#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 02, 2024; 7:02 GMT TreeBASE (cc) 1994-2008 Study reference: Hansen A., Gilbert L., Simpson B., Downie S., Cervi A., & Jansen R.K. 2006. Phylogenetic Relationships and Chromosome Number Evolution in Passiflora. Systematic Botany, 31(1): 138-150. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10863] [ The following blocks are input data for analysis step 6431 ] BEGIN TAXA; TITLE TaxaForAnalysisStep6431; DIMENSIONS NTAX=61; TAXLABELS Adenia_sp. Dilkea_sp. Passiflora_actinia Passiflora_acuminata Passiflora_affinis Passiflora_alata Passiflora_ampullacea Passiflora_andina Passiflora_antioquiensis Passiflora_aurantia Passiflora_auriculata Passiflora_biflora Passiflora_campanulata Passiflora_candida Passiflora_candollei Passiflora_ciliata Passiflora_cirrhiflora Passiflora_coccinea Passiflora_crenata Passiflora_cumbalensis Passiflora_deidamioides Passiflora_edulis_Inter Passiflora_garckei Passiflora_glandulosa Passiflora_guatemalensis Passiflora_herbertiana Passiflora_holosericea Passiflora_kawensis Passiflora_lancetillensis Passiflora_laurifolia Passiflora_ligularis Passiflora_magnifica Passiflora_maliformis Passiflora_manicata Passiflora_menispermifolia Passiflora_microstipula Passiflora_microstipula100 Passiflora_microstipula100a Passiflora_miersii Passiflora_multiflora Passiflora_murucuja Passiflora_nitida Passiflora_oblongata Passiflora_palmeri Passiflora_parritae Passiflora_perfoliata Passiflora_pittieri Passiflora_platyloba Passiflora_racemosa Passiflora_reflexiflora Passiflora_seemannii Passiflora_serratodigitata Passiflora_speciosa Passiflora_trialata Passiflora_trifoliata Passiflora_trisecta Passiflora_vespertilio Passiflora_villosa Passiflora_vitifolia Tetrapathea_tetrandra Tetrastylis_ovalis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M6630] TITLE 'D: cpDNA, gaps excluded, indels scored (LM2334)'; LINK TAXA = TaxaForAnalysisStep6431; DIMENSIONS NCHAR=352; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Adenia_sp. TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATAGACTAAAAAATAGGAGAAAGTAGAGATAGCAGCTGGCTATAAAGCAGATTAATCTTTAATAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTAGAAAAAGATATACGGAGAGAAGGATAGTAAAAATACTACGTTAAACCTTATGAGCTTCCCAGTTAAATTTAGATGTAAGTCTAATTAATACTACTTTTCAATTATCGATTCTAAGGGCGTCAATTTAAGGATACTGACATGTTAAAGACAATAGG--- Dilkea_sp. -------CTAGAATAATAATCCGGAAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAAGAAAAAAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAA---TACTTTTCAATTATCGATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACG--- Passiflora_actinia TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGCACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCATTTTAAGGATACCTACATGTTAAATAGAATACGCT- Passiflora_acuminata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGC-- Passiflora_affinis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATGGATAAAAAGATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAGCGTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_alata TCTAATTTTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATTTCTAAGGACATTTTCAGAAAATAACCTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATATCTACATGTTAAATACAATACG--- Passiflora_ampullacea TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTATACCTACATATATGGATAAAAAGATATACAGAGAGGGAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATATGAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_andina TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGAC-TTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTATACCTACATATATGGATAAAAAGATATACGGAGAGGGAGATAGTAAAACTAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTGAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCT- Passiflora_antioquiensis {CT}CTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTATACCTACATATATGGATAAAAAGATATACGGAGAGGGAGATAGTAAAACTAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTGAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATAC--------- Passiflora_aurantia TCTAATTCTAGGATAATAATACGGAAAGAAAGTAAAACCAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAAAAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTATATATATGGATAAAAAGATATACGGAGAGAAGGATAGTAAAAATAGTACTTTAAAAATTATGAGCTTCCCAGTTAATATATGATGTAAATATAATTAATACTACTTTTCAATTATCTATCCTAAGGAC{AT}TCACTTTAAGGATACCTACATGTTAAAGACAA-ACG--- Passiflora_auriculata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACTTATATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAAATTATGAGCTTCCCAGTTAATATATGATATTAGTATAATTAATACTACTTTT-AATTATCTATCCTAAGGACGTCACTTTAAGGATACCTACATCTTAAAGACAATACGCT- Passiflora_biflora TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATGGATAAAAAGATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACGTATGAGCTTCCCAGTTAATATTTGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACT- Passiflora_campanulata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGC-- Passiflora_candida TCTAAGTCTAGAATAATAA-ACGGAAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACGTTTCAATTATCGATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGC-- Passiflora_candollei TTTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAAAAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATAGATAAAAAGATATATGGGGAG--AGATAGTAAAAAGAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_ciliata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACCTTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAAAGAGTA{AC}AGACATAGGTGTTAAGTTATACTTATATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAAATAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACG-------- Passiflora_cirrhiflora TCTAATTCTAGAAGAATAATACGGAAAGAAAGTAAAACTAAGATGGCCCTGACAACTTAAGTAATATCTAAGGACATTTTCAGAAAATCACCTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGCATAAAAAGATATACAGAGAGAAGGATAGTAAAAATAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCGATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_coccinea TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATG----------------- Passiflora_crenata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_cumbalensis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGGAGATAGTAAACCTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTGAGTATACTTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_deidamioides TCTAATTCTAGAAGAATTATACGGAAAGAAAGTAAAACTAAGATGGCCCTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATCAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGGGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGGTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCAATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_edulis_Inter TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_garckei TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAACCTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACGAAGATAGTAAAAACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACGTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_glandulosa TCTA-TTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_guatemalensis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGCAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGGATAAAAAGATATACAGAGAGAAGGATAGTGAAAATAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACG--- Passiflora_herbertiana TCTAATTCTAGGATAATAATACGGAAAGAAAGTAAAACCAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTATATATATGGATAAAAAGATATACGGAAAGAAGGATAGTAAAAATAGTACTTTAAAAAGTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACTTTAAGGATACCTACATGTTAAAGACAATACG--- Passiflora_holosericea TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTATATATATGGATAAAAAGATATACGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTACCCTAAGGACGTCACTTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_kawensis TCTAAGTCTAGAATAATAATACGGGAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACGTTTCAATTATCGATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_lancetillensis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAAAAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGGGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_laurifolia TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATAC--------- Passiflora_ligularis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATTTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCACCTTGGTATAAACCAGATTAGTCTTTACTAAGAGAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAAGATACCTACATGTTAAATACAATACG--- Passiflora_magnifica TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCACCTTGGTATAAACCAGATTAGTCTTTACTAAGAGAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACAGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGAT-CTA-GAACGTCAATTTAAAGATACCTACATGTTAA-TACAATACG--- Passiflora_maliformis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAAGATACCTACATGTTAAATACAATACGC-- Passiflora_manicata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGGAGATAGTAAACCTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTGAGTATATTTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTT--------------- Passiflora_menispermifolia TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACGAAGATAGTAAAAACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAA-TACAATACG--- Passiflora_microstipula TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAAAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAAACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAACACTAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_microstipula100 TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAAAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAAACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAACACTAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_microstipula100a TATAATTCTACAATAATAATACGG{AT}AAGAAAGTAAAACTAAGATGGCCTTGACAACTTAAGTAATGGG{AT}AAGGACATTTTCAGAAAATAAACTAAAGAAGGGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCGGG{AT}----GATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGG{AT}TAAAAAGATATACGGAGGGAAGGATAGTAAAAATAGTACGGG----{AT}TTATGAGCTTCCCAGTTAA{AT}ATATGATGTAAGTATAATTAATACT{AT}CTTTTCAATTATCTATTCTAAGGACGTCAATTTAAGG----GG{AT}CATGTTAAAGACAATACGCTC Passiflora_miersii TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGGATAAACCAGATTAGTCTTTACGAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCT- Passiflora_multiflora TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAAAAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTATATATATGATAAAAAAGATATACGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATCTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACTTTAAGGATACCTACATGTTAAAGACAATACGC-- Passiflora_murucuja TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGAAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATGGATAAAAAGATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAAAGTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_nitida TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAAAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAAACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAACACTAGTACGTTAAAACTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACG-------- Passiflora_oblongata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATGGATAAAAAGATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACGTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_palmeri TCTAATTCTAGAGTAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAATAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTATATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAAATAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACA--- Passiflora_parritae TCTAAGTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAACCTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTATACCTACATATATGGATAAAAAGATATACGGAGAGGGAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTGAGTATAATTAAGACTACATTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACG--- Passiflora_perfoliata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATGGATAAAAAGATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACGTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_pittieri TCTAAGTCTAGAATAATAAGACGGGAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAAGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAACATCACGTTTCAATTATCGATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_platyloba TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAA-GTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAAGATACCTACATGTTAAATACAATACGC-- Passiflora_racemosa TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACAGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_reflexiflora TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAGGGAC-TTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGC-- Passiflora_seemannii TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTACTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAAGATACCTACATGTTAAATACAATACGCTC Passiflora_serratodigitata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAAGATACCTACATGTTAAATACAATACGCTC Passiflora_speciosa TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_trialata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATTTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATAAACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_trifoliata TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTGAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_trisecta TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTGAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_vespertilio TTTAGTTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTCTAAGGACATAGTCAGAAAAAAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATAGCTATATATATAGATAAAAAGATATATGGGGAGAAGGATAGTGAAAAGAGTACGTTAAAACTTATGAGCTTCCCAGTTAAAATATGATGTAAGTATAATTAATACTACTTTTCAATTATCTATCCTAAGGACGTCACCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_villosa TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCACATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACATTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_vitifolia TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTCTAAGGACATTTTCAGAAAATAAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAAGACTACTTTTCAATTATCGATTCTAAGAACGTCAATTTAAGGATACCTACATGTTAAATACAATACGCTC Tetrapathea_tetrandra -CTAACTCTAGAATAATAATACGGAAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTCTAAGGACATTTTCAGAAA-----ATAAAAAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGCTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCGATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAAGACAATACGCT- Tetrastylis_ovalis TCTAATTCTAGAATAATAATACGGAAAGAAAGTAAAACTAAGATGGCTCTGACAACTTAAGTAATCTCTAAGGACATTTTCATAAAATCAACTAAAGAATAGGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTATACCTACATATATGTATAAAAAGATATACGGAGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGGTTCCCAGTTAATATATGATGTAAGTATAATTAATACTACTTTTCAATTATCAATTCTAAGGACGTCAATTTAAGGATACCTACATGTTAAGGACAATACGCTC ; END; BEGIN CODONS; CODONPOSSET * UNTITLED (CHARACTERS = 'D: cpDNA, gaps excluded, indels scored (LM2334)') = N: 1-352; CODONPOSSET CodonPositions (CHARACTERS = 'D: cpDNA, gaps excluded, indels scored (LM2334)') = N: 1-352; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M6631] TITLE Indels; LINK TAXA = TaxaForAnalysisStep6431; DIMENSIONS NCHAR=75; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 ] [ . . . . . . . ] Adenia_sp. 00010001000?1??001100001?0001000010??00?10000000000000010000100000000000000 Dilkea_sp. 1????000001100100010000010001000000??00??10000100?0?100101???001???00000101 Passiflora_actinia 1????0010110001000100000001000000001?00?01000000010?1001000?0001???00000000 Passiflora_acuminata 1????0000110001000100000001000000001?00?010000000001100101???001???00000000 Passiflora_affinis 1????001011100100010000010001000001??00?110000?10?0?000?11???001???001?0000 Passiflora_alata 1????0010110001000100000001000000001?00?01000000010?100101???00001?00000000 Passiflora_ampullacea 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_andina 1????0010110001000100000001000000001?00?010000001????00101???001???00000000 Passiflora_antioquiensis 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_aurantia 1????001011100001?1000001000100000???1????001???0?0?0?0101???001???001?0??0 Passiflora_auriculata 1????00101110010000000001000000000???01???0001?00?0?000101???001???001?0?00 Passiflora_biflora 1????001011100000010000010001000001??00?110000?10?0?000?11???001???001?0000 Passiflora_campanulata 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_candida ?????1010111001000100000100010100001?00?110000000001100101???001???00000000 Passiflora_candollei 1????001011100000010000010001000001??00?110000?10?0?000?11???001???001?0000 Passiflora_ciliata 1????0000111001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_cirrhiflora 010??0010111001000100000100010000001?00?11000000010?100101???00000100000000 Passiflora_coccinea 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_crenata 1????0000110001000100000001000000001?00?010000000001100101???001???00000000 Passiflora_cumbalensis 1????0010110001000100000001000000001?00?010000000001100101???001???00000000 Passiflora_deidamioides 1????001011100?1??100000100010000001?00?11000000010?100101???0000010000?000 Passiflora_edulis_Inter 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_garckei 1????0010110001000100000001000000000000101000000010?100101???001???00000000 Passiflora_glandulosa 1????0010110001000100000001000000001?00?01000000010?100100110001???00000000 Passiflora_guatemalensis 1????00101110010001000001000100000001000110000?10?0?000101???001???001?0000 Passiflora_herbertiana 1????0010111001000100000100010001????0????0000?10?0?000101???001???001?0?00 Passiflora_holosericea 1????0010111001000100010??001000001??00?110000100?0?000101???001???001?0000 Passiflora_kawensis ?????1010111001000100000100010000001?00?11000000010?100101???001???00000000 Passiflora_lancetillensis 00001000011100?1??100000100010010000?000110000?10?0?000101???001???00000000 Passiflora_laurifolia 1????0000110001000100000001000000001?11?01000000010?100101???001???00000000 Passiflora_ligularis 001??001011001?000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_magnifica 001??001011001?000100000001000000001?00?01000000001??00101???001???11010000 Passiflora_maliformis 001??001011001?000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_manicata 1????0010110001000100000001000000001?00?010000000001100101???001???00000000 Passiflora_menispermifolia 1????00101100010001000000000100000000001010000000001100101???001???00000000 Passiflora_microstipula 1????0010110001000100000001000000001?00?010000000001100101???101???00000000 Passiflora_microstipula100 1????0010110001000100000001000000001?00?010000000001100101???101???00000000 Passiflora_microstipula100a 1????01?1?1100?1???101?0??0011010000?000111?????0?0?0?0101???01????00001000 Passiflora_miersii 1????0010110001000100000001000000001?00?01000000010?100100000001???00000000 Passiflora_multiflora 1????0010111001000100000?1?1?00000???00???0000?10?0?000001???001???001?0000 Passiflora_murucuja 1????001011100000010000010001000001??00?11001???0?0?0?0?11???001???001?0000 Passiflora_nitida 1????0010110001000100000001000000001?00?010000000001100101???101???00000000 Passiflora_oblongata 1????001011100000010000010001000001??00?110000?10?0?000?11???001???001?0000 Passiflora_palmeri 1????0000111001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_parritae 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_perfoliata 1????001011100000010000010001000001??00?110000?10?0?000?11???001???001?0000 Passiflora_pittieri ?????1010111000000100000100010000001?00?11000000010?100101???0001??00000000 Passiflora_platyloba 001??001011001?000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_racemosa 1????001011000?1??100000001000000001?00?01000000010?100101???001???00000000 Passiflora_reflexiflora 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_seemannii 001??001011001?000100000001000000001?00?01000000010?100001???001???00000000 Passiflora_serratodigitata 001??0010110010000100000001000000001?00?01000000010?100001???001???00000000 Passiflora_speciosa 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_trialata 1????0010110001000100000001000000001?00?01000000010?100101???000?1?00000000 Passiflora_trifoliata 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Passiflora_trisecta 1????0010110001000101000001000000001?00?01000??00?0??11001???001???00000000 Passiflora_vespertilio 1????001011100000010000010001000001??00?11010??00?0?0?0?11???001???001?0000 Passiflora_villosa 1????0010110001000100000001000000001?00?01000000010?100100001001???00000000 Passiflora_vitifolia 1????0010110001000100000001000000001?00?01000000010?100101???001???00000000 Tetrapathea_tetrandra 1????001011100?100100000100010000001?00?1?000000010?100101???001???00000010 Tetrastylis_ovalis 000010010111001000100000100010000001?00?110000000001100101???00000100000000 ; END; [ The following blocks are output data for analysis step 6431 ] BEGIN TREES; TITLE 'D: cpDNA, gaps excluded, indels scored'; LINK TAXA = TaxaForAnalysisStep6431; TREE Fig._D = [&R] (((((((((((((((((((Passiflora_alata,Passiflora_trialata),Passiflora_edulis_Inter),(Passiflora_trifoliata,Passiflora_trisecta)),(Passiflora_nitida,Passiflora_microstipula100,Passiflora_microstipula)),Passiflora_reflexiflora),Passiflora_racemosa),Passiflora_speciosa),(((Passiflora_andina,Passiflora_antioquiensis),Passiflora_ampullacea,Passiflora_parritae),(Passiflora_cumbalensis,Passiflora_manicata))),((((Passiflora_magnifica,Passiflora_ligularis),Passiflora_serratodigitata),Passiflora_platyloba),(Passiflora_seemannii,Passiflora_maliformis))),(Passiflora_laurifolia,(Passiflora_crenata,Passiflora_acuminata),(Passiflora_palmeri,Passiflora_ciliata))),Passiflora_coccinea),Passiflora_campanulata),((((Passiflora_garckei,Passiflora_menispermifolia),Passiflora_miersii),(Passiflora_glandulosa,Passiflora_actinia)),Passiflora_villosa)),Passiflora_vitifolia),((Passiflora_pittieri,Passiflora_kawensis),Passiflora_candida)),((Passiflora_microstipula100a,Passiflora_lancetillensis),(((((Passiflora_holosericea,Passiflora_auriculata),((Passiflora_perfoliata,(Passiflora_candollei,Passiflora_vespertilio),Passiflora_oblongata,Passiflora_biflora,Passiflora_murucuja),Passiflora_affinis)),Passiflora_multiflora),(Passiflora_herbertiana,Passiflora_aurantia)),Passiflora_guatemalensis))),(Dilkea_sp.,Tetrapathea_tetrandra)),((Tetrastylis_ovalis,Passiflora_deidamioides),Passiflora_cirrhiflora)),Adenia_sp.); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr21527] END;