#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on November 11, 2026; 5:32 GMT TreeBASE (cc) 1994-2008 Study reference: Ghimire S.R., Charlton N., Rudgers J., Young C., & Craven K. 2010. Prevalence of an intra-specific Neotyphodium hybrid in natural populations of Stout Wood Reed (Cinna arundinacea L.) from eastern North America. Mycologia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10445] [ The following blocks are input data for analysis step 5923 ] BEGIN TAXA; TITLE TaxaForAnalysisStep5923; DIMENSIONS NTAX=38; TAXLABELS Epichloe_amarillans_Ah Epichloe_amarillans_So Epichloe_baconii_As Epichloe_baconii_At Epichloe_baconii_Cv Epichloe_brachyelytri_Bee1 Epichloe_brachyelytri_Bee2 Epichloe_bromicola_Be1 Epichloe_bromicola_Be2 Epichloe_clarkii_Hl Epichloe_elymi_Ec Epichloe_elymi_Evr Epichloe_festucae_Frr Epichloe_glyceriae_Gs1 Epichloe_glyceriae_Gs2 Epichloe_sylvatica_Bs1 Epichloe_sylvatica_Bs2 Epichloe_typhina_Ao Epichloe_typhina_Bp1 Epichloe_typhina_Bp2 Epichloe_typhina_Bp3 Epichloe_typhina_Dg1 Epichloe_typhina_Dg2 Epichloe_typhina_Lp1 Epichloe_typhina_Lp2 Epichloe_typhina_Lp3 Epichloe_typhina_Pn1 Epichloe_typhina_Pn2 Epichloe_typhina_Pn3 Epichloe_typhina_Pp1 Epichloe_typhina_Pp2 Epichloe_typhina_Pp3 Epichloe_typhina_Pp4 Epichloe_typhina_Pp5 Epichloe_typhina_Ps1 Epichloe_typhina_Ps2 Neotyphodium_x_schardlii_Ca1 Neotyphodium_x_schardlii_Ca2 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M5283] TITLE Tef; LINK TAXA = TaxaForAnalysisStep5923; DIMENSIONS NCHAR=777; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=~ GAP= .; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Epichloe_amarillans_Ah GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTAACTTGTTTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAATATATTCTAC..TCCTCTCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCTTC.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGAGCTAGAAGAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTGG..............CCCCCC....AAAAAAAA.TTGTGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTC.TTCTAACCCGATCTGCATCATTAACGTGCATCTATTAG Epichloe_amarillans_So GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTAACTTGTTTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAATATATTGTAC..TCCTCTCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...TGGGTGG....GCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCT.CTTTTTCGCCCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGAGCTAGAAGAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTGG..............CCCCCC....AAAAAAAA.TTGTGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTC.TTCTCACCCGATCTGCATCATTAACGTGCATCTATTAG Epichloe_baconii_As GTTGACTTTGACCTGTATCATTTGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTAC..CCCTCTCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACTT.............TGCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGAGCTTGAAGAC.GCAAACGAGAGAGACAGAA.....CATGACATTCGCGTGG..............CCCCCC....AAAAAAAA.TTGCGATAAAAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TACCAACCCGATCTGTATCATTAACGTGCATCTATTAG Epichloe_baconii_At GTTGACTTTGACCTGTATCATTTGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTAC..CCCTCTCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACTT.............TGCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGAGCTTGAAGAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTGG..............CCCCCC....AAAAAAAA.TTGCGATAAAAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TACCAACCCGATCTGTATCATTAACGTGCATCTATTAG Epichloe_baconii_Cv GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTAC..CCCTCTCACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACTT..............GCCCCT.CTTTTTCGCCCGCGATACGAAA.TTTTTTTTT......CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.AAGCTAGAAGAC.GCAAAC..GAGAGACATGA.....CATGACATTCGCGTGG..............CCTCCC...AAAAAAAAA.TTGTGATGACAAATTACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGATACACTAGACTC.TATCAACCCGATCTGTATCATTAACGTGCATCTACTAG Epichloe_brachyelytri_Bee1 GTCGACTTTGACCTGTATCATTCGATGTATTGGAAAACAGTTGCTAACTTGTCTTCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.AGTGG....GCAAGCAAGCATCT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTTGGTCT.GAGCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTGA..............CCTCCC....AAAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGTGCATCTATTAG Epichloe_brachyelytri_Bee2 GTCGACTTTGACCTGTATCATTCGATGTATTGGAAAACAGTTGCTAACTTGTCTTCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCATCT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTTGGTCT.GAGCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTGG..............CCTCCC....AAAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGTGCATCTATTAG Epichloe_bromicola_Be1 GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTCGCTAACTTAACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCGAGCAAGCATCT...............GCCCCT.C.TTTTCGCCCGCGATACGAA.CTTTTTTTTTTTTTT.CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.AAGCTAGA.GAC.GCAAACGAGAGAGTCATGA.....CATGACATTCGCGTG..............CCCTCCC...AAAAAAAAA.CTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCTTATCAACCTGATCTGTATCACTAACGTGCATCTACTAG Epichloe_bromicola_Be2 GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTCGCTAACTTAACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGACATTCTTCTTTCACCTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCGAGCAAGCATCT...............GCCCCT.C.TTTTCGCCCGCGATACGAA.CTTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.AAGCTAGA.GAC.GCAAACGAGAGAGTCATGA.....CATGACATTCGCGTG..............CCCTCCC..AAAAAAAAAAA..GTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTC.TATCAACCTGATCTGTATCACTAACGTGCATCTACTAG Epichloe_clarkii_Hl GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTTTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TCTTCGCCCGCGATACGAA..TTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCAATCTGTATCATTAACGCGCATCTATTAG Epichloe_elymi_Ec GTTTACTTTGACCTGTATCATTCGATGTATCGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTGACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCATCT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCACT.GGTCT.AAGCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGGGATTCGCGTGG..............CCTCCC....AAAAAAAA.CTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGATCTGTATCATTAACGTGCATCTTTTAG Epichloe_elymi_Evr GTTTACTTTGACCTGTATCATTCGATGTATCGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAATTGACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCATCT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCACT.GGTCT.AAGCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGGGATTCGCGTGG..............CCTCCC....AAAAAAAA.CTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGATCTGTATCATTAACGTGCATCTTTTAG Epichloe_festucae_Frr GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTGACTTGTCTGCCAACAGGGGTACGTACTGCAAAATATCACTCGCCGCTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGATTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTAAGATATTTTAC..CCCTCTCACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACTT..............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTATGACTTTTGGTGGGGCACCT.TCAACCCGTCACT.GGTCTTGAGCTAAAAAAC.GCAAACGAGAAAGACATGA.....CATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCCCC....AACAAA.TTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.CACCAACCCGATCTGTATCATTAACGTGCATCTATTAG Epichloe_glyceriae_Gs1 GTTGACTTTGACCTGTATCATTCGATGTATTGGATACCAGTTGCTAACTTGTCTGCTAACAGGGGTGCGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTTGAGAAGGTAAGATACTCTTCTTTCACGTCGCGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGGGCAAGCAAGCAAGCAACT...............GCCCCT.C.TTTTCGCCCGCGATTCGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GTTAT.GAGCTAGA.GAC.GCAAACGAGAGAGACATGACATGGCATGACATTCGCGTGG..............CCTCCC...AAAAAAAAA.CTGTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.CATCAACCCGATCTGTATCATTAACGTACATATACTAG Epichloe_glyceriae_Gs2 GTTGACTTTGACCTGTATCATTCGATGTATTGGATACCAGTTGCTAACTTGTCTGCTAACAGGGGTGCGTACTGCGAAATATCACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCACCACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCGAGAAGTTTGAGAAGGTAAGATACTCTTCTTTCACGTCGCGCATAATATGTGATGTTCAGTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCT...T.GGTGGGCAAGCAAGCAAGCAACT...............GCCCCT.C.TTTTCGCCCGCGATTCGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GTTAT.GAGCTAGA.GAC.GCAAACGAGAGAGACATGACATGGCATGACATTCGCGTGG..............CCTCCC...AAAAAAAAA.CTGTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.CATCAACCCGATCTGTATCATTAACGTACATATACTAG Epichloe_sylvatica_Bs1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC....AAAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTC.TATCGACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_sylvatica_Bs2 GTTGACTTTGCCCTGTATCGCTCGATGTATCGGATAACAGTTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACATACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTTTT..CAGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTC.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Ao GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............TCTCCC...AAAAAAAAA..TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Bp1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTTCACGCATAATATGTGACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGACCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CGTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCCTGGTCGACAAATTAGACTA.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Bp2 .......................GATGTATTGGATAACAGTTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTTCACGCATAATATGTGACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGACCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CGTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTCGGTCGACAAATTAGACTA.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Bp3 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTTCACGCATAATATGTGACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGACCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CGTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCCTGGTCGACAAATTAGACTA.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Dg1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATTCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............TCTCCC....AAAAAAAA..TGTGATGACAAATCACTGACTTGTCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Dg2 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATTCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............TCTCCC....AAAAAAAA..TGTGATGACAAATCACTGACTTGTCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Lp1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATACA..A.....CATGACATTCGCGTGA..............TCTCCC....AAAAAAAA..TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Lp2 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATACA..A.....CATGACATTCGCGTGA..............TCTCCC....AAAAAAAA..TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Lp3 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATACA..A.....CATGACATTCGCGTGA..............TCTCCC....AAAAAAAA..TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pn1 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pn2 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pn3 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTT....CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pp1 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCTCCT.C.TTTTCGCCCGCGATACGA..GTTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pp2 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCTCCT.C.TTTTCGCCCGCGATACGAG..TTTTTTTTTTTTTT.CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pp3 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCTCCT.C.TTTTCGCCCGCGATACGAG..TTTTTTTTTTTTTTTCGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pp4 GTTGACTTTAACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTT.CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Pp5 GTTGACTTTAACCTTTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACTTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTTGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Ps1 GTTGACTTTAACCTTTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACTTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTTGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Epichloe_typhina_Ps2 GTTGACTTTAACCTTTATCGCTCGATGTATTGGATAACAGCTGCTAACTTGTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAATTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACTTCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTTGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTGA..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGATCTGTATCATTAACGCGCATCTATTAG Neotyphodium_x_schardlii_Ca1 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAG.GTTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGATCTGTATCATTAACGCGCATCTATTAG Neotyphodium_x_schardlii_Ca2 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTTGTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAATTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCACCACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCT...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT.C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTTACT.GGTCT.GTGCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGATATTCGCGTGA..............CCTCCC......AAAAAA.TTGTGATGACAAATCACTGACTTGCGTTTTCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGATCTGTATCATTAACGCGCATCTATTAG ; END; BEGIN CODONS; CODONPOSSET CodonPositions (CHARACTERS = Tef) = N: 1-777; CODONPOSSET * CodonPositions (CHARACTERS = Tef) = N: 1-777; END; [ The following blocks are output data for analysis step 5923 ] BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_9 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1)))),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8653] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_7 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1)))),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8651] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_21 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,((((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8665] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_15 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2))),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8659] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_5 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),((((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8649] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_22 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,((((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8666] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_14 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2))),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8658] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_20 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,((((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8664] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_1 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),((((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8645] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_8 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1)))),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8652] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_10 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1)))),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8654] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_2 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),((((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8646] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_6 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),((((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8650] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_4 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),((((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8648] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_17 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2))),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8661] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_16 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2))),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8660] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_13 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2))),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8657] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_23 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,((((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8667] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_24 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,((((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8668] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_19 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,(((Epichloe_baconii_Cv,((((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At)),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8663] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_12 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1)))),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8656] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_18 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2))),(((Epichloe_clarkii_Hl,((((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4)),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8662] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_3 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec))),((((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1))),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),((Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8647] END; BEGIN TREES; TITLE Sita_tef_final; LINK TAXA = TaxaForAnalysisStep5923; TREE PAUP_11 = [&R] (Epichloe_amarillans_So,(Epichloe_amarillans_Ah,((Epichloe_baconii_Cv,(((Epichloe_brachyelytri_Bee1,Epichloe_brachyelytri_Bee2),(((Epichloe_clarkii_Hl,(((Epichloe_typhina_Lp1,Epichloe_typhina_Lp2,Epichloe_typhina_Lp3),(Epichloe_typhina_Dg1,Epichloe_typhina_Dg2),Epichloe_typhina_Ao),(Epichloe_typhina_Ps1,Epichloe_typhina_Ps2,Epichloe_typhina_Pp5)),Epichloe_typhina_Pp4),(Epichloe_sylvatica_Bs1,Epichloe_sylvatica_Bs2,((Epichloe_typhina_Bp1,Epichloe_typhina_Bp3),Epichloe_typhina_Bp2))),(((Epichloe_typhina_Pn1,Epichloe_typhina_Pn2,Epichloe_typhina_Pn3),Neotyphodium_x_schardlii_Ca2),(((Epichloe_typhina_Pp1,Epichloe_typhina_Pp3),Epichloe_typhina_Pp2),Neotyphodium_x_schardlii_Ca1)))),(((Epichloe_bromicola_Be1,Epichloe_bromicola_Be2),(Epichloe_elymi_Evr,Epichloe_elymi_Ec)),(Epichloe_glyceriae_Gs1,Epichloe_glyceriae_Gs2)))),(Epichloe_baconii_As,Epichloe_baconii_At),Epichloe_festucae_Frr))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr8655] END;