#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 10, 2024; 12:22 GMT

TreeBASE (cc) 1994-2008

Study reference:
Bremer K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic
reconstruction. Evolution, 42: 795-803.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S115]

[ The following blocks are input data for analysis step 55 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep55;
        DIMENSIONS NTAX=9;
        TAXLABELS
            Apiaceae
            Asteraceae
            Brassicaceae
            Caprifoliaceae
            Chenopodiaceae
            Fabaceae
            Poaceae
            Polygonaceae
            Solanaceae
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2035]

	TITLE Figure_1;
	LINK TAXA = TaxaForAnalysisStep55;
	DIMENSIONS NCHAR=64;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                          10        20        30        40        50        60    ]
[                           .         .         .         .         .         .    ]
Apiaceae           AATAAATGTCCAACAACAGCGGTGGGCGGATCTAGTCGGACAGCGAAGTGTGAACTCGTTTCTG
Asteraceae         ATTGGTTGACCTGAAACAGCGATAAATGAAGGAAGACGGGTGGCGCCAAGCAAAATAATTAGTT
Brassicaceae       CATGGAAGTGAAGATTGAGGGATAAATGGGTCTAAGAGAGTGGAATCAAGCATAGAAAATTGAG
Caprifoliaceae     ATTGGTTGTCCTGCCTCAGCGTTGGATGGATCTGGAACTACGGCACCAAGCATTAAAAATTATT
Chenopodiaceae     CGTGGATATCCTACAAGTCTTAAGGGTGGGTCTGGCCGTGTGTCAAAGTGTCTAATCGTATGTT
Fabaceae           CATGGAAGTGAAGAATCAGTGAGGGGTCGATCTAATATCACAGAATCAATCATTATAAATTGAT
Poaceae            CGAGGATTTCCTACAAGCCTTAGAACACAAGTAAAGAAGACGTCACCAAGCATAGAAATTTGAG
Polygonaceae       CGAGGAAGTCCTGAAAGACTTATGGCTGGATCTGGCATGGTATCAATAATCAAAACGGTAA?TT
Solanaceae         CATAAATGAGATGAAACACTAATGGATGGATCTGGAATTACGGAACCAAGCATTAAAATTTGAG
;
END;

[ The following blocks are output data for analysis step 55 ]
BEGIN TREES;
      TITLE Tb4834;
      LINK TAXA = TaxaForAnalysisStep55;
      TREE Fig._5B = [&R] ((Apiaceae,((Brassicaceae,Fabaceae),Solanaceae),Caprifoliaceae,(Chenopodiaceae,Polygonaceae),Asteraceae),Poaceae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1537]


END;
BEGIN TREES;
      TITLE Tb4834;
      LINK TAXA = TaxaForAnalysisStep55;
      TREE Fig._3 = [&R] (Poaceae,(((Apiaceae,Asteraceae),(((Brassicaceae,Fabaceae),Solanaceae),Caprifoliaceae)),(Chenopodiaceae,Polygonaceae)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1534]


END;
BEGIN TREES;
      TITLE Tb4834;
      LINK TAXA = TaxaForAnalysisStep55;
      TREE Fig._5C = [&R] ((Apiaceae,((Brassicaceae,Fabaceae),Solanaceae),Caprifoliaceae,Chenopodiaceae,Asteraceae,Polygonaceae),Poaceae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1538]


END;
BEGIN TREES;
      TITLE Tb4834;
      LINK TAXA = TaxaForAnalysisStep55;
      TREE Fig._4 = [&R] (Poaceae,((((Apiaceae,Asteraceae),Caprifoliaceae),((Brassicaceae,Fabaceae),Solanaceae)),(Chenopodiaceae,Polygonaceae)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1535]


END;
BEGIN TREES;
      TITLE Tb4834;
      LINK TAXA = TaxaForAnalysisStep55;
      TREE Fig._5D = [&R] ((Apiaceae,Brassicaceae,Caprifoliaceae,Solanaceae,Chenopodiaceae,Fabaceae,Asteraceae,Polygonaceae),Poaceae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1539]


END;
BEGIN TREES;
      TITLE Tb4834;
      LINK TAXA = TaxaForAnalysisStep55;
      TREE Fig._5A = [&R] ((((Apiaceae,Asteraceae),((Brassicaceae,Fabaceae),Solanaceae),Caprifoliaceae),(Chenopodiaceae,Polygonaceae)),Poaceae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1536]


END;