#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 10, 2026; 9:06 GMT TreeBASE (cc) 1994-2008 Study reference: Smith S., Miller R., Otto S., Fitzjohn R., & Rausher M. 2010. The effects of flower color transitions on diversification rates in the morning glories (Ipomoea subg. Quamoclit, Convolvulaceae). In M. Long (ed.) Darwin-China 2009. Peking University Press, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10237] [ The following blocks are input data for analysis step 5555 ] BEGIN TAXA; TITLE TaxaForAnalysisStep5555; DIMENSIONS NTAX=46; TAXLABELS Ipomoea_alba Ipomoea_ampullacea Ipomoea_ancisa Ipomoea_aristolochifolia Ipomoea_barbatisepala Ipomoea_cairica Ipomoea_cardiophylla Ipomoea_chamelana Ipomoea_chenopodifolia Ipomoea_cholulensis Ipomoea_coccinea Ipomoea_costellata Ipomoea_dumetorum Ipomoea_dumosa Ipomoea_expansa Ipomoea_funis Ipomoea_hastigera Ipomoea_hederifolia Ipomoea_indica Ipomoea_lindheimerii Ipomoea_lobata Ipomoea_mairetii Ipomoea_marginata Ipomoea_meyeri Ipomoea_microsepala Ipomoea_minutafolia Ipomoea_muricata Ipomoea_neei Ipomoea_neurocephala Ipomoea_nil Ipomoea_orizabensis Ipomoea_parasitica Ipomoea_praematura Ipomoea_pubescens Ipomoea_purga Ipomoea_purpurea Ipomoea_quamoclit Ipomoea_santillanii Ipomoea_seducta Ipomoea_sesscosiana Ipomoea_stans Ipomoea_ternifolia Ipomoea_tricolor Ipomoea_tuboides Ipomoea_uhdeana Ipomoea_variabilis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4732] TITLE Ipomoea_ITS; LINK TAXA = TaxaForAnalysisStep5555; DIMENSIONS NCHAR=689; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Ipomoea_alba TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTT-ATCGTCC----GGGGA--------------------------------C-TTGTCTCTCGGGC----GATCAACCAACCCC-GGCGCGGAACGCGCCAAGGAATACATTATCGAGATGGTCGGCCTGCCCTTGCCCCGTTAATGCGGATCGCTAGGG--GG---CGTCGGCGTCTTACTTTAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTTGGCCCTTAGGT--CGAG-----TTT---GGGG-AGCGGATGGTGGCCTCCCGTG--------CA-CT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCACGGCGGCGGAC--GTCACGGCGAGTGTTGG---TCGTACCC-A--GCGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGA-CGAA-AGACCCTTGTGCCA-TTCAT--------GCAAGTTTGGCTCTCCGACCGC Ipomoea_ampullacea TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTC-GTCGTCC----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGACGGCCAGCC-GCCCTTGCACCGTCATCGCGGATTGCTCGGG--GG---CGTCGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTCGGCCCCTCGGC--CGAG-----TTT---GGGG-AGCGGATGGTGGCCTCCCGTG--------CAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCA-A--GCGTGC-ATATCTCC-----GCGCCGTGCCCCCGTCGTCATAGGG-CGAA-AGACCCTT----GA-GCCGC--------GTCAGTGCGGCTCTCCGACCGC Ipomoea_ancisa TCGAACCCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTT-ATCGTCC----GGAGA--------------------------------C-CTG--TCTCGGGC----GACCAACTAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCAGCCTGCCCTTGCCCCGTTACTGCGGATCGATAGGG-AGG---CGTCGGCGTCTTACT-TAATAAA------TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTTGGCCCCTTGGT--CGAG-----TTT---GGGG-AGCGGATGATGGCCTCCCGTGCCCC----CAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGGCCCCGTCGTCCGCGAG-CGAA-AGACCCTT-AACGA-GTCAC--------GTCAGTGT-------------- Ipomoea_aristolochifolia TCGAAACCTGC-A-TAGCAGAACGACTAGAGAACGTGTTTGTTTATC---CAA---ATTTC-TCGTTC----GGGGTGCGTCCCATCCTCCTATT-GGAGGGGAG-GG-C-TCG--TCTCGGGC----GATTAACGAACCCCCGGCGCGGAACGCGCCAAGGAATATCGTATTGAGATGGCCAGC-TTCCCTTGCCCCGTTATTGCGGATTGCTCGGG-AGG---CAGCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCATCC-T-TGTTTGGCCCCTTTGGT-CGAG------TGC--GGGG-AGCGGATGATGGCCTCCCGTGCAC-----CAACT-CG-GGGCGCGGCTGGTTAAAA-CGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCA-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCTGCCGTTTGTGGG-CGAAATGACCCT--AATGA-GCCATGTTA----GTTAGTGTGGCTCTCCGACCGC Ipomoea_barbatisepala TCGAAACCTGC-A-CAGCAGAACGACCGGAGAACACGTTTGTT-ATACCGCACTACTCTC-GTCGTCC----GGAGA--------------------------------CCTCGTCTCTCGGGC----GATCAACAAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCGGCCCGCCCTCGCCCCGTCACTGCGGATCGCGAGGG-AGG---CGTCGGCGTCTTACC-GAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCCTTT-----------CGAG-----CGCAC-GGGG-AGCGGATGATGGCCTCCCGTGCCCC----CAACT-CG-GGGCGCGGCCGGCCCAAA-TGCGAG----TCCCC-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCCCA--GCGTGC-ATATCTCC-----GCGCCGTGCCCCCGTCGTCCGCGGG-CGAG-AGACCCCC-AACGA-GTCGC--------GTCACCGCGGCTCTCCGACCGG Ipomoea_cairica TCGAAACCTGC-A-CAGCAGAATGACCAGAGAACACGTTTGTT-ATT---CAC---TATTC-TCGACT----GTGACGCGTCCT-TCCTCC-----CGAGGGG---GG-C-GTG--TCTCGGGC----GATTAACGAACCCCCGGCGCGGAACGCGCCAAGGAATACCTTATTGAGATGGCCGGCC-GCCCGTGCCCCGTTACCGCGGATCGCTCGGG--GG---CGTTGGCGTCTTACT-TAATCAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCAA-TGCTTGGCCCCT--GGT-CGAG------CGC--GGGG-AGCGGACGATGGCCTCCCGTG-----------CT-CT-GGGCGCGGCTGGCCCAAA-TGCGAG----TCCTT-GGCGACGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-AGCGTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTTCGCGGA-CGAA-TGACCCAA----GA-GCCCC--------GTCAGCGCGGCTCTACGACCGC Ipomoea_cardiophylla TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTC-ACAATCTAC---TCCC-GTCGTCC----GGAGA--------------------------------CATCGTCTCCCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGACGGCCAGCCTGCCCGCGCCCCGTTATCGCGGATCGTCAGG---GG---CGTCGGCGTCTTACT-CAAAAAAAAAAAATACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC---GCTTT------------CGAG-----CGC---GGGG-AGCGGATGATGGCCTCCCGTG--------CAACT-GG-GGGCGCGGCCGGCCCAAA-TGCGAG----TCCCC-GGCGGCGGAC--GTCGCGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGG-CAAG-AGACCCTT----GA-GTCAC--------GTCAACGTGGCCCTCCGACCGC Ipomoea_chamelana TCGAAACCTGC-G-CAGCAGAACGACCAGAGAACGTGTTTGTT-ATT---CAC---TCTTT-TCGTCC----GGG----------------------------------C-TAG--TCTCGGAC----GATGAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATTGAGATGGCCAGC-TACCCTTGCCCCGTTATTGCGGATCGCTAGGG-TGG---CGTCGGCGTCTTACT-TAATAGAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCC-TGCATGGCCATTCGGT--CGGG-----TAAG--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----CAATC-TGAGGGCGCGGTTGGCTCAAA-TGCGAG----TCCCT-GGCGTCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGC-ATATCTTC-----GCGTCGTGCCCC-GTCGT-CGGCGG-CGAT-TGACCCTAACGGTA-GCCAT--------GTCTGTGTGGCTCTCCGACCGC Ipomoea_chenopodifolia TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-AT----CAC---TCTCA-TCGTCGTCCCGAGA---------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCAGC-CGACCTTGCCCCGTTACATCGGGTCGCTCGGG-AGG---CGTCAGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCC--CTGC---------------CAGT---CTTCGG--GGGG-AGCGGATGATGGCCTCCCGTGCAC-----CTACT-CG-GTGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAA--GTCACGGCGAGTGGTGG---TAGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTTCGCGGG-CTAA-AGACCCTT-GACGA-GCCGC--------GTCAGCGTGGCTCTCCGACCGC Ipomoea_cholulensis TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTTTGTT-ATT---CAC---TCCTT-TCGTCC----GCG----------------------------------C-TAG--TCTCGGGCGATCGATTAACCAACCCCCGGCGCGGAATGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATTGCGGATCGCAAGGG-CGG---CGTCGGCGTCTTACC-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCT-TGCTTGGCCTACGGCC--CG-G-----TACG--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----GATTTGCG-CGGCGTGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGCAATATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTAACTGGATGCCGC--------GCTAGCGTGGCTCTCCGACCGC Ipomoea_coccinea TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTTTGTT-ATT---CAC---TCTTT-TCGTCC----GGG----------------------------------C-TAG--TCTCGGGCGATCAATTAACCAACCCCCGGCGCGGAATGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATTGCGGATCGCAAGGG--GG---CGTTGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCT-TGCTTGGCCCTTTGGC--CGAG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTG--------CAATTGCG-TGGTGCGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAT--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGCAATATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTA----GA-GCCAT--------GTCATAGTGGCTCTCCGACCGC Ipomoea_costellata TCGAAACCTGC-C-TAGCAGAACGACCAGAGAACGTGTTTGTT-ATT---AAC---TCTTT-TCGTCC----GGG----------------------------------T-TAT--TCTCGGGC----GAACAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACTGTATTGAGATGGCCAGC-TGTCCTTGCACCGTTATTGCGGATTGCCGGGG-AAG---CGTCGGCGTCTTACC-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCAACCCC-TGCTTGGCTATTTGGC--CGAG-----TGAG--GGGG-AGCGGACGGTGGCCTCCCGTGCCA-----CAATT-GGATGGCGCGGCTGGCTCAAA-TTCAAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGC-ATATCTTC-----GCGTCGTGCGCCCGTCGTTCTGTGG-CGAA-TGACCCTAAGTAGATGCCAC--------GTTAGCGCGGCTCTCCGACCGC Ipomoea_dumetorum TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTTTGTT-ATC---CAC---CCTTC-TCGTTCC---GTGGTGTGTCCC-TCCTCC-----TAGGCGGAG-GG-C-TCG--CCTCGGGC----GATCAACTAACCCCCGGCGCGGAATGCGCCAAGGAATACCGTATTGAGATGGCCAGC-TGCCCTTGCACCGTTATTGCGGATCGCTCGGG--GG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCAAGGCCCCTT-GGT-CGAG------CGT--GGGG-AGCGGATGTTGGCTTCCCGTG--------CAAAT-TG-CCGCGCGGTTGGCCCAAA-TGCGAG----CCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TGGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTTCGTGGG-CAA-GTGACCCTA----GA-GCCAT--------GTCATTATGGCTCTCCGACCGC Ipomoea_dumosa TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTTGTT-ATC---AAA---A--TC-T-GTCGACC-GGGGCGGGTCCCTTCCTCCTCTC-GGAGGGGGGCGG-C-TCG--CTTCGGGC----GATCAACGAACCCCCGGCGCGGAAAGCGCCAAGGAATACCACATCGAGACGGCCCGC-TACCCTTGCACCGTTCTTGCGGACTGCTCGGG-AGGCAACGGCCAAGTCTTACC-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCGACC--CCGCTTGGCCTCTC-GGT-CGAG------CGC--GGGG-AGCGGATGGTGGCCTCCCGTGCCCCCTCACAAGT-CG-GGGCGCGGCCGGCTAAAA-TGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC--TTCGCGTCGTGCCCCCGCCGTTCGTGGC-CCAAACGACCCC--AGCGA-GCCGC--------CTAAGCGCGGCTCTCCGACCGC Ipomoea_expansa TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTTTGTTTATC---CAC---ATGTC-TCGTTC----GGGGTGCGTCCCTTCCTCCTACC-GGAGGGGG--GGCC-TCG--TCTCGGGC----GATCAACGAACCCCCGGCGCGGAATGCGCCAAGGAATACCGTATTGAGATGGCCAGC-TTCCCTTGCCCCGTTTT-GCGGATCGCTCGGG--GG---CAGCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATTAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCGACC--CTGCTTGGCC-CTTTGGT-CGAG------TGC--GGGG-AGCGGATGATGGCCTCCC--------------------GTGCGCGGCTGGCTAAAA-CGCGAG----TCCTT-GGCGGTGGAC--GTCACGGCGAGTGGTGG---TCGTACCA-A--GTGTGC-ATATCTTC-----GCGCTGTGCCCCTGCCGTTCGTGGG-CGAAATGACCCTA----GA-GCCAT--------GTCAGTGTGGCTCTCCGACCGC Ipomoea_funis TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTTGTT-ATTTTTCAC---TCTTT-TCGTCC----GGG----------------------------------C-TAG--TCTCGGGCGATAGATTAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATTGCGGATCGCAAGGG--GG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCT-TGCTTGGCCCTCTGGC--CGGG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTG--------CAACTGCG-CGGCGCGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GCGTGCATTATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTT----GA-GCCGC--------GTGAGTGTGGCTCTCCGACCGC Ipomoea_hastigera TCGAAACCTGC-G-AAGCAGAACGACCAGAGAACGCGTTTGTT-ATTTTTCAC---TCTCT-TCGGCC----GGG----------------------------------C-TAG--TCTCGGGCGATAGATTAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATCGCGGATCGCAAGGG--GG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCGTGGGCGTCACGCATCGCGTCGCCCCCCC-TGCTTGGCCCTCTGGC--CGAG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTG--------CAACTGCG-CGGCGCGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GCGTGCATTATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTA----GA-GCCGC--------GTCAGTGTGGCTCTCCGACCGC Ipomoea_hederifolia TCGAAACCTGC-A-CAGCAGAACGACCGGAGAACGCGTATGTT-ATCTTTCAC---TCTTT-TCGTCC----GGG----------------------------------C-TAG--TCCCGGGCGATAGATTAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATTGCGGATCGCAAGGG-CGG---CGTCGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCC-TGCTCGGCCCTCTGGC--CGAG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----CAACTGCG-CGGCGCGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GCGTGCATTATCTTC-----GCGTCGTGCCCCCGTCGTCTCGGTGGCGAA-TGACCCTATCTGGA-GCCTC--------GTCGGTGTGGCTCTCCGACCGC Ipomoea_indica TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TATC-GTCGTCC----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGACGGCCGGCC-GCCCTTGCACCGTTATCGCGGATCGCTCGGG-CGG---CGTCGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCCCGGCCCCTCGGC--CGAG-----CTT---GGGG-AGCGGATGGTGGCCTCCCGTGCCCCC---TAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GCGTGC-ATATCTCC-----GCGCCGTGCCCCCGTCGTCCGCGGG-CGAA-AGACCCTTCGACGA-GCCGC--------GTCAGTGCGGCTCTCCGACCGC Ipomoea_lindheimerii TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATC---CAC---TATC-GTCGTCC----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAAAGTGCCAAGGAATACCGCATCGAGACGGCCTGCC-GCCCTTGCACCGTTATCGCGGATCGCTCGGGGA-----CGTTGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTCGGA----------CGAG-----CTT---GGGG-AGCGGATGGTGGCCTCCCGTG--------CAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCAT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GCGTGC-ATATCTCC-----GCGTCGTGCCCCCGTCGTCCGCGGG-CAAA-AGACCCTT----GA-GCCGT--------GTCAGTGCGGCTCTCCGACCGC Ipomoea_lobata TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTTGTT-ATT---CAC---TCTTT-TCGTCC----GGG----------------------------------C-TAG--TCTCGGGCGATCGATTAACCAACCCCCGGCGCGGAATGCGCCAAGGAATACCCTATTGAGATTGCCAGC-TACCCTTGCCCCGTTACTGCGGATCGCGAGGG--GG---CGTTGGCTTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCT-TGCTTGGCCCTCGGC---CGAG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTG--------CAATTGCG-CGGCGCGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGCAATATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTA----GA-GCCGC--------GTAAGCGTTGCTCTCCGACCGC Ipomoea_mairetii TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTC-GTCGTCC----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGACGGCCAGTC-GCCCTTGCACCGTTATCGCGGATCGCTCGGG--GG---CGTCGGTGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTATCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTCGGCCCCTCGGC--CGAG-----TTT---GGGG-AGCGGATGGTGGCCTCCCGTG--------CAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCA-A--GCGTGC-ATATCTCC-----GCGCCGTGCCCCCGTCGTCATAGGG-CGAA-AGACCCTT----GA-GCCGC--------GTCAGTGTGGCTCTCCGACCGC Ipomoea_marginata TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTC-ACAATCTAC---TCTC-GCCGTCC----GGAGA--------------------------------CATCGTCTCCCCGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGACGGCCAGCCTGCCCGCGCCCCGTTATCGCGGACCGTCAGG---GG---CGTCGGCGTCTTACT-CAAAAAAAAAA--TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC---GCTTT------------CGAG-----CGC---GGGG-AGCGGATGATGGCCTCCCGTG--------CAACT-GG-GGGCGCGGCCGGCCCAAA-TGCGAG----TCCCC-GGCGGCGGAC--GTCGCGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGG-CAAG-AGACCCTT----GA-GTCAC--------GTCACCGTGGCCCTCCGACCGC Ipomoea_meyeri TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTTTGTTTATC---CAC---ATTTC-ACGTTC----GGGGTGCGTCCCTTCCTCCTGCC-GGAGGGGAG-GG-C-CAG--CCTCGGGC----GATCAACGAACCCCCGGCGCGGAACGCGCCAAGGAATACTTTATCGAGATGGCCAGC-TTCCCTTGCCCCGTTATTGCGGATCGCTAGGG-AGG---CAGCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCACCCCTCTGCTTGGCCTATTTGGT-CGAG------CGC--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----CTTGT-CG-GGGCGTGGCCGGCTAAAA-CGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCA-A--GTGTGC-ATATCTTC-----GCGCCGTGTCCCTGTCGCTCGTGGG-CGAAATGACCCT--AATGA-GCCAT--------GTCGGTGTGGCTCTCCGACCGC Ipomoea_microsepala TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTCGTT-ATT---CAC---TATT--T-CTCGTCC-GGGGCGCTGCCCTCC---------GGGG---------C-ACG--TCTCGGGC----GATCAACAAACCCCCGGCGCGGAACGCGCCAAGGAATACCTCATCGAGATGGCCAGC-ACCCCTTGCCCCGCTACCGCGGATCGCTCGGG-ACG---CGTCGGCGTCTTACA-CAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC-CTGCTCTG------------------CTTCCGG-GGGG-AGCGGATGATGGCCTCCCGTGCCCCT---TACGA-CG-TGGCGCGGCCGGCTAAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TAGTACCT-A--GCGTGC-GTATCTTC-----GCGCCGTGCCCCCGTCGTTCGGAGG-AGAA-TGACCCCT-AACGA-GCCGCGCACGCAAGTGCTCGCGGCTCTCCGACCGC Ipomoea_minutafolia TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTCGTT-TTT---CAC---TATT--T-CCCGTCC-GGGGCGCGGCCCTCC---------GGGG---------C-ACG--TCTCGGGC----GATCAACAAAAACCCGGCGCGGAACGCGCCAAGGAATACCTCATCGGGATGGCCGGC-TCCCATTGCCCCGCTACCGCGGATCGCACGGG-ACG---CGTCGGCATCTTACT-CAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCTCCCGGCTCTG------------------CTTCGGG-GGGG-AGCGGATGATGGCCTCCCGTGCCCCG---TAAGA-CG-TGGCGCGGCCGGCTTAAA-TGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TAGTACCT-A--GCGTGC-ATATCTTCTCTTCGCGCCGTGCCCCCGTCGTTCTGCGG-GAAA-TGACCCT--AACGA-GCCGCGCACGTAAGTGCCCGCGGCTCTCCGACCGC Ipomoea_muricata TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTT-ATCGTCC----GGGGA--------------------------------C-TTGTCTCTCGGGC----GATCAACTAACCCCCGGCGCGGAACGCGCCAAGGAATACCTTATCGAGATGGCCGGCCTGCCCTTGCCCCGTTAATGCGGATCGCTAGGG--GG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTTGGCCCTTGGGT--CGAG-----TTT---GGGG-AGCGGATGGTGGCCTCCCGTG--------CA-AT-CG-GGGCGCGGTTGGCTCAAA-TGCGAG----TCCCATGGCGGCGGAC--GTCACGGCGAGTGTTGG---TCGTACCC-A--GCGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGA-CGAA-AGACCCTTGAGCCA-TCCAT--------GCAAGTTTGGCTCTCCGACCGC Ipomoea_neei TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTTGTT-ATTTTTCAC---TCTTT-TCGTCC----GGG----------------------------------C-TAG--TCTCGGGCGATCGATTAACCAACCCCCGGCGCGGAATGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATTGCGGATCGCAAGGG-CGG---CGCCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCTCC-TGCTCGGCCCTCTGGC--CGAG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----TAACTTCG-CGGCGCGGATGGCCCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GCGTGCGTTATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTAACTGGA-GCCGC--------GCCCGCGTGGCTCTCCGACCGC Ipomoea_neurocephala TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTC-ATT---CAC---TCCC-GTCGTCC----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGACGGCCGGCC-GCCCTCGCACCGTTATCGCGGATCGCTCGGG--GG---CGTCGGCGTCTTACA-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TTCTCGGT----------CGAG-----TTG---GGGG-AGTGGATGGTGGCCTCCCGTG--------CGAAT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGACGGACACGTCACGGCGAGTGGTGG---TCGTACCC-A--GCGTGC-ATATCTCC-----TCGCCGTGCCCCCGTCGTCCGCGGG-CGAA-AGACCCTT----GA-GCCGC--------GTCAGTGCGGCTCTCCGACCGC Ipomoea_nil TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TTTC-GTCGTCT----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACAAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGATGGCCGGCC-GCCCTTGCACCGTTATCGCGGATCGCTCGGG-CGG---CGTCGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCT--TGCCTGGCCCCTCGGC--CGAG-----CTT---GGGG-AGCGGATGGTGGCCTCCCGTGCCCCT---TAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----CCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GCGTGC-ATATCTCC-----GCGCCGTGCCCCCGTCGTCCGCGGG-CGAA-AGACCCTTCGACGA-GCCGC--------GTCAGTGCGGCTCTCCGACCGC Ipomoea_orizabensis TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-AT----CAC---TCTCA-TCGTCGTCCCGAGA---------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCAGC-CGACCTTGCCCCGTTACATCGGGTCGCTCGGG--GG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCC--CTGC---------------CAGT---CTTCGG--GGGG-AGCGGATGATGGCCTCCCGTG--------CTACT-CG-GTGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAA--GTCACGGCGAGTGGTGG---TAGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTTCGCGGG-CTAA-AGACCCTT----GA-GCCGC--------GTCAGCGTGGCTCTCCGACCGC Ipomoea_parasitica TCGAAACCTGC-A-CAGCAGAACGACCGGAGAACGAGTTTGTT-ATT---CAC---ACTT-GTCGTCC----GGAGA--------------------------------C-TCGTCTCTCGGGC----GACCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCTTATCGAGATGGCCAGCCCGCCCTCGCCCCGTTACTGCGGATCGCTTGGGTAGG---CGTCGGCGTCTTACT-AAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TTCTCGGCCCTT------CGGCC----TAGTATGGGG-AGCGGATGGTGGCCTCCCGTGCCCC----CACAT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCC-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TAGTACCA-A--GCGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGG-AGAT-AGACCCTT-AACGA-GCCGT--------ACGTACGTGGCTCTCCGACCGC Ipomoea_praematura TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTATGTT-GTTTTTCAC---TCCTT-TCGTCC----GGG----------------------------------C-TAG--TCCCGGGCGATAGATTAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCCTATTGAGATCGCCAGT-TACCCTTGCCCCGTTATTGCGGATCGCAAGGG-CGG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCC-TGCTTGGCCCTCTGGC--CGAG-----TACG--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----CAACTGCG-CGGCGCGGATGGCCCAAA-TGCGAGCGAGTCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GCGTGCATTATCTTC-----GCGTCGTGCCCCCGTCGTTCGGTGG-CGAA-TGACCCTATCTAGA-GCCGC--------GTCGGTGTGGCTCTCCGACCGC Ipomoea_pubescens TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TATC-GTCGTCC----GGAGA--------------------------------C-TTG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGACGGCCGGCC-GCCCTTGCACCGTTATCGCGGATTGCTTGGG--GG---CGTCGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TTCTTGGT----------CGAGCGGCCGAGCTTGGGG-AGCGGATGGTGGCCTCCCGTG--------CAACT-CG-GGGTGCGGCCGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAT--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTCC-----GTGCCGTGCCCCCGTCGTTCGCGGG-CAAA-AGACCCTT----GA-GCTGC--------ATCAGTGTGGCTCTCCGACCGC Ipomoea_purga TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACATGTTTGTT-ATC---CAC---CCTTC-TCGTTCC---GTGGTGTGTCCC-TCCTCC-----TAGGCGGAG-GG-C-TTG--CCTCGGGC----GATCAACTAACCCCCGGCGCGGAATGCGCCAAGGAATACCGTATTGAGATGGCCAGC-TGCCCTTGCACCGTTATTGCGGATCGCTCGGG--GG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCC---TGCTAGGCCCCTT-GGT-CGAG------TGT--GGGG-AGCGGATTATGGCTTCCCGTG--------CAAAT-TG-ACGCGCGGTTGGCCCAAA-TGCGAG----CCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TGGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTTTGTGGG--AAAATGACCCTG----GA-GCCAT--------GTCATTGTGGCTCTCCGACCGC Ipomoea_purpurea TCGAAACCTGCCA-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TATC-GTCGTCC----GGAGA--------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGCATCGAGACGGCCCGCC-GCCCTTGCACCGTTATCGCGGATTGCTTGGG-CGG---CGTCGGCGTCTTACT-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCT--TTCTTGGTCGAGCGGC--CGAG-----CTT---GGGG-AGCGGATGGTGGCCTCCCGTGCCCCC---TAACT-CG-GGGTGCGGCTGGCTCAAA-TGCGAG----TCCCC-GGCGGCGGAT--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTCC-----GCGTCGTGGCCCCGTCGTTCGTGGG-CAAA-AGACCCTTCGACGA-GCTGC--------AGCAGTGTGGCTCTCCGACCGC Ipomoea_quamoclit TCGAAACCTGC-ACCAGCAGAACGACCTGAGAACGTGTTTGTT-ATT---CAC---TCTCT-TCGTTC----GGG----------------------------------C-TAG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCCTACTGAGATGGCCGGC-TGCCCTTGCCCCGTTATTGCGGATCGCGAGGG-AGG---CGTCGGCGTCTTGCT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCT-CGCTCGT-----------CGAG-----TGCG--GGGG-ATCGGATGATGGCCTCCCGTGCCC-----CAAACGCG-CGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGCAGTATCTTC-----GCGCCGTGCCCCCGTCGTTCGGTGG-CGGA-TGACCCCAACCGGA-GCCAC--------GCGAGCGTGGCTCTCCGACCGC Ipomoea_santillanii TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTT-ATCGTCC----GGGGA--------------------------------C-TTGTCTCTCGGGC----GATCAACTAACCCCCGGCGCGGAACGCGCCAAGGAATACCTTATCGAGATGGCCGGCCTGCCCTTGCCCCGTTAATGCGGATCGCTAGGT--GG---CGTCGGCGTCTTACT-AAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TCCTTGGCCCTTAGGT--CGAG-----TTT---GGGG-AGCGGATGGTGGCCTCCCGTGCGC---------T-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCATGGCGGCGGAC--GTCACGGCGAGTGTTGG---TCGTACCC-A--GCGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGA-CAA--AGACCCTTGAGCCA-TCCAT--------GCAAGTTTGGCTCTCCGACCGC Ipomoea_seducta TCGAGACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTTGTT-ATC---CAC---A--TC-T-GTCGACC-GGGGCGCGTCCCCTCCTCCTCTC-GGAGGGGGGCGG-C-TCG--CTTCGGGC----GATCAACGAACCCCCGGCGCGGAACGCGCCAAGGAATACTACATCGAGACGGCCCGC-TTCCCTTGCACCGTTCTTGCGGACTGCTCGGG--GGCAACGGCCAAGTCTTACC-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCGACC--CCGCTTGGCCTCTC-GGT-CGAG------CGC--GGGG-AGCGGATGGTGGCCTCCCGCG--------CAAGT-CG-GGGCGCGGCCGGCTAAAAATGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC--TTCGCGTCGTGCCCCCGCCGTTCGTGGC-CGAAACGACCCTA----GA-GCTGC--------CTAAGCGCGGCTCTCCGACCGC Ipomoea_sesscosiana TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTT-ATCGTCC----GGAGA--------------------------------C-CTG--TCTCGGGC----GACCAACTAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCAGCCTGCCCTTGCCCCGTTACTGCGGATCGCTAGGG--GG---CGTCGGCGTCTTACT-TAATAAA------TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTTGGCCCCTTGGT--CGAG-----TTT---GGGGAAGCGGATGATGGCCTCCCGTG--------CAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCCGTCGTCCACGAGCGAA-AGACCCTT----GA-GTCAC--------GTCATTGTGGTTCTCCGACCGC Ipomoea_stans TCGAAACCTGC-A-TAGCAGAACGACCAGAGAACACGTTTGTT-ATT---CAC---TCTT-ATCGTCC----GGAGA--------------------------------C-TTG--TCTCGGGC----GACCAACTAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCAGCCTGCCCTTGCCCCGTGACTGCGGATCGCTAGGG--GG---CGTCGGCATCTTACT-TAATAAA------TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC--TGCTTGGCCCCTTGGT--CGAG-----TTT---GGGG-AGCGGATGATGGCCTCCCGTG--------CAACT-CG-GGGCGCGGCTGGCTCAAA-TGCGAG----TCCCT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCCGTCGTCCGCGAGCGAA-AGACCCTT----GA-GTCAC--------GTCATTGTGGTTCTCCGACCGC Ipomoea_ternifolia TCGAAACCTGC-C-TAGCAGAACGACCAGAGAACGTGTTTGTT-ATT---CAC---TCTTT-TCGCCC----GGG----------------------------------T-TAT--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACTGTATTGAGATGGCCAGC-TGTCCTCGCACCGTTTTTGCGGATTGCTAAGG-ATG---CGTCGGCGTCTTACT-TAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCGCAACCCC-TGCTTGGCTATTTGGT--TGAG-----TGAG--GGGG-AGCGGATGGTGGCCTCCCGTGCCA-----CAATT-GGAAGGCGCGGCTGGCTCAAA-TT-CAA----GTCCCTGGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCT-A--GTGTGC-ATATCTTC-----GCGTCGTGCCCCCGTCGTTCTGCGG-CGAA-TGACCCTATCCAGA-GCCAT--------GTGAATGTGGCTCTCCGACCGC Ipomoea_tricolor TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACACGTTTGTC-ACGATCTAC---TCTC-GTCGTCC----GGAGA--------------------------------CATCGTCTCCCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGACGGCCAGCCTGCCCGCGCCCCGTTATCGCGGACCGTCAGGC-AGG---CGTCGGCGTCTTACT-CAAAAAAAAAA--TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCC---GCTTT------------CGAG-----CGC---GGGG-AGCGGATGATGGCCTCCCGTGCCCC----CAACT-GG-GGGCGCGGCCGGCCCAAA-TGCGAG----TCCCC-GGCGGCGGAC--GTCGCGGCGAGTGGTGGTAATCGTACCC-A--GTGTGC-ATATCTTC-----GCGCCGTGCCCCCGTCGTCCGCGGG-CAAG-AGACCCTC-AACGA-GTCAC--------GTCACCGTGGCCCTCCGACCGC Ipomoea_tuboides TCGAAACCTGC-A-CAGCAGAACGACCGGAGAACACGTTTGTT-ATT---CAC---TCTCA-TCGTCGTCTCGAGA---------------------------------C-TCG--TCTCGGGC----GATCAACCAACCCCCGGCGCGGAACGCGCCAAGGAATACCGTATCGAGATGGCCAGC-CGCCCTTGCCCCGTTAATGCGGATCGCTCGGG-AGG---CGTCGGCGTCTTAAG-CAATAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCCC-GCCTGCTTT---------CGAG---C-TCGG--GGGG-AGCGGATTATGGCCTCCCGTGCAC-----CCACT-CG-GTGCGCGGCTGGCTCAAA-TGCGAG----TCCCC-GGCGGCGGAA--GTCACGGCGAGTGGTGG---TAGTACCC-A--GCGTGC-ATATCTTC-----GCGCCGTGACCCCGTCGTTCGCGGG-CAAA-AGACCCTT-GACGA-GCCAC--------GTCAGCGTGGCTCTCCGACCGC Ipomoea_uhdeana TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGCGTTTGTT-ATC---CAC---A--TC-T-GTCGACC-GGGGCGGGTCCCTTCCTCCTCTCAGGACGGGGGCGG-C-TCG--CTTCGGGC----GATCAACGAACCCCCGGCGCGGAAAGCGCCAAGGAATACTACATCGAGACGGCCCGC-TTCCCTTGCACCGTTCTTGCGGACTGCTCGGG-AGGCAACGGCCAAGTCTTACC-TAACAAAA-----TACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCACC--CCGCTCGGCCTCTC-GGT-CGAG------CGC--GGGG-AGCGGATGGTGGCCTCCCGTGCCCCCTCACAAGT-CG-GGGCGCGGCCGGCTAAAA-TGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCC-A--GTGTGC-ATATCTTC--TTCGCGTCGTGCCCCCGCCGTTCGCGGC-CCAAACGACCCT--AGCGA-GCCGC--------CTAAGCGCGGCTCTCCGACCGC Ipomoea_variabilis TCGAAACCTGC-A-CAGCAGAACGACCAGAGAACGTGTTTGTTTATC---CAC---ATTTC-TCGTTC----GGGGTGCGTCCTTTCCTCCTGCC-GGAGGGGAG-GG-C-TAG--CCTCGGCC----GATTAACGAACCCCCGGCGCGGAACGCGCCAAGGAATATCGTATCGAGATGGCCAGC-TTCCCTTGCCCCGTTATTGCGGATCGCTCGGG-AGG---CAGCGGCGTCTTACT-TAATAAAA-----TATGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCGTTAGGCCGAGGGCACGTCTGCTTGGGCGTCACGCATCGCGTCGCACCTCTCTGCTTGGCCTCTTTGGT-CGAG------TGC--GGGG-AGCGGATGATGGCCTCCCGTGCCC-----CCAGT-CG-GGGTGTGGCTGGCTAAAA-CGCGAG----TCCTT-GGCGGCGGAC--GTCACGGCGAGTGGTGG---TCGTACCA-A--GTGTGC-ATATCTTC-----GCGCCGTGTCCCTGTCGTTCGTGGG-CGAAATGACC-TT-AATGATGCCAT--------GTTAGTGTGGCTCTCCGACC-- ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Ipomoea_ITS) = N: 1-689; CODONPOSSET CodonPositions (CHARACTERS = Ipomoea_ITS) = N: 1-689; END; [ The following blocks are output data for analysis step 5555 ] BEGIN TREES; TITLE Tb11214; LINK TAXA = TaxaForAnalysisStep5555; TREE RAxML = [&R] (Ipomoea_cairica,(((Ipomoea_seducta,(Ipomoea_dumosa,Ipomoea_uhdeana)),(Ipomoea_aristolochifolia,(Ipomoea_variabilis,Ipomoea_meyeri),Ipomoea_expansa)),((Ipomoea_purga,Ipomoea_dumetorum),(((Ipomoea_quamoclit,(Ipomoea_coccinea,((Ipomoea_cholulensis,Ipomoea_lobata),((Ipomoea_funis,Ipomoea_hastigera,(Ipomoea_praematura,Ipomoea_hederifolia)),Ipomoea_neei)))),((Ipomoea_ternifolia,Ipomoea_costellata),Ipomoea_chamelana)),((Ipomoea_muricata,Ipomoea_santillanii,Ipomoea_alba),((Ipomoea_ancisa,(Ipomoea_stans,Ipomoea_sesscosiana)),((((Ipomoea_marginata,Ipomoea_tricolor),Ipomoea_cardiophylla),Ipomoea_barbatisepala),(((Ipomoea_parasitica,(Ipomoea_microsepala,Ipomoea_minutafolia)),((Ipomoea_chenopodifolia,Ipomoea_orizabensis),Ipomoea_tuboides)),((Ipomoea_ampullacea,Ipomoea_mairetii),(Ipomoea_neurocephala,(Ipomoea_lindheimerii,((Ipomoea_purpurea,Ipomoea_pubescens),(Ipomoea_nil,Ipomoea_indica))))))))))))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr6751] END;