#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 02, 2024; 20:30 GMT TreeBASE (cc) 1994-2008 Study reference: Sultan A., Johnston P., Park D., & Robertson A. 2010. Two new pathogenic ascomycetes in Guignardia and Rosenscheldiella on New Zealand’s pygmy mistletoes (Korthalsella: Viscaceae). Studies in Mycology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10523] [ The following blocks are input data for analysis step 6102 ] BEGIN TAXA; TITLE TaxaForAnalysisStep6102; DIMENSIONS NTAX=22; TAXLABELS Botryosphaeria_dothidea_AY259092 Guignardia_aesculi_AB095504 Guignardia_bidwellii_AB095509 Guignardia_citricarpa_AF374364 Guignardia_citricarpa_AY042917 Guignardia_gaultheriae_AB095506 Guignardia_mangiferae_AB041233 Guignardia_mangiferae_AY277711 Guignardia_philoprina_AB095507 Guignardia_philoprina_AF312014 Phyllosticta_beaumarisii_AY042927 Phyllosticta_eugeniae_AY042925 Phyllosticta_hypoglossi_AY042923 Phyllosticta_owaniana_AF312011 Phyllosticta_podocarpi_AF312013 Phyllosticta_pyrolae_AB041242 Phyllosticta_pyrolae_AF312010 Phyllosticta_spinarum_AF312009 Phyllosticta_spinarum_AY042907 Phyllosticta_telopeae_AY042909 Phyllosticta_vaccinii_AB095508 Rosenscheldiella_korthalsellae_PDD94884 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M5815] TITLE Guignardia_Matrix_F6; LINK TAXA = TaxaForAnalysisStep6102; DIMENSIONS NCHAR=600; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] Botryosphaeria_dothidea_AY259092 TTACCGAGTTGATTC------------------------------------------------------GGGCTCCGGCCCGATCC-TCCCACCCTTTGT-GTACCT-ACCTCTGTTGCTTTGGCGGGCCG---CGGTCC----TCCG---CGGCCGGCCCCCCTCCCCGGGGG---GTGGCCAG--CGCCCGCCAGAGGACC---------ATCAAACTCCAGTCAGTAAACGATGCA-GTC-TGAA-AAA-CATTTAATAAACT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCT---TTGCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTT-GCCTCAAGCGTAGTAG-AACATACATCTCGCTTCGGAGC-GCAGGGCGTC-GCCCGCC-GGACGA----ACCTTCTG-AACTTT-----TCTCAA Guignardia_aesculi_AB095504 TTACTGACCT--A-TAA----T-CTCTTT---GAAAGGTCGCCGGTACCCGGTCCCCCCCCAAAAAGGGGGGCCGGGGAAGGTCCTCTCACACCCCTTGT-GTACCTTACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCTAC-----GGGGCCAGGACGTCCGGCTAAGCGCCCGCCAGTACATAAAACTCCAGCGATCATTTCGTGTC-GTCCTGATGAAATTATTCAATTAATC-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCACGGCCTCGAGCGTAGTAGTAAAAT--T-CTCGCTTTGGAGC-GCTGGACGACGGCC-GCC-GGACAA-TCGACCTTCGGTCTAAACAAC--TTCCAA Guignardia_bidwellii_AB095509 TTACTGAAAT-TAGTAA----CCTTC------GAAAGG--ATCG--AGTAGGCCGGCCCT--CGAAAGCCGGCCGAAAGAGCCCTTCTCACCC---TTGT-GTACCTTACCA-CGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCCGCG-----GGCCAGGACGTCCGGCCAAGCGCCCGCCAGTATACAAAACTCAAGCGATTATCTTGTGAA-GTCCTGACGC-ATCATTCAATTGATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CCGTCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCCCAGCCTCGAGCGTAGTAGTAAC----ATCTCGCTTTGGAGC-GCTGGGCGACGGCC-GCC-GGACAA-CCGACCTACGGTCT-AATTTT--TCCAAA Guignardia_citricarpa_AF374364 ----TGAAAT-ACGTAAT----CCT-------GAAAGGTGATGGAAGGGAGGCCTT-----AAAAAAGCCGCCCGAC--CT--ACCTTCACACCC-TTGT-GTATCT-ACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-TGACCCGGG-CGGTCGGCGCCCCCAGCCTAGTC-TCTAGGCCAGGACGCCTGGCTAAGTGCCCGCCAGTATACAAAACTCCAGCGATTATTCTGTGTA-GTCCTGAGAA-TTCATTTAATGAAAT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTGGAAGACCTCGGCGACGGCGTCTCAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTTTGGAGG-AGGGGGGCGCTGGCCGCC-GGACAA-TCGACCTTCGGTCACTATTT---TTCCAA Guignardia_citricarpa_AY042917 ---CTGAAAT-ACGTAAT----CCT-------GAA-GGTGATGGAAGGGAGGCCTT-----AAAAAAGCCGCCCGAC--CT--ACCTTCACACCC-TTGT-GTATCT-ACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-TGACCCGGG-CGGTCGGCGCCCCCAGCCTAGTC-TCTAGGCCAGGACGCCTGGCTAAGTGCCCGCCAGTATACAAAACTCCAGCGATTATTCTGTGTA-GTCCTGAGAA-TTCATTTAATGAAAT-AA-------------------------------------------------------------------------------------------------CTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTGGAAGACCTCGGCGACGGCGTCTCAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTTTGGAGG-AGGGGGGCGCTGGCCGCC-GGACAA-TCGACCTTCGGTCACTATTT---TTCCAA Guignardia_gaultheriae_AB095506 TTACTGAACT--AGTA-----TTCTCT-----GAAAGGTCGCCGGTACCCGGTCCCCCCT-AAACAAGGGGGCCGGGGAAGGTCCTCTCACACCC-TTGTTGTACCTTACCA-TGTTGCTTTGGCGG-CCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCC-TC----ACCGGCCAGGACGTCAGGCTAAGCGCCCGCCAGTATACAAAACTCCAGCGATTATTTCGTGCA-GTTCTGAT-AAATTATTCAATTAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCTTAGCCTCGAGCGTAGTAGTAACAT----CTCGCTTTGGAGT-GCTAGGCGTTGGCC-GCC-GGACAA-TCGACCTTTGGTCTATT--AC--TTCCAA Guignardia_mangiferae_AB041233 TTACTGAAAT---GTAATAACTTCTATT----GAAAGGTTCCAG--AGTAGGCGCT------ACAACGCCGAAATGA-------CCTTCTCACCC-TTGT-GTA-CTCACTA-TGTTGCTTTGGCGGGTCGACCTGGTTC-CGACCCAGG-CGGCCGGCGCCCCCAGCCTTAACT----GGCCAGGACGCCCGGCTAAGTGCCCGCCAGTATACAAAACTCAAGAATTCATTTTGTGAA-GTCCTGAT-ATATCATTTAATTGATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCAACGTCCG--CTGCCGGACGTGCCTTGAAGACCTCGGCGACGGCGTCCTAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTTTGGAGT-GCTGGGCGACGGCC-GCC-GGACAA-TCGACCTTCGGTCTATTT-----TTCCAA Guignardia_mangiferae_AY277711 TTACTGAAAT---GTAATAACTTCTATT----GAAAGGTTCCAG--AGTAGGCGCT------ACAACGCCGAAATGA-------CCTTCTCACCC-TTGT-GTA-CTCACTA-TGTTGCTTTGGCGGGTCGACCTGGTTC-CGACCCAGG-CGGCCGGCGCCCCCAGCCTTAACT----GGCCAGGACGCCCGGCTAAGTGCCCGCCAGTATACAAAACTCAAGAATTCATTTTGTGAA-GTCCTGAT-ATATCATTTAATTGATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCAACGTCCG--CTGCCGGACGTGCCTTGAAGACCTCGGCGACGGCGTCCTAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTTTGGAGC-GCTGGGCGACGGCC-GCC-GGACAA-TCGACCTTCGGTCTATTT-----TTCCAA Guignardia_philoprina_AB095507 TTACTGAACT--AGTAA----TTCTCT-----GAAAGGTCGCCGGTAGGGGGTCCCCCTT-AAACAAGGGGCCCCCCGAAGGTCCTCTCACACCC-TTGT-GTACCTTACCA-CGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCC-TCC----GGGGCCAGGACGTCAGGCTAAGCGCCCGCCAGTAAACAAAACTCCAGCGATTATTTTGTGTA-GTCCTGACG-AATTATTCAATTAATTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGATTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCCCAGCCTCGAGCGTAGTAGTAACAT--ATCTCGCTCTGGAGT-GCTGGGCGTTGGCC-GCC-GGACAA-TCGACCTTCGGTC-ACTATTT--TTCCAA Guignardia_philoprina_AF312014 TTACTGAACT--AGTAA----TTCTCT-----GAAAGGTCGCCG-TAGGGGGCCCCCCCT-AAACAAGGGGCCCCC-GAAGGTCCT-TCACACCC-TTGT-GTACCTTACCA-CGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCTCC----AGGGCCAGGACGTCAGGCCAAGCGCCCGCCAGTAAACAAAACTCCAGCGATTATTTCATGCG-GTCCTGAT-AAATTATTCAATTAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGATTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCCCAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTCTGGAGT-GCTGGGCGTTGGCC-GCC-GGACAA-CCGACCTTCGGTC-ACTATTT--TTCCAA Phyllosticta_beaumarisii_AY042927 ---CTGAGATGAAGTAA----TTCCCTC----GAAAGGCCTTCG--ATTAGGCCGGCCCC--TCGG-GCCGGCCGAAAGAACCTCTCGCACCC---TTGCCGTACCTCACCG-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCTCAGC----GGCCAGGACGCCTGGCCAAGTGCCTGCCAGTACACAAAACTCCAGCGATTATCCCGTGCA-GTCCTGAAAC-ATCATTAAATTGAATCAA-------------------------------------------------------------------------------------------------CTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGGCGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGCCACAGCCTCGAGCGTAGTAGTGAAAT--ATCTCGCTCTGGAGCCGCTGGGCGACGGCC-GCC-GGACAA-TCGACCTTCGGTCTGAATTTT---TCCAA Phyllosticta_eugeniae_AY042925 ---CTGAAAT-ATGTAA----TTCTCA------AAAGGTCCCTCG-AGTAGGCCGGCCCT--AAAAAGCCGGTCGAAAGAGCCCTTCTCACCC---TTG?TGTACCTTACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCCTTAC-CG-GGCCAGGACGCCCGGCTAAGTGCCCGCCAGTATACAAAACTCAAGCGATTATTTTGTGAA-GTCCTGACAT-ATCATTCAATTGATT-AA-------------------------------------------------------------------------------------------------CTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTTGAAGACCTCGGCGACGGCGTCTCAGCCTCGAGCGTAGTAGTTAA-T--ATCTCGCTTTGGAGT-GTTGGGCGACGGCC-GCC-GGACAA-TCGACCTTCGGTCC--ATTTT--TCCGAA Phyllosticta_hypoglossi_AY042923 ---CTGAAA--ATGTAATAA-CCCT---TTAGGATCT??AAG----GGGGAGCCGT-----CGAACGCTCCCCTGT?--ACTGTGCCTCACACCC-TTGT-GTTT?T-ACCA-TGTCGCTTTGGCGGGCCGACCCGGCTT-TGACCCGGG-CGGCCGGCGCCCCCAGCCTAGTCTT?TAGGCCAGGACGCCCGGCTAAGTGCCCGCCAGTATACAAAACTCCAGCGATTATTCTGTGTAAGTCCTGAGAA-T?TATTCAATGAATT-AA-------------------------------------------------------------------------------------------------CTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCTG--CCGTCAGACGCGCCTGGAAGACCTCGGCGACGGCATCCCAGCCTCGAGCGTAGTAGTAAAAC--ATCTCGCTTTGGAGG-ATGGGGTGACGGCTTGCC-GGACAA-CCGACCTCTGGTCATTTTTTTTTTTCCAA Phyllosticta_owaniana_AF312011 ---CTGAATT-TACCAGTAT--CCT---TTAGGAGAGAGGCCCC--GGGGAGCCGT-----GAAAAGCTCCCCGGGCTGCCCACCCTCCACACCC-TTGT-GTACCT-TCTA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCCCTAAACAGGGCCAGGACGTCTGGCTAAGTGCCCGCCAGTATACAAAACTCGAACTATGATCTT-CGCG-GTTCTGAATAAATTTTTTAATGAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCGGTCAAACGGACGCGCCTGGAAGACCTCGGCGACGGCGTCTCAGCCTCGAGCGTAGTAGAATCTTTCATCTCGCTCTGGAGG-AGGGGACGGC-GCCTGCC-GGACAA-TCGACCTTCAGTCTATTTTTT--T-CTAA Phyllosticta_podocarpi_AF312013 TTACTGAACT-TAACAGTAT--CCT---TTAGGAGAGAGGCCCCCCGGGAAGCCGT-----AAAAAGCTTCTCGGGTGGCCCACCCTCCACACCC-TTGT-GTACCT-TCTA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGACCCCAGCCCC-TAAACAGGGCCAGGACGTCTGGCTAAGCGCCCGCCAGTATACAAAACTCGAACTATGATCTT-TGTG-GTTCTGAATAAATTTTTTAATAAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCGGTCAAACGGACGCGCCTGGAAGACCTCGGCGACGGCGTCTCAGCCTCGAGCGTAGTAGAATCTTTTATCTCGCTTTGGAGG-AGGGGACGGC-GCCTGCC-GGACAA-TCGACCTTCAGTCTATTTTTT--TTCTAA Phyllosticta_pyrolae_AB041242 TTACTGAACT--AGTAA----TTCTCT-----GAAAGGTCGCCGGTACCCGGTCCCCCCC-AAACAAGGGGGTCGGGGAAGGTCCTCTCACACCC-TTGT-GTACCTTACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCTC----ACCGGCCAGGACGTCAGGATAAGCGCCCGCCAGTATACAAAACTCGAGCGATTATTTCGTGTA-GTTCTGAT-AAATTATTCAATTAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCTTAGCCTCGAGCGTAGTAGTAACGT----CTCGCTTTGGAGT-GCTAGGCGTCGGCC-GCC-GGACAA-TCGACCTTTGGTCCATT--AC--TTCCAA Phyllosticta_pyrolae_AF312010 TTACTGAACT--AGTAA----TTCTCT-----GAAAGGTCGCCGGTACCCGGTCCCCCCT-AAACAAGGGGGCCGGGGAAGGTCCTCTCACACCC-TTGT-GTACCTTACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCTC----ACCGGCCAGGACGTCAGGCTAAGCGCCCGCCAGTATACAAAACTCCAGCGATTATTTCGTGCA-GTTCTGAT-AAATTATTCAATTAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCTTAGCCTCGAGCGTAGTAGTAACAT----CTCGCTTTGGAGT-GCTAGCCGTTGGCC-GCC-GGACAA-TCGACCTTTGGTCTATT--AC--TTCCAA Phyllosticta_spinarum_AF312009 TTACTGAAA--ATGTAATAAACCCT---TCAGGTTTTGGAAG----GGGGAGCCGT-----CAAAAGCTTCCCTGGT--AC-ATGCCTCAC-CCC-TTGT-ATATCT-ACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCTGCT-TGCCAGGCCAGGACGCCCGGCCAAGTGCCCGCCAGTATACAAAACTCCAGCGATTATTTTGTGTA-GTCCTGAGAA-TTTATTCAATAAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCTG--CTGTCAGACGCGCCTGGAAGACCTCGGCGACGGCATTCCAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTTTGGAGG-ATGGGGTGACGGCTTGCC-GGACAA-CCGACCTCTGGTCATTTT-----TTCCAA Phyllosticta_spinarum_AY042907 ---CTGAAA--ATGTAATAA-CCCT---C-AGGTTTTGGAAG----GGAGAGCCGT-----CAAAAGCTCTCCTGGT--AC-ATGCCTCACACCC-TTGT-GTATCT-ACCA-TGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CAGCCGGCGCCCCCAGCCTAGTCTCCTAGGCCAGGACGCCCGGCTAAGTGCCCGCCAGTATACAAAACTCCAGCGATTATTTTGTGTA-GTCCTGAGAA-TTTATTCAATAAATT-AA-------------------------------------------------------------------------------------------------CTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCTG--CTGTCAGACGCGCCTGGAAGACCTCGGCGACGGCATTCCAGCCTCGAGCGTAGTAGTAAAAT--ATCTCGCTTTGGAGG-ATGGGGTGACGGCTTGCC-GGACAA-CCGACCTCTGGTCATTTT-----TTCCAA Phyllosticta_telopeae_AY042909 ---CTGAACT--AGTAA----TTCTCT-----GAA-GGTCGCCGGTACCCGGTCCCCCCT--AAAAAGGGGGCCGGGGAAGGTCCTCTCACACCCCTTGT-GTACCTTACCACTGTTGCTTTGGCGGGCCGACCCGGTTT-CGACCCGGG-CGGCCGGCGCCCCCAGCCCCCTAGCGGGGGCCAGGACGTCTGGCTAAGTGCCCGCCAGTATACAAAACTCCAGCGATTATTTCGTGTA-GTCCTGAT-AAATTATTCAATTAATT-AA-------------------------------------------------------------------------------------------------CTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCG--CTGCCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCCTAGCCTCGAGCGTAGTAGTAAAAT--T-CTCGCTTTGGAGT-GCTGGGCGTTGGCC-GCC-GGACAA-TCGACCTTCGGTCTATTCAAT--CTCCAA Phyllosticta_vaccinii_AB095508 TTACTGAA--------TTATACCCT---CAAGGTTTTGGAAG----GGGGAGCCGT-----CAAAAGCTCCCCTGGT--AC-ATGCCCCACACCC-TTGC-GTATCT-ACCA-TGTTGCTTTGGCGG-CCGACCCGGTTT-CGACCCGGGGCGGCCGGCGCCCCCAGCC-AGCCTTCTGGGCCAGGACGCCCGGCTAAGTGCCCGCCAGTACACAAAACTCCTGCGATTATTTCGTGTA-GTCCTGAGAA-TTTATTCAATAAATT-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCTG--CTGTCAGACGCGCCTGGAAGACCTCGGCGACGGCATTCCAGCCTCGAGCGTAGTAGTAAAAC--ATCTCGCTTTGGAGG-ATGGGGTGACGGCTTGCCAGGACAAACCGACCTCTGGTCACTTTTTTTTTCACAA Rosenscheldiella_korthalsellae_PDD94884 TTATTGAAAC-ACGCAA----CTCTT-GTTGTGAAAGGTCTCTCG-AGTACGTCGGCCCC--AAGAAGCCGGCAGAAAGAGCCCTCATCACCCCTTTTGT-GTACCTTACCA-CGTTGCTTTGGCGGGCCGACCCGGTTTTCGACCCGGG-CGGCCGGCGCCCCCAGCCCCCAAC-CGGGGCCAGGACGTCCGGCTAAGTGCCCGCCAGTATACCAAACTCAAGCGATTATTTCGTGAA-GTCCTGACACTATCATTCAATTGATTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCACCGCTCAAGCTCTGCTTGGTGTTGGGCGACGTCCG--CCGCCGGATGCGCCTCGAAGACCTCGGAGACGGCGTCCCAGCCTCGAGCGTAGTAGTAAAAT--ATGTCGCTTTGGAGC-GCTAGACGACGGCC-GCC-GGACAAATCGACCTTGGGTCTATATTCT--TCCAAA ; END; [ The following blocks are output data for analysis step 6102 ] BEGIN TREES; TITLE Guignardia_TB_F6; LINK TAXA = TaxaForAnalysisStep6102; TREE Fig_6 = [&R] (((((((Guignardia_gaultheriae_AB095506:0.0,Phyllosticta_pyrolae_AF312010:0.002481):0.002018,Phyllosticta_pyrolae_AB041242:0.01299):0.023856,Guignardia_aesculi_AB095504:0.052776):0.002824,Phyllosticta_telopeae_AY042909:0.010034):0.016197,(Guignardia_philoprina_AB095507:0.005656,Guignardia_philoprina_AF312014:0.018352):0.019855):0.007262,(((Phyllosticta_beaumarisii_AY042927:0.093206,((Phyllosticta_eugeniae_AY042925:0.030136,Rosenscheldiella_korthalsellae_PDD94884:0.05639):0.007571,Guignardia_bidwellii_AB095509:0.049415):0.008552):0.015241,(Guignardia_mangiferae_AB041233:1.898E-6,Guignardia_mangiferae_AY277711:0.002503):0.064761):0.014418,(((Phyllosticta_hypoglossi_AY042923:0.018704,(Phyllosticta_spinarum_AY042907:0.004738,Phyllosticta_spinarum_AF312009:0.015149,Phyllosticta_vaccinii_AB095508:0.029909):0.004713):0.029595,(Guignardia_citricarpa_AY042917:0.0,Guignardia_citricarpa_AF374364:0.0):0.053734):0.04303,(Phyllosticta_podocarpi_AF312013:0.012462,Phyllosticta_owaniana_AF312011:0.012417):0.117734):0.027209):0.010502):0.326631,Botryosphaeria_dothidea_AY259092:0.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr9820] END;