTGGAGCTATCACAATACTATTAACTGATCGAAACCTTAACACTGCTTTCTTCGATCCTGCCGGTGGAGGTGATCCTGTACTATATCAACACCTCTTCTGATTCTTCGGA Ophryotrocha_eutrophila CATAAAGATATTGGTACACTTTATTTTCTATTTGGTATCTGAGGAGGACTTCTAGGAACTGCCATAAGAATGCTAATCCGAATTGAATTAGGACAACCTGGGGCATTCTTAGGGTCTGACCAACTCTATAACTCAATTGTTACAGCTCACGCCTTTTTGATAATCTTCTTTATAGTTATACCTATTATAATAGGTGGATTTGGGAATTGATTAATCCCTTTAATATTAGGTGTGCCGGACATACTGTTACCGCGGTTAAATAATATATCATTCTGGTTGCTACCCCCATCCCTACTTATACTAGTATTTTCAGCTATTGTAGAAAGGGGAGTGGGAACAGGGTGAACTGTATATCCGCCCCTAGCAAGAAATATCTCCCATAGGGGACCATCTGTTGATCTAGCAATTTTTTCACTCCACCTGGCTGGTATTAGAAGAATTTTAGGGGCCCTAAATTTTATTGCTACAATTATAAACATACGCTCTAAAGCTATACGATTAGAAAATCTACCATTGTTAATCTGAGCCCTAAAAATCACTGCTATTCTGTTACTATTATCCTTACCAGTTCTAGCCGGAGCTATTACAATACTACTGACCGATCGAAATTTAAATACCTCATTCTTTGACCCTGCAGGGGGAGGAGACCCCGTTTTATTCCAACATTTGTTCTGATTCTTCGGA Ophryotrocha_geryonicola ------GATATTGGGTTCCTTTATTTTTTATTAGGTATATGAGGTGGATTACTAGGTACAGCGATAAGAATATTAATTCGTATAGAATTGGGCCAACCAGGGATATTTCTAGGATCTGACCAAATATTTAATACTATCGTTACAGCTCACGCTTTCTTAATAATTTTCTTTCTTGTTATACCAGTGATAGTGGGAGGTTTCGGTAATTGATTAGTCCCCTTAATATTAGGTTCTCCTGATATAGCCTTCCCTCGTTTAAATAATATAAGCTTCTGACTTTTACCTCCAGCATTAACTTTACTACTTTTATCTTCTGTAGTAGAAAAGGGTGTAGGCACTGGTTGGACAGTATACCCCCCTTTATCAAGACACATTGCTCACAGGGGCCCATCAGTTGATTTAGCGATTTTTTCTTTACATTTAGCAGGGATTAGAAGAATTTTGGGAGCCTTGAATTTTATTACTACTATCCTAAACATGCGAAGAGTTAGAATAAAATTCGAACAAATCCCTTTATTTGTATGATCAATTCTAATTACAGCAGTTTTACTTCTCTTATCTCTCCCTGTATTAGCTGGAGCCATTACAATACTACTCACTGACCGCAATTTAAACACTTCCTTTTTTGATCCTAGGGGAGGGGGAGATCCTATTTTATACCAACATTTATTTTGATTCTTCGG- Ophryotrocha_globopalpata -ATAAAGATATTGGTACTTTATACTTATTATTTGGAATTTGAAGAGGTTTATTAGGATCAGCAATAAGGCTTCTAATTCGAATTGAATTGGGACAACCAGGGGCATTCCTTGGAAATGACCAATTATACAATTCAATTGTAACCGCTCACGGATTTTTAATAATTTTCTTCATAGTAATACCTATGGCTATTGGTGGTTTTGGGAATTGATTAGTCCCTTTAATATTAAACGCACCTGATATAGCTTTCCCCCGATTAAATAACATAAGATTTTGGTTACTCCCTCCTTCTTTATCTTTACTAATTATATCAGCTATAGTAGAAAGAGGCTCAGGTACCGGATGAACAGTTTACCCTCCTTTATCAGGAAATTTATCCCATAGAGGTGCTTCAGTAGATCTTTGTATTTTTTCATTACATCTAGCTGGAATTAGATCCATTTTAGGAGCCCTAAACTTTATTACAACAATTATTAATATACGTTCTCACACTATACGATTAGAACGAATACCTTTATTCGTTTGATCTGTTCAAATTACAGCAGTTTTATTATTATTATCTCTTCCTGTTTTAGCAGGAGCTTTAACAATACTTCTTACTGATCGAAACTTAAATACATCTTTCTTTGACCCTGCTGGAGGAGGAGATCCTGTATTATACCAACATTTATTTTGATTCTTCGGA Ophryotrocha_gracilis ---CAAGATATTGGTTCACTTTACTTTATTCTGGGGACGTGGGGGGGTCTTTTAGGAACGGGTATGAGAATATTAATCCGGATCGAACTGGGACAACCGGGTGCCTTTTTGGGTTCAGACCAGCTATTTAATTCTATTGTAACAGCACATGCTTTTCTGATAATCTTTTTTATGGTGATACCTGTTATAGTGGGTGGTTTCGGAAATTGACTAATCCCCCTATTTTTAGGTGCCCCAGATATAGCCTTCCCTCGCCTAAATAATCTAAGGTTTTGACTTCTACCCCCCTCTCTCTCCCTCCTTGTCGCTTCTGCTATTGTCGAAAGGGGGGTGGGGACAGGTTGGACGGTATACCCCCCCCTTTCTAGAAACATCTCCCACAGGGGGCCGAGAGTAGATTTAGCCATTTTTTCACTACATTTGGCTGGTGTAAGGAGAATTTTAGGAGCGCTAAACTTCATTTCTACAATCATAAATATACGTGCCCCAGGTTTAAACTTCGAACGAAACCCTTTATTTATTTGAGCCTCCTTAATCACAGGAGTTCTCTTACTACTTTCATTACCAGTGTTAGCAGGAGCCATTACTATACTACTCACTGACCGGAATATTAATACTAGGTTTTTTGAC------------------------------------------------------ Ophryotrocha_hartmanni ---CCAGATATTGGAACATTGTATTTTCTTTTCGGAATTTGGGGCGGACTCTTAGGTACTGCCATAAGAATCCTAATCCGAATCGAACTGGGTCAACCTGGTGCCTTTTTGGGATCAGACCAGCTTTTTAACTCAATTGTCACGGCTCACGCCTTTTTGATAATTTTCTTCATAGTAATACCTGTAATAATTGGGGGATTCGGGAATTGGTTAATCCCTCTAATGCTGGGGGTGCCTGATATAGCTTTCCCACGTCTAAACAATATGAGGTTCTGGTTATTACCACCCTCTTTAACCCTGTTAGTTATATCAGCTATTGTCGAAAAGGGGGTAGGAACAGGGTGAACAGTATACCCCCCCCTGTCTAGTAATATCTCTCATAGTGGGCCCAGGGTAGATTTAGCTATTTTTTCTCTCCACCTAGCCGGGATCAGAAGAATCCTGGGTGCTTTAAATTTCATTACCACAATTATAAACATACGAGCACCAGCTATACGTCTGGAACGAATCCCGTTATTCCTGTGAGCTGCTTTAATCACAACAGTGCTCTTACTTTTATCTCTCCCAGTCTTAGCCGGGGCGATTACAATACTCCTGACTGACCGTAACTTAAATACCAGCTTCTTTGAT------------------------------------------------------ Ophryotrocha_japonica CATAAAGATATTGGTACTTTGTACTTCCTTTTGGGTATTTGGGGGGGTTTGTTGGGGACCGGTATAAGTATATTAATTCGTGTTGAGTTGGGCCAACCAGGTAGATTTTTAGGGTCAGACCAACTTTATAACAGCATTGTAACAGCTCATGCATTTTTAATAATTTTTTTTATGGTTATACCTGTTATAGTAGGGGGTTTTGGTAATTGACTGCTGCCTCTAATAATAGGGTGCCCTGATATGCTTTACCCGCGATTGAATAATATAAGGTTTTGGTTGCTACCCCCTTCTATTAGGTTGCTTTTTTTCTCTCTAGTAGTGAATCAAGGGGTGGGGACTGGTTGAACTGTGTACCCCCCGCTTTCTAGAAGCATGAGGCATAGGGGGTCTTCTGTGGATTTAGCTATTTTTTCCCTACATTTGGCAGGGGTGAGTTCTATTCTGGGGGCTGTAAATTTTATTGGCACAGTGTCAAATATGGGACGGAAGGTATTTTCTTTTGAGAAAATACCTTTGTTTGTTTGAAGGATCTTAATTACCGCTTTCTTGTTGCTTCTTTCTATACCAGTGTTAGCTGCTGGCATTACTATATTATTAACTGATCGTAATTTAAACACTTCCTTTTTTGACCCCTCGGGGGGTGGTGATCCGGTGTTGTTCCAACACTTGTTCTGATTCTTCGGA Ophryotrocha_labronica CATAAAGATATTGGGACTTTATACTTTCTTTTAGGGATTTGGGGGGGTTTATTGGGAACTGGAATGAGGATGTTGATTCGAGTTGAATTAGGTCAACCAGGATCATTTTTAGGGTCTGATCAGTTGTATAATAGAATTGTTACTGCTCATGCTTTTCTTATAATTTTTTTTATAGTAATACCAGTAATAGTAGGAGGGTTTGGAAATTGACTTTTACCTTTAATGATAGGGTGCCCTGATATACTCTACCCCCGGCTGAATAATATAAGGTTTTGGCTTTTACCTCCTTCAATTAGACTACTTGTTTTTTCTATAATTGTAAATCAAGGTGTGGGGACGGGGTGGACGGTTTACCCTCCTTTATCTAGGAGGATGAGGCATAGAGGATCTTCTGTTGATTTAGCTATTTTTTCTTTACATTTAGCTGGGGTTAGATCCATTTTGGGGGCTGTAAATTTTATTGGTACAGTGGCTAATATAGGCCGTAAAGTGTTTTCTTTTGAGAAAATACCATTATTTGTATGAAGAATTTTAATTACCGCATTTTTACTTTTACTATCAATACCAGTTTTAGCGGCTGGGATTACTATGTTATTAACTGATCGTAATTTAAATACTTCATTTTTTGACCCTTCCGGAGGCGGTGATCCCGTACTATTTCAACATTTATTTTGATTCTTCGGA Ophryotrocha_longidentata CATAAAGATATTGGTACATTATATTTATTATTTGGCCTTTGAGGAGGATTATTAGGATCTGCTATAAGATTCATAATTCGAATTGAATTAGGTCAACCCGGTGCTTTTTTAGGAAATGATCAATTATATAATTCTATTGTAACTGCACATGCATTTTTAATAATTTTTTTTATAGTAATACCTATAGCTATTGGGGGATTTGGAAATTGACTAGTCCCCTTAATACTAGATGCCCCAGATATAGCTTTCCCACGATTGAATAATATAAGATTTTGACTATTACCACCTTCTCTCACTCTACTAGTAATATCAGCAGCAGTAGAAAGAGGTGCAGGAACAGGGTGAACAGTATACCCTCCATTATCAAGAAATTTATCTCATAGAGGGGCCTCAGTAGATTTAGCTATTTTCTCTCTTCATTTAGCAGGGATTAGATCTATTTTAGGAGCTTTAAATTTTATTACTACTGTAATTAATATACGTTCGCATGCTATACGTTTAGAACGAATACCTTTATTTGTATGAGCAGTACAAATTACAGCTATTTTATTACTATTATCTTTACCTGTTTTAGCTGGTGCATTAACTATACTATTAACAGATCGTAATCTAAATACTTCATTCTTTGACCCTGCTGGAGGAGGTGATCCAGTACTTTACCAACATTTATTTTGATTCTTC--- Ophryotrocha_maculata ------------------------------------------GGGGGCCTTTTAGGCACTGCTAT{AC}AGTATACTAATCCGAATTGAATTAGGACAACCCGGTGCA{CT}TCTTAGGTTCTGACCAACTATTTAACTCTATTGTAACAGCTCATGCTTTTTTAATAATTTTTTTTATAGTGATACCTGTAATAATCGGTGGATTCGGAAACTGACTTATCCCACTAATGTTAGGAGTCCCTGACATAGCTTTCCCACGATTAAACAATATAAGTTTCTGGCTATTACCCCCTTCTTTAACGATACTTGTTATATCAGCTATTGTAGAAAAGGGGGCTGGGACAGGTTGGACGGTATACCCTCCCCTATCTAACAATATCTCTCACAGAGGGCCTAGAGTAGATTTAGCAATTTTTTCTTTACACTTAGCAGGTATTAGAAGAATTCTGGGAGCCCTCAACTTTATCACCACAATTATAAACATACGAGCCCCGGCTATACAACTAGAACGAATTCCCTTATTCTTATGGGCTGCTTTAATCACAACTGTACTTTTACTACTTTCTCTGCCTGTCCTAGCGGGGG{CG}TATTACGATACTTTTAACAGACCGGAATTTAAATACTAGCTTTTTTGATCCTTCGGGGGGTGGAGACCCTATTTTGTACCAACACTTATTCTGATTCTTCGGA Ophryotrocha_notoglandulata ---AAAGATATTGGTACTTTGTATTTCCTTTTGGGTATTTGGGGGGGTTTGTTGGGGACCGGTATAAGTATACTAATTCGTGTTGAGTTGGGCCAACCAGGTAGATTTTTAGGGTCAGACCAACTTTATAACAGTATTGTGACAGCTCACGCATTTTTAATAATTTTTTTCATGGTTATACCTGTTATAGTGGGGGGTTTTGGTAATTGATTGCTACCTTTAATAATAGGGTGCCCTGATATGCTTTACCCTCGGTTGAATAATATAAGGTTTTGGCTGCTCCCCCCTTCTATTAGGTTGCTTTTTTTCTCTTTAGTGGTGAACCAAGGGGTGGGGACTGGTTGAACTGTGTACCCGCCGCTTTCTAGAAGCATGAGACATAGAGGGTCTTCTGTGGATTTAGCTATTTTTTCCCTACATTTGGCAGGGGTAAGGTCTATTCTGGGGGCTGTAAATTTTATTGGTACAGTGTCAAATATGGGACGAAAAGTATTTTCTTTTGAGAAAATACCTTTGTTTGTTTGAAGGATTTTAATTACCGCTTTTTTGTTGCTTCTTTCTATACCAGTGTTAGCTGCTGGCATTACTATATTATTGACTGATCGTAATTTAAATACTTCCTTTTTCGAC------------------------------------------------------ Ophryotrocha_permanni CATAAAGATATTGGCACTTTATACTTTATTTTGGGGATTTGGGGTGGCTTATTGGGTACTGGGATAAGGATATTAATTCGTGTAGAGTTGGGTCAACCTGGGTCTTTTTTAGGCTCTGACCAACTTTATAATAGAATTGTAACTGCTCATGCTTTTTTAATAATTTTTTTCATAGTGATACCTGTGATAGTAGGGGGATTTGGTAATTGATTGTTGCCTCTTATAATAGGTTGTCCAGATATACTTTATCCTCGACTTAATAATATGAGATTTTGGTTATTACCTCCCTCTATTAGGTTGTTAGTATGTTCTATAATTGTAAATCAAGGTGTAGGGACTGGTTGAACGGTTTACCCTCCTCTATCAAGGAGAGTTAGACATAGCGGGTCGTCTGTAGATTTAGCCATTTTTTCACTCCATTTGGCTGGGATTAGGTCTATTTTAGGGGCAGTAAATTTTATTGGAACTGTAGCTAATATGGGACGCAAGGTATTCTCTTTTGAGAAGATACCTTTGTTTGTTTGAAGGGTTTTAATTACAGCTTTTCTTCTACTTCTTTCAATACCTGTATTAGCCGCTGGGATCACCATACTATTAACAGATCGAAATCTTAATACCTCCTTTTTTGATCCATCGGGGGGGGGAGATCCTATTTTATTTCAACATTTATTTTGATTCTTCGGA Ophryotrocha_puerilis_puerilis ---------------------------------------TGAGGTGGTCTTCTGGGTACTGCTATAAGTATGCTAATCCGAATTGAGTTAGGCCAACCAGGTGCATTCCTAGGCTCTGACCAACTTTATAATTCTGTTGTTACTGCCCACGCCTTCTTAATGATTTTTTTCATGGTTATGCCTATTATGATAGGGGGTTTTGGTAATTGACTAATCCCCCTAATGCTGGGTGTACCGGATATGCTCCTCCCCCGCCTTAACAACATATCCTTCTGATTATTGCCCCCCTCACTGTTGATATTAATCTTTTCAGCAATCGTTGAAAGGGGTGTTGGCACTGGCTGAACTGTGTATCCCCCCCTTTCGAGGAATATCTCCCACAGGGGCCCATCCGTTGATCTCGCCATCTTCTCCCTACACCTAGCTGGCATTAGTAGTATTTTAGGGGCGCTAAATTTTATTGCCACAATTATAAACATACGCTCAAAGGCCATACGGTTAGAGAATTTACCCCTTCTGATATGAGCGCTAAAAATCACAGCCATCTTGTTGCTTTTATCTCTGCCTGTCTTAGCCGGGGCTATTACAATACTGTTAACAGATCGAAACTTAAATACCTCATTTTTTGACCCGGCTGGGGGTGGAGACCCC--------------------------------- Ophryotrocha_puerilis_siberti ---------------------------------------TGAGGGGGTCTACTCGGTACCGCTATGAGTATATTAATTCGAATCGAGCTGGGTCAGCCAGGGGCTTTCCTGGGATCTGACCAGTTATATAACTCAGTAGTCACTGCCCATGCCTTTTTAATAATTTTCTTCATGGTGATACCTATCATGATAGGAGGTTTTGGAAATTGGCTTATCCCGCTAATATTAGGTGTACCCGATATGCTACTACCCCGCCTTAACAACATATCCTTTTGGTTGCTACCCCCATCCCTCTTGATGCTGGTCTTTTCTGCCATCGTTGAAAGGGGTGTGGGAACTGGTTGGACTGTGTATCCCCCTCTTTCAAGGAATATCTCCCATAGGGGTCCTTCAGTCGACCTTGCAATCTTCTCATTACACCTAGCTGGTATCAGAAGTATTTTAGGGGCCCTAAATTTTATTGCAACCATTATAAACATGCGCTCAAAAGCTATGCGGTTAGAAAACCTACCACTCCTTATATGGGCACTAAAAATTACTGCTATCTTGCTGTTACTATCTCTACCAGTATTAGCCGGAGCTATTACAATGTTACTAACAGATCGCAACTTAAACACATCTTTCTTTGACCCGGCTGGCGGGGGAGACCCT--------------------------------- Ophryotrocha_robusta ---AAAGATATTGGGACTCTTTACTTCATTTTAGGAATTTGGGGGGGAATATTGGGGACAGGAATAAGGATGTTAATCCGGGTGGAGTTAGGTCAGCCAGGCTATTTTTTGGCTCAAGACCAGTTGTTTAATAGAATTGTTACTGCTCATGCCTTTTTAATAATTTTTTTTATGGTGATACCTATTATAGTGGGGGGTTTTGGTAATTGGCTGTTACCTATAATATTAGCTGTTCCTGATATATATTACCCTCGTCTTAATAACATAAGATTTTGATTTTTACCCCCAGCTTTAGGGTTATTAGTAATATCTTCAATTGTAGAGAAGGGAGCTGGGACAGGGTGGACTGTCTACCCCCCCTTGTCTTCAAGGGTTGCTCATAGAGGACCCTCAGTTGACTTTGCTATTTTTTCCCTACATTTAGCGGGTATTAGTTCTATTTTAGGATCTCTAAATTTTATTAGAACTATTTTTAATGCTAAAGGGGAGAAAATCAAATTTCATATATTACCTCTTTTTATTTGGGCTACAAAAGTGACTGCGTTCCTATTATTACTCTCGTTACCAGTGTTAGCTGGGGGGATTACCATGTTGTTAACTGACCGAAACCTTAATACTTCGTTTTTTGAC------------------------------------------------------ Ophryotrocha_rubra CATAAAGATATTGGTACCATATACCTAATAATTGGTATATGGGGAGGTTTTATTGGAACTGGTTTTAGGATATTAATTCGTGCTGAATTGGCCCAACCTGGCCCTTTTATGGGGTCAGACCAGTTGTATAATAGAATTGTAACTGCTCACGCCTTTTTAATGATTTTTTTTATAGTAATACCTGTAATAGTGGGGGGTTTCGGAAATTGGCTTCTTCCGATTATATTGGGTACACCTGATATATATTTCCCTCGATTAAATAATATAAGATTTTGGTTATTAGTCCCCTCTTTAATCTTATTAACGGGGTCTACTTTGGTAGAAAGGGGAGCTGGAACTGGGTGGACTGTTTACCCCCCTTTATCTGGGGGGAGTTTTCACAGAGGGCCTAGTGTGGATTTGGTCATCTTTTCCCTACATTTAGCAGGGGTGAGATCTATTCTTGGTGCCATTAATTTTATAAGGACGGTTGGTTTTATACGTATAGAAGCGTATAGAATGGATAAAATCCCTATATTTGTATGGGCAAGGCTTATTACAGCGGTTTTATTATTGCTATCTATGCCGGTATTGGCGGGCGCTATTACTATGTTATTAACCGATCGAAATTTAAACACAACTTTTTTTGAACCTTCTGGGGGAGGTGACCCGGTGTTGTACCAACACTTGTTTTGATTCTTCGGA Ophryotrocha_scutellus ------------------------------CTCAGTATCTGGGGTGGTCTACTAGGTAGAGCTATAAGGATACTAATTCGAGTAGAACTGGGGCAACCCGGAGCATACTTGGGTTCAGATCAATTATATAACTCTATTGTAACTGCCCATGCCTTCCTAATAATTTTCTTCATAGTAATACCTGTAATGGTTGGAGGATTTGGTAATTGATTAGTTCCTGGTATACTAGCCGTTCCAGACATGGCTTTCCCACGACTAAACAACATAAGATTCTGAATACTACCACCCTCACTAACTCTAATAGTCTCGTCTACTATCGTAGA{AG}AGAGGCCCTGGAACAGGGTGGACAGTTTACCCCCCTTTATCAAGAAGCATTTCTCACAGTGGACCCTCTGTTGACCTTGCAATTTTTTCTCTACATCTAGCCGGTATTAGTAGGATTTTAGGTGCAATTAACTTTATTGTAACAATCGTTAACTTACGAAACCCAGCTGTTCATTTAGAGCGAATTTCTCTATTTGTCTGAGCTATCTTTATTACAGCAGTATTATTA{CT}TACTTTCCCTCCCAGTATTAGCTGGGGCTATCACTATGCTTTTAACAGACCGAAATCTAAACACTTCCTTTTATGACCCAG-------------------------------------------------- Palpiphitime_lipovskyae CATAAAGATATTGGAACTTTATACTTTCTATTTGGAATTTGAGGGGGACTCCTAGGAACCGCTATAAGAATTCTTATTCGTGTTGAATTAGGACAACCTGGAGCTTTTCTAGGATCTGATCAATTATATAACTCTATTGTTACAGCTCATGCTTTTCTTATAATTTTCTTCATAGTAATACCTGTAATAGTGGGTGGATTTGGAAATTGAATACTTCCATTAATATTAGGAGCACCAGATATAGCTTTTCCTCGACTTAATAATATAAGATTTTGATTACTACCCCCATCTCTTATTTTATTAGTAATAAGAGCTATTGTTGAAAAAGGTGTTGGAACAGGGTGAACTATTTACCCACCTTTATCTGGAAACATTTCTCATAGTGGACCCTCTGTAGACCTAGCCATTTTCTCCCTTCATTTAGCGGGAATCAGATCAATTTTAGGGGCCTTAAATTTTATTACAACTGTAATCAATATACGCTCTCCTGTAATACATTTTGAACGTATTCCTTTATTTGTTTGATCAATTAAAATTACAGCTGTCCTACTTTTACTTTCTCTACCCGTATTAGCTGGAGCAATCACTATACTTTTAACAGATCGAAATTTAAATACAGCCTTTTTTGACCCTGCTGGAGGTGGAGACCCTGTTCTCTATCAACATTTATTTTGATTCTTCGGA Palpiphitime_lobifera CATAAAGATATTGGAACCCTTTATTTTTTATTTGGAATTTGAGGAGGACTACTAGGAACAGCAATAAGAATCCTTATTCGTGTAGAACTAGGTCAACCTGGATCTTTTTTAGGGTCAGATCAACTATATAATTCTATTGTAACTGCACACGCATTTTTAATAATTTTCTTTATAGTTATACCAGTTATAGTTGGAGGATTTGGAAATTGACTACTTCCCCTAATATTAGGAGCCCCAGATATAGCATTCCCTCGACTTAATAATATAAGATTTTGACTACTCCCCCCCTCCCTTATCCTTCTTGTAATAAGAGCAATTGTAGAAAAGGGGGTGGGAACAGGGTGAACAGTTTACCCTCCACTATCAAGAAATATCTCCCATAGAGGCCCCTCTGTTGATTTAGCAATCTTTTCTCTTCATTTAGCTGGAATTAGGTCAATTTTAGGAGCCCTAAACTTTATTACTACTGTAATTAATATACGATCTCCAGTAATACACTTTGAACGTATCCCTTTATTTGTTTGATCTGTAAAAATTACAGCAGTTCTACTTCTTTTATCTCTACCAGTATTGGCCGGTGCTATTACTATACTACTAACCGATCGAAACCTTAATACCGCTTTCTTTGATCCCGCTGGAGGAGGAGACCCCATTTTATATCAACATTTATTTTGATTCTTCGGA Parougia_eliasoni CATAAAGATATTGGAACTTTATATCTTTTATTTGGTGCTTGAGGTGGTCTCCTTGGAACAAGAATAAGACTTATAATTCGAGTAGAATTGGGGCAACCTGGGAGATTTATAAATAATGACCAATTATATAATACTATTGTTACTGCTCACGCATTCTTAATAATTTTTTTTTTAGTAATACCTGTAATAATTGGGGGATTCGGAAATTGATTAGTCCCATTAATATTAGGCGCACCTGATATAGCATTCCCTCGATTAAACAATATAAGATTTTGGCTACTTCCTCCTTCCTTATCTCTTCTTGTTATATCTGCAATTGTAGAAAAAGGAGTAGGAACTGGATGAACAGTTTACCCTCCTCTATCTAGTAATATTTCTCACGCAGGTCCTTCAGTAGATCTCGCTATTTTTTCTCTCCATTTAGCGGGAGTCAGATCTATTTTAGGTGCATTAAACTTTATCACAACTATTATTAATATACGGTTTAATGGTATACGTTTAGAACGAATTCCTCTTTTTGTTTGGTCAGTAAAAATTACTGCTGTTCTTCTCCTTCTATCACTTCCTGTTCTAGCAGGAGGAATTACTATACTTTTAACAGACCGTAATTTAAACACCACATTCTTCGACCCGGCTGGGGGAGGTGATCCTATTCTCTATCAACATTTATTTTGATTCTTCGGA Protodorvillea_kefersteini ---------------------------------------TGAGCCGGCCTTCTAGGCACCTCCATAAGTCTTCTTATCCGAGCTGAACTAGGTCAACCAGGATCCCTCCTAGTAAATGACCAACTCTATAACACTATTGTTACCGCCCATGCCTTTACCATAATTTTCTTCTTAGTAATACCAGTAATAATTGGAGGATTTGGCAACTGACTACTCCCTCTTATACTGGGTGCCCCAGATATATCATTCCCACGTCTTAATAACATAAGCTTCTGGTTACTCCCACCTTCTCTAGCCCTCCTCACTATATCAGCTATTGTAGAAAAAGGAGCAGGAACTGGCTGAACTGTATACCCCCCCTTAGCAGGAAACATTGCTCACTCTGGCCCATCAGTAGATATAGCCATCTTTTCCCTCCATCTGGCCGGAATCAGGTCAATTCTAGGAGCCCTTAATTTTATTACTACTATCATTAACATACGAATACAAGGTATACGTCTTGAACGAGTACCCCTATTCGTCTGAGCAGTAATAATTACCGCCTTCCTACTTCTCTTATCCCTCCCAGTTCTAGCCGGCGCAATCACTATGCTGTTAACAGACCGAAATCTAAACACATCTTTCTTTGATCCCGCTGGCGGAGGAGACCCAATC------------------------------ ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = COI) = 1: 1-682\3, 2: 2-683\3, 3: 3-684\3; CODONPOSSET CodonPositions (CHARACTERS = COI) = 1: 1-682\3, 2: 2-683\3, 3: 3-684\3; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4537] TITLE 16S_rDNA; LINK TAXA = TaxaForAnalysisStep5288; DIMENSIONS NCHAR=549; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Dorvillea_albomaculata ---------------------------------------------------CCTGCCCAGTG-AACTC---TTCAACGGCCGCGGT----TAAACGTGCAAAGGTAGCATAATCAATCGTCCTTTAATTGTGGACTAGAATGAATGGATAAATAAAAATTAATCTATATAATTTTTAACAATAAAAATTTACCTTTAGATGAAAAGGTCTAAATAAAAATAAAAGACCAGAAGACCCTATAGAGCTTTTTCTTAAAACAAT-----------------AAACATATTGATAATAAGATTTGGTTGGGGCAACCAAGGAA----TAACTATCCTTAAATCACAACGATATATAAATTAAACCTATAATAAATATATTT----------AAGCTACCTTAGGGATAACAGGCTAATCTTATTTTATAGTCCACATACACAATAAGGTTTGGCACCTCGATGTTGGCTTGAGATCACTTTAAA-ATGTAGACGTTTTAAATAGTAGGCTTGTTCAGCCTTAAAAATCTCACG-------------------- Dorvillea_erucaeformis -------------CAAAACATAGCTCTCAGGCCCCCCATTGAGAGTGT-TTCCTGCCCAGTG-ATTTAT--TTTAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATAATTTGCCTCTTAATTAGTGGCTAGTATGAATGGAAGCACGTGGTTTCAACTTTTACAGTTTTACCCCTAAAACCTATCCTTTAGGTGAAGAGACCTAAATCCAAATAAAGGACAAGAAGACCCTGTCGAGCTTTATAAGGGCTTTTCA----------------CATATGAAATTTACACTTATTTGGTTGGGGCGACCTGAGAACATAATAAACTTCTCTCAATCCCTAGATTTAAGTATCATAATAACGACCCCCCCATGGTCTCTAACT-AAGCTACCGCAGGGATAACAGGCTAATCCTCCTTAAGAGCCCAAATTGACAGGAGGGTTTGGCACCTCGATGTTGGCTTAAGATACCCATTTA-TCGCAAAAGATAAAAAAGGTAGGCTTGTTCAGCCTTTAAAATCTTACGTGATCTGAGTTCAGACCGG- Dorvillea_rubrovittata -------------AAAAACATAGCTCTTAGAACTCCAATTAAGAGTAT-TTCCTGCCCAGTG-AATTTA--TTCAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATAATTTGCCTCTTAATTAGTGGCTAGTATGAATGGAAGCACGTGGTTTCAGCTATTACGGACGCAACCATAAAACCTATCCTTTAGGTGAAGAGACCTAAATTTTAATAAAGGACAAGAAGACCCTGTCGAGCTTTATAGGCACCTTT------------------CTTAAAGAAATAAACCTTATTTGGTTGGGGCGACCCGAGAACACATCTAACTTCTCATAAAATCAAGATTGAAACATCATTACAATGACCCTCCCATGTCATCTAAA--AAGCTACCGCAGGGATAACAGGCTAATCCTCCTTAAGAGCCCAAATTGACAGGAGGGTTTGGCACCTCGATGTTGGCTTAAGATCCCCCTTTA-TCGCAGACGTTAAAACTGGTAGGCTTGTTCAGCCTTTAAAATCTTACGTGATCTGAG----------- Dorvillea_similis ---------------------AGCTTTTAGTTTTATTATTAAAAGTAT-CTCCTGCCCAGTG-ACTTTATGTTTAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCATAATAACTTGCCTCTTAATTAGTGGCTAGAATGAACGGATCTACGTAGCTACTCCTCTAACATGCTTACCCTTAAAAATTATCCTTTAGGTGAAGAGACCTAAATAAAAATAAAGGACAAGAAGACCCTGTCGAGCTTTATGAAAACTAA-------------------GTTACTTTACCTACTATCATTTGGTTGGGGCGACCAGAGAACAAGTCTAACTTCTCCTTACCCAAAAGAATAAACCTTCTTTAATAAAAACCTTTAAAGTATTTTAAC-AAGCTACCGCAGGGATAACAGGCTAATTCTTCTTAAGAGCCCAAATTGACAGAAGAGTTTGGCACCTCGATGTTGGCTTAAGACATCCCTTTA-TTGCAGAAATTAAAAACGGTAGGCTTGTTCAGCCTTTAATGTCTT----------------------- Eunice_pennata -------------------------------------------------------CCCAGTG-ACCAAG--TTCAACGGCCGCGGTACCCTGACCGTGCAAAGGTAGCATAATCACTTGCCTTTTAATTAGAGGCTGGTATGAATGGACAAACGAGAGCAAAGCTGTCTCCTTTACAAACATAAAAATTTACCTTCAGGTGAAGAGGCCTGAATCAATATAAAAGACAAGAAGACCCTGTCGAGCTTTAGTCAAAATAAATCCATAATTACAACAAATATTAAAATTTAAATATGACTTTTGTTGGGGCGACAAAGGAATACACAAATCTTCCTACACAAAAAAGAAAATAATTCTTACAAATGATCCAATATATGATTAATAAAAGAAGCTACCGCAGGGATAACAGACTAATCTTCCTTAAGAGCCCAAATCTACAGGAAGGATTGGCACCTCGATGTTGGCTTAAGAAGTCTTTTAG--------------------------------------------------------------------- Iphitime_hartmanae ------------CAAAAACATAGCTTAATGACTTCACCATATTAAGTTTATCCTGCCCAGTG----AATATTTAAACGGCCGCTTT--------TGTGCTAAGGTAGCATAATAATTTGCCTTTTAATTGAAGGCTAGAATGAATGGACAAATA-AATTAATACTTTATTATAACTAACCCTAAAAATTAAATTTAACGTGAAAATTCGTTATCACTCTAAAAAGACCAAAAGACCCTG-GGAGCTTAAATCTTATAGTA------------------TTTATACTGCAAGA--GATTTTTGTTGGGGCGGCAAAGAA-----TATACATTCTTATTCTCTTATAAATTTACCTAAATTAATTCTA--AAT----------------AAGCTACCCCAGGGATAACAGGCTACTCTTTTTTAAAAGTCCACATTTACAAAAAGAAATAGCACCTCGATGTTGGCTTAAGAATATGTAAA--ATGTAGCAGTTTTACTGAA-TGGCTTGTTCCGCCAATAATTTCTTACGTGATCTGAG----------- Iphitime_paguri --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Ophryotrocha_alborana ---------------------------------------------------CCTGCCCAGTG----ATGTATTAAACGGCCGCAGT-------TTGTGCTAAGGTAGCATAATCATTTGCCCTTTAATTGGGGGCTAGAATGAATGGATTTATG-GGGAACAACTGTTTCTTTATGATTAGTAAAAATTAATAAAAGTGTGAAGAGGCACTTATAAAAAAGGGGGACCAAAAGACCCTA-AGATCTTTAATTTTGGAGAA------------------TTAATTCATAAGAA---ATTTTTGTTGGGGAAACATAAAG-----TTTTGATTACTTTAAATTTATTAAAATTATCCTTTAATATAAGTGGTAT---------------TAGTTACCTTAGGGATAACAGACCAATTTCTTTTAAAAGTTCATATTTACAAAGAAGTTTGGCACCTCGATGTTGGCTTAAGAATAGTTTAA--GTGCAGCAGCTTAAATGAA-GGGCTT------------------------------------------ Ophryotrocha_craigsmithi -----------TCAAAAACATAGCTTTGTGTAAAAAAATGCAAAGTAC-CTCCTGCCCAGTG----AAATTTTAAACGGCCGCTTT--------AGTGCTAAGGTAGCATAATCATTTGCCCTTTAATTGGGGGCTGGAATGAATGGAACCACA-TAAGTATACTTTCTTTTTTACGGACCTAAAAATTAATTTTTATGTGAAAAATCATAAATCCTATAAAAAGACCAAAAGACCCTACCGAGCTTAAATTTATAACCA------------------ACTTTGTCAAATAA---ATTTTTGTTGGGGTGATACTGGA-----TACCCATCCTAT-TTTATTAAAAACTTAACTTATAAAATTTCG--TCT----------------TAGCT{AC}CCCTAGGGATAACAGGCTACTCTTTTTTAAAAGTCCAAATTTACAAAAAGGCCCAGCACCTCGATGTTGGCTTAAGAATAAATTAA--GTGCAGCAGCTT{AC}ATCAAA-GGGCTTGT---------------------------------------- Ophryotrocha_eutrophila --GCCTGTTTTTCAAAAACATAGCCCCACGATGATGTATGTGAGGTGA-GACCTGCCCAGTG-----AGTTTTAAACGGCCGCTAA--------AGCGCTAAGGTAGCATAATGATTTGCCCCTTAATTAGGGGCTAGAATGAACGGTTAAACG-GGTTATACCTTTCTTAAACACAACACCCTAAACTAAACTGTCTGTGAAAATGCAGACATCCACCTGAAAGACCAAAAGACCCTA-GGAGCTATAATTTGGTTAAT------------------ATTTAATTGGCTTA---ATTTTTATTGGGGTAATGGTGGA-----AATTCATCCACATATGCATAAATTTAGTCAGACACTAGATTAAAC-------------------AAGCTACCCTAGGGATAACAGGCTAATCTTTTTTAAAAGTCCTAATTAACAAAAAGAACTAGCACCTCGATGTTGGCTTAAGAGTACCTGTA--GTGTAGCAGCTACAGCTAA-AGGCTTGTTCCGCCTATAATTTCTTACGTGATCTGAG----------- Ophryotrocha_geryonicola ------------CAAAAACATAGCTAATAGAATAAATAATTGTTAGTGCCCCCTGCCCAGTG----AAAT-TTAAACGGCCGCGCA--------AGTGCTAAGGTAGCATAATAATTCGCCTTTTAATTGAAGGCTAGTATAAACGGAGTTATA-GATTGTTACTTTATTTTTAATAACTTTAAAAATTAAATTTTATATGAAAATGTATAAATATAAAAAAAAGACCAAAAGACCCTT-GGAGCTTAAATCTTACCCCT------------------TTAAAGCTTTACAG---ATTTTTGTTGGGGTGACAAGAGA-----TA-ATCCTCTCTTAATTTTATTATTTACATCTTTTAAATTCTA--AAT----------------TAGCTACCCTAGGGATAACAGGCTAATCTTTTTTACGAGTCCACATTTACAAAAAGGACTAGCACCTCGATGTTGGCTTAGGAGTAAACAAT--ATGTAGCAGTATCGTTTAA-TGGCTTGTTCCGCCAATAATTTCCTACGTGATCTG------------- Ophryotrocha_globopalpata TCGCCTGTTTTTCAAAAACATAGCTTTCCGTAAAATTATGAAAAGTAACTTCCTGCCCAGTG----ATTTTTTAAACGGCCGCGGT---TTATCCGTGCAAAGGTAGCATAATCATTTGTCCTTTAATTAAGGGCTAGAATGAATGGATTTACA-AAAAATAACTTTCTTTGTTATAAAAATAAAACCTAATATATGGATGAAAAATTCCATATTTTATAAAAAGACCAAAAGACCCTAGCGAGCTTAA-----------------------------ATATTAACAAAACCATATTTTAAATTGGGGCGATTAAAGA-----TAAATTTCATCTTTTTATAATATAAATTATAATTTTACCTAAACTAAACTTAAAA---------AAGTTACCGTAGGGATAACAGGCTACTCAATTTTTAAAGTTCATATTAACAAATTGTCTTAGCACCTCGATGTTGGCTTAAGGATACTCTAAA-ATGCAACAGTTTTACAAAGCAGGCTTGTTCCGCCTTTAATTCCTTACGTGATCTGAG----------- Ophryotrocha_gracilis ---------------------------------------------------TCTGCCCAGTG---AAATAATTTAACGGCCGCATT-------AAGTGCTAAGGTAGCATAATGATTCGCCCTTTAATTGGGGGCTTGTATGAACGAACTCATA-AATTAATTCTTTATTACCCTTAAACCTATAACTTAAATTTTATGTGAAAATTCATAATTTATTTAAAAAGACCAAAAGACCCTA-GGAGCTTAAATTTTAATTTA------------------TTGTTAAATTAAAA---ATTTTGGTTGGGGAAACCTGGGA-----TA-GTCCTCCTATCTGATATTACTACAATCTTTTTTAATTTTA--AAA----------------TAGCTACCCTAGGGATAACAGGCTACTCTTTTTTAAAAGTCCAAATTTACAAAAAGACATAGCACCTCGATGTTGGCTTAGGAGTAAGTAAA--ATGCAGCAGTTTTACTTAA-TGGCTT------------------------------------------ Ophryotrocha_hartmanni ---------------------------------------------------TCTGCCCAGTG--ATATCTATTAAACGGCCGCTGT--------TGTGCTAAGGTAGCATAATAATTCGCCTTTTAATTGGAGGCTAGTATGAACGAATAATTA-GGCTAACACTTTATTTTAGGTAAACATAAAAATTAAACTTAATGTGAAAATTCATTATTTTTCCAAAAAGACCAAAAGACCCTA-GGAGCTTTAATTTTTAATTA------------------CTAATAAGACACAA--AATTTTAGTTGGGGCGACACAGGA-----AA-ACCCTCCTGTTATTTATTTTATAAAATCTTTTTTACTTCAATATA----------------CAGCTACCCTAGGGATAACAGGCTACTCTTTTTTAAAAGTCCATATTAACAAAAAGACATAGCACCTCGATGTTGGCTTAGGAGTACATAAA--ATGCAGCAGTTTTATTTAA-CGGCGTT----------------------------------------- Ophryotrocha_japonica TCGCCTGTTTTTCAAAAACATAGTTTTATGAAGGTTTATATAAAATGG-TTTCTGCCCGGTGCTTTTTATAGTAAACGGCCGTTTT--------TACGCTAAGGTAGCATAATCAGTTGTTCCTTAATTGGGGACTGGAATGAAAGGGAGAACG-TGGGTAGGCTTTTTTCCTTTAAAATCTAAAAATTAAATTTCTTATGAAAATGTGAGAATAAAATTTAAAGACCAAAAGACCCTAATGAGCTTAAATTTGGGAGGG------------------GTCTCCCTTTACAA---ATTTTTATTGGGGGGATAAAGGA-----TATACATCTTTTGTTGGAATCTAAAACTTTATAATGGAAGGTT---------------------TAGCTACCATAGGGATAACAGGCCTATTTTTTTTGAGAGTTCACATTTACAATAAATTTTGGCACCTCGATGTTGGCTTAAGATAAACCCTAG-GCGCAGAAGTTTAGGTTTT-AGGCTTGTTCCGCCTATAAATTCTTACGTGATCTGAGTCCAGACCGGA Ophryotrocha_labronica ---------------------------------------------------TCTGCCCAGTG-TTAAATCAATAAACGGCCGTTTA--------TACGCTAAGGTAGCATAATCAGTTGTTCCTTAATTGGGGACTAGAATGAAGGGAACCATA-TGGATGGGCTTTTTTCATTTAATTTCTATAAATTAAACTCCTTATGAAAATGTAAGGATTGGAGTTAAAGACCAAAAGACCCTAATGAGCTTAAATTTGGATGGG------------------GCTTCCTTTAACAA---ATTTTTATTGGGGGGGTGAGGGA-----TATACATCCTTAGTTATTTATTAAACCTTTTTAAACCAAGGTG---------------------TAGTTACCATAGGGATAACAGGCCTAAATTTTTTAAGAGTTCACATTAACAAAAAAATTTGGCACCTCGATGTTGGCTTAAGATAAAACCTAG-GTGTAGAAGTTTAGGTAGA-AGGCTT------------------------------------------ Ophryotrocha_longidentata -----------TCAAAAACATAGCTTCTTGAATATTAATAAGAAGTAACTTCCTGCCCAGTG----AATTTTTCAACGGCCGCGGA----TTTCCGTGCTAAGGTAGCATAATCACTTGTCCTCTAATTAGGGACTAGAATGAATGGATACACA-AATAATAACTTTCTTTGATTTAGAACTAAAAACTAATATATGAATGAAAAATTTCATATTTTATAAAAAGACCAAAAGACCCTATCGAGCTTAAA--TGACTTTT------------------ATTTTTTAATATTATTATTTTTAATTGGGGCGATTAAAGA-----TATATTCCATCTTTTATTAATATGAAATATAAATTTACCTTAAAAATAAAAAATA---------AAGTTACCGTAGGGATAACAGGCTACTCAATTTCAAAAGTTCATATTAACAAATTGTCTTAGCACCTCGATGTTGGCTTAAGGATACTTTAAA-ATGCAACAGTTTTAATAAGTAGGCTTGTTCCGCCTTTTATACCTTACGTGATCTGA------------ Ophryotrocha_maculata -------------------TAGCTGTAAGGACCACAAATTTACAGTGA-ATTCTGCCCAGTG--ATGAAGATTAAACGGCCGCGTT--------TGTGCTAAGGTAGCATAATAATTCGCCTTTTAATTGGAGGCTAGTATGAAGGGAAATATA-AACTAAAACTTTATTATTTATAATCCTGAAACTTATACTCAGTGTGAAAATACACTGATAAATTAAAAAGACCAAAAGACCCTA-GGAGCTTAAATTAAATAAGG------------------GTTACCTTCTACTA---ATTTTAATTGGGGCGATTCAGGA-----TA-AACCTCCTGTGAATAAAAATTTTAAACCTTTTATAACTAAACACA----------------TAGCTACCCTAGGGATAACAGGCTACTCTTTTTTAAAAGTCCAAATTAACAAAAAGACATAGCACCTCGATGTTGGCTTAGGAGTAAGTAAA--ATGTAGCAGTTTTACCCAA-CGGCTTGTTC-------------------------------------- Ophryotrocha_notoglandulata ---------------------------------------------------TCTGCCCGGTGCTTTTCATAGTAAACGGCCGTTTT--------TACGCTAAGGTAGCATAATCAGTTGTTCCTTAATTGGGGACTAGAATGAAAGGGAGAACG-TGGGTAGGCTTTTTTCCTTTAAAATCTAAAAATTAAATTTCTTATGAAAATGTGAGAATAAAATTTAAAGACCAAAAGACCCTAATGAGCTTAAATTTGGGAGGG------------------GTCTCCTTTTACAA---ATTTTTATTGGGGGGATAAAGGA-----TCTACATCTTTTGTTGGAATCTAAAACTTTATAATGGAAGGTT---------------------TAGCTACCATAGGGATAACAGGCCTATTTTTTTTGAGAGTTCACATTTACAATAAATTTTGGCACCTCGATGTTGGCTTAAGATAAATCCTAGAGCGCAGAAGTTTAG------AG{GT}TTTAG{AG}GCGCT---------------------------------- Ophryotrocha_permanni ---------------------------------------------------TCTGCCCGGTG-TTAGAATTATAAACGGCCGTTTG--------TACGCTAAGGTAGCATAATCAGTTGTTCCTTAATTGGGGACTAGAATGAAGGGGATCATA-TAGATGGGCTTTTTTCGTTTGAGCTGTAAAAATTAAACTCCTTATGAAAATGTGAGGATTTTATTTAAAGACCAAAAGACCCTAATGAGCTTAAATTTAGGAGAA------------------TCTTTTTATAATAA---ATTTTTATTGGGGGGGTAAGGGA-----TATACATCCTTATTT-TTAATTAAACCTTTAAAAACTAAAGTG---------------------AAGTTACCATAGGGATAACAGGCCTAAATTTTTTAAGAGTTCACATTAACAAAAAAATTTGGCACCTCGATGTTGGCTTAAGATAAAACCTAG-GTGTAGAAGTTTAGGTAAA-AGGCTT------------------------------------------ Ophryotrocha_puerilis_puerilis ----------TTCAAAAACATAGCCCCATGACAAAGAATGTGAGGTGA-GACCTGCCCAGTG-----AATTTTAAACGGCCGCTAA--------AGCGCTAAGGTAGCATAATGATTTGCCCCTTAATTAGGGGCTAGAATGAAAGGTTAAACG-GGTTAAAGCTTTTTTAAACACAACACTTAAAACTAAACTATTTGTGAAAATGCAAATATGATAATGAAAGACCAAAAGACCCTA-GGAGCTATAGTCTTCTAGAT------------------GACCAATCAAGCAG---ACTTTTATTGGGGTAATGTTGGA-----TATTCATCCAAATATATATTAAGTATATCAGATTCTAATCTATTT-------------------AAGCTACCCTAGGGATAACAGGCTAATCTTTTTTAAAAGTCCTAATTAACAAAAAGAACTAGCACCTCGATGTTGGCTTAAGAGTACCTGTA--GTGCAACAACTACAGCGAA-GGGCTTGTTCCGCCCGTAACTTCTTACGTGATCTGAG----------- Ophryotrocha_puerilis_siberti ----------TTCAAAAACATAGCCCCATGACAAAGAATGTGAGGTGA-TACCTGCCCAGTG-----AATTTTAAACGGCCGCTAA--------AGCGCTAAGGTAGCATAATGATTTGCCCCTTAATTAGGGGCTAGAATGAAAGGTTAAACG-GGTTAAAGCTTTCTTGAACACAACACTTTAAACTAAACTATTTGTGAAAATGCAAATATTATAATGAAAGACCAAAAGACCCTA-GGAGCTATAGTCTACTTTAT------------------ACTTAGTAAAGGAG---ACTTTTATTGGGGTAATGTTGGA-----TATTCATCCAAACAGACTTATAATATATCAGAATCTAATCTATTT-------------------AAGCTACCCTAGGGATAACAGGCTAATCTTTTTTAAAAGTCCTAATTAACAAAAAGAACTAGCACCTCGATGTTGGCTTAAGAGTAACTGTA--GTGCAGCAACTACAGCGAA-GGGCTTGTTCCGCCCATAACTTCTTACGTGATCTGAGT---------- Ophryotrocha_robusta ---------------------------------------------------TCTGCCCGGTG----AGAAATTAAACGGCCGCTTT--------TGTGCTAAGGTAGCATAATCATTTGTCCTTTAATTGGGGACTAGAATGAATGGGAAAATG-TAGGTGAGCTTTTTTCTTTTAAGTTATAAAAATTAAACTTTCTATGAAAATGTAGAAATAAACTTTAAAGACCAAAAGACCCTGACGAGCTTAAATCTGGGGGAG------------------TTATCTTTTAACAG---ATTTTAATTGGGGTGATTTTAGA-----TATACATCTATTATTAAATAAAAAAACTAAATTAATGTTAGTA---------------------AAGTTACCGCAGGGATAACAGGCTAATCTTTTTTAAGAGTTCAAATCTACAAAAAGACTTGGCACCTCGATGTTGGCTTAAGAGAAATTTTAG-ATGTAGCAGTTTA{AT}ATAAA-AGGCGT------------------------------------------ Ophryotrocha_rubra ----------TTCAAAAACATAGCTTTAGGGGAGGGAATCTAAGGTGG-TTTCTGCCCGGTG----CGAAAGTAAACGGCCGCTAG--------TGCGCTAAGGTAGCATAATAAGTTGTTCTTTAATTGGGGACTGGTATAAATGGGGGTTTA-TGGGTAAGCTTTTTTGTCTTCAACTATAAAAATTAAACTCTTTATGAAAATGTAAGGATTTTATTTAGGGACCAAAAGACCCTAGCGAGCTTTAATCCTGGAGGA------------------TTATTTTTTAAGGG---ATTTTTATTGGGAGGGTATTGGG-----TACACACCCAAATTTTAATATTAATTCTATAATGTAGAAAAAG--GTG----------------AAGCTACCGTAGGGATAACAGGCTACCACTTTTTAAGAGTCCGTATCTAAAAAAGTGCTTAGCACCTCGATGTTGGCTTAAGGGACTACTAGG-GTGTATCAGTTCTAGTAAG-AGGCTTGTTCCGCCTTGTTAACCTTACGTGATCTGAGTTCAAACCGGA Ophryotrocha_scutellus ----------------------------------AAGATGAGAGGTGA-TTCCTGCCCAGTG-----AAATTTCAACGGCCGCTTA--------TGTGCTAAGGTAGCATAATAACTTGCCTTTTAATTGAAGGCTTGCATGAATGGAGTTTTA-GATTGAGGCTTTATTCACACCACCCATAAAACCTAAGATTTATGTGCAAACTCATAAATAAAAATAAAAGACCAAAAGACCCCGGGAACTTTAATTTTTCTATTT------------------ATTGATAAATACAA--AATTTACACTGGGAGAGTGCGGGA-----TATACATCCCCAATAATACAAAATTCA---CCTTTTAAATCAATACTA----------------AAGCTACCCCGGGGATAACAGGCTACTCTTTTTTCAAAGCCCAAATTTACAAAAAGATTTAGCACCTCGATGTTGGCTTAAGAGTAAGTAAA--ATGTAGCAGTTTTACTTAA-TGGCTTGTTCCGCCAATAATTTCTTACGTGATCTGAGT---------- Palpiphitime_lipovskyae --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Palpiphitime_lobifera -------------------------------------ATATAAAGTAA-CTCCTGCCCAGTG----AAATTTTAAACGGCCGCTTT--------AGTGCTAAGGTAGCATAATCACTTGCCCTTTAATTGGGGGCTGGAATGAATGGAATCACA-TAAATATACTTTCTTTTTTACGCTTATAAAAATTATTCTTTATGTGAAAAAACATAAATAAATTAAAAAGACCAAAAGACCCTACCGAGCTTGAATTTATAACCA------------------TCTTTGTCAATTAA---ATTTTTATTGGGGTGATACTGGA-----TACCCATCCTCTCTCTATTTTAATCTTAACTTATTAAATTTCG--TTT----------------TAGCTACCCTAGGGATAACAGGCTACTCTTTTTTAAAAGTCCAAATTTACAAAAAGACCCAGCACCTCGATGTTGGCTTAAGAATATATTAA--GTGCAGCAGCTTAATAAAA-GGGCTTGT---------------------------------------- Parougia_eliasoni --------------------------------------------------------CCCGTG-AATTC---TTCAACGGCCGCGAT----TAAACGTGCAAAGGTAGCATAATCAATCGTCCTTTAATTGTGGACCAGAATGAATGGATAAATAAAAATTAAACTATGTAATGTTTACAAATAAAACTTTACCTTTAGATGAAAAGGTCTAAATTTAAATAAAAGACCAGAAGACCCTATAGAGCTTTTTCTTAAATCAAC-----------------TCTACAGTTGAAAATAAGATTTGGTTGGGGCAACCTGGGA-----ATTACCTTCCTTTACTACAATGAATTATATTTTACTCCTTAAATAAATTTATATA---------AAGCTACCTTAGGGATAACAGGCTAATCCTATTTTATAGTCCACATACACAATAGGGTTTGGCACCTCGATGTTGGCTTGAGATCACTTTAAA-ATGAAGACGTTTTAAATAGTAGGCTTGTTCAGCCTTAAAAATCTCACGTGATCTGAGTCCAGACCGGA Protodorvillea_kefersteini ----------------------------------------------------------------------------------------------------------GCATAATCATTTGCCCTTTAATTGGGGGCTGGAATGAATGGATTTACGTGACTAAAACTTTTCCCTA-ACAACCCTAAAAATTATCCTTTAGATGAAGAGATCTAAATTATAATGGAGGACAAAAAGACCCCGTCGAGCTTTACACAAAATTTA------------------TATCATTATTCAACATGTGTTTGGTTGGGGCGACCAAGGAATAAACAAATCTTCCTCTACATAAAAGGACCCTTATCCACCTTATAGACCCTATCCTGATCTAAAGAT-AAGCTACCGCAGGGATAACAGGCTAATCCCCTTTAAGAGTCCACATCGACAAGGGGGT-------------------------------------------------------------------------------------------------------- ; END; BEGIN CODONS; CODONPOSSET CodonPositions (CHARACTERS = 16S_rDNA) = N: 1-549; CODONPOSSET * CodonPositions (CHARACTERS = 16S_rDNA) = N: 1-549; END; [ The following blocks are output data for analysis step 5288 ] BEGIN TREES; TITLE Tb10696; LINK TAXA = TaxaForAnalysisStep5288; TREE Fig._5 = [&R] (Eunice_pennata,(((Dorvillea_erucaeformis,Dorvillea_rubrovittata),Dorvillea_similis),Protodorvillea_kefersteini),((Dorvillea_albomaculata,Parougia_eliasoni),((((Ophryotrocha_scutellus,(Ophryotrocha_gracilis,(Ophryotrocha_hartmanni,Ophryotrocha_maculata))),((Iphitime_hartmanae,Iphitime_paguri),Ophryotrocha_geryonicola)),((Ophryotrocha_craigsmithi,Palpiphitime_lobifera),Palpiphitime_lipovskyae),(Ophryotrocha_eutrophila,(Ophryotrocha_puerilis_puerilis,Ophryotrocha_puerilis_siberti)),Ophryotrocha_alborana,((((Ophryotrocha_japonica,Ophryotrocha_notoglandulata),(Ophryotrocha_labronica,Ophryotrocha_permanni)),Ophryotrocha_rubra),Ophryotrocha_robusta)),(Ophryotrocha_globopalpata,Ophryotrocha_longidentata)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr6015] END;