#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 27, 2025; 4:39 GMT TreeBASE (cc) 1994-2008 Study reference: Ryberg M., Andreasen M., & Björk R.G. 2010. Weak habitat specificity in ectomycorrhizal communities associated with Salix herbacea and Salix polaris in alpine tundra. Mycorrhiza, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10400] [ The following blocks are input data for analysis step 6486 ] BEGIN TAXA; TITLE TaxaForAnalysisStep6486; DIMENSIONS NTAX=11; TAXLABELS 'Auricularia auricula-judae AF291268' 'Auricularia auricula-judae FN687611' Sebacina_dimitica_AJ966757 Sebacina_dimitica_FN687610 Uncultured_Sebacinacea_AJ893256 Uncultured_Sebacinacea_AJ893260 Uncultured_Sebacinacea_EF611157 Uncultured_Sebacinacea_EU526853 Uncultured_Sebacinales_DQ974764 Uncultured_Sebacinales_EF417824 uncultured_ectomycorrhizal_fungus_FM202813 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M6814] TITLE Sebacina; LINK TAXA = TaxaForAnalysisStep6486; DIMENSIONS NCHAR=648; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Auricularia auricula-judae AF291268' AAGATT-CT{CT}GGGGTTCGTCCCCCAAACTTCATTCAGCTGTGCGCTTCGGCTGCACGCTG-GACGAAAATCTCACACCTGTGCACCTTT----TCGGTCGCGGTTTCGGCCGCTTCCGC---TTTACATGCAACTACAAAAGTCCAGAATGTGATCTAAACGATAAAAGT--AA----CAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCT-CCTTGGTATTCCATGGAGCATGCCT-GTTTGAGTGTCAC--GTAAACCCTCA-CCCTCGCGATGTAAC---AGTCG---CCCGCGG-TGGACTTGGACCGT-GCCGT--AA-T--CGGCTCGTCTTGAAATGCATT-AGCTGGCGCTTTTAGAGTGCTGGGCG-ACGGTGTGATAA-TTATCTGCGCCAATAGCCCT----------GGGCCT-----CTTCAGCGGCGCTG--CT-TA----------CAG-CCGTCCCTCGTGGACAACTATTTTAAA--G-C---TTTGG-CCTCAAATC-AGGTA-GGACTACCCGCTGAACTTAAGCATATCAA------------ 'Auricularia auricula-judae FN687611' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCTCTTTGGTATTCCGAAGGGCATGCCCTGTTTGAGTGTCATT-GAAATCTCA-CCCCTTTGACTTTTTTGTTGA-TCG-------ATG-GGGACTTGGATG-TTGCTGTGTAACAAACGGCTCGTCT-GAAATGCCT-GAG-TGTA-CCCTGCTTTGCGGCGTATTT-GGTGTGATAAA-T--CTTCACCAGAGTTGATTTTTTCAA------GTCGC-GCTT--GTACCTGTGGGCTCTATGCTTCCAA-----CCGTCCT---G--ACAA-GACAAT-CTTTGACAA-TTTG-ACCTCAAATCGG-GT-GGGACTACCCGCTGAACTTAAGCATATCAATAACCGGAGGAA Sebacina_dimitica_AJ966757 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GTACTCTCACTCTCTCTGATCCTTT---GGATTC-A-GGG-AGTGGTGGACTTGGGTGTTTGCTGCTTCCTT-GTGGCTCACCTC-AAATGCGT-CAG-TGCACCTCTTGATTGGACA-TAGTACGGCGTGATAA-GTATCTTCGCCGGCACCTCG-----CAAGA--GGGTGGCCGATT-GGGAGCTCTGTGCT------TT-CAAA----CCGTCTTC-GG--ACAA----TTT-CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Sebacina_dimitica_FN687610 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTGA-TCATCGAATCTTTGAACGCACATTGCGCC-CTTTGGAATTCCCCGGGG-GTGC-GTGTTCTAGCGTGATTTGACCTCTCACCCTCTCTGGTCCTTT---GGATTT--GGGG-AGCGGTGGACTTGGGTGCTTGCTGCTTCCTT-GTGGCTCACCT-GAAATGCAT-CAA-TGCATCTCTTGATTGGACA-TAG-ACGGCGTGATAA-GTGTCTTCCCCGGCACCTCAT-----AAGA--GGGTGGCCGAT-CGGGAGCTCTGTGCT------TT-CAAA----CTGTCTTC-GG--ACAAC--C----CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Uncultured_Sebacinacea_AJ893256 T-GATTACGAATGGTTGCCTTCCGTGCTGGCCAGAAACT--GGCAAGTGCACGTCGGTGGCTTT-CATCCAATACCC-TGTGAACCTTTGGCCTCTTGCTAGC-TTCGGCCGGCAGAGGAACTTTACACAAACTCGAATGTAATGAAA--TCTATTGTCGTGCGCAAGCACTAATGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACC-CTTTGGCATTCCGAAGGGTATGCTC-GTTTGAGTGTCATT-GTACTCTCACACT-CCCGATCTTTC---G-ATT----GGG-AGCGGTGGACTTGGGTG-TTGCTGCTTACC--GTGGCTCACCTC-AAATGGATTC-G-TGCATCTCTTGGTTGGACA-TAGTACGGCGTGATAA-GTATCTTCGCCGGCGCCTCACTT--C--GA--GGGTGGCCGAT-CGGGAGCTCTGTGCT-------T-CAAA----CCGTCTTC-GG--ACA-C--CAA--CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Uncultured_Sebacinacea_AJ893260 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GTACTCTCACACTCTCTGATCCTTT---GGATTT--GGGG-AGCGGTGGACTTGGGTGCTTGCTGCTTCCTT-GTGGCTCACCT-GAAATGCAT-CAG-TGCATCTCTTGATTGGACA-TAGTACGGCGTGATAA-GTGTCTTCGCCGGCACCTCAT-----AAGA--GGGTGGCCGAT-CGGGAGCTCTGTGCT------TT-CAAA----CTGTCTTC-GG--ACAAC--C----CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Uncultured_Sebacinacea_EF611157 -----------------------------------TGTCGCAAATCCCACACACCTGTGCACCTATGACTCTGAGTACCG--CTTTGCATGGGCCCCTCAAAGGCCCTGGTACTCGAGTACTTTTACACACTCTGGA-TGTAATG-GAATGTCTATTGTACAATGTACAACTAA--AACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACC-CTTTGGTATTCCGAAGGGTACACCC-GTTTGAGTGTCATT-GTAATCTCA-CCCCTTTGACTTTTTTGTTGA-TC-----G--GTG-TGGACTTGGATG-TTGCTGTGTAACAAACGGCTCGTCT-GAAATGCCT-GAG-TGTA-CCCTGCTTTGCGGCGTATTT-GGTGTGATAAA-T--CTTCACCAGAGTTGACTTTTTCAA------GTCGC-GCTT--GTACCTGTGGGCTCTATGCTTCCAA-----CCGTCCT---G--ACAA-GACAAT-CTTTGACAA-TTTG-ACCTCAAATCGG-GT-GGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Uncultured_Sebacinacea_EU526853 TTGATTGCGAATCGTTGCCTTCTGTGCTGGCCAGCTC---TGGCAAGTGCACGTCGGTGACTTT-CATCCAATACCC-TGTGAACCTTTGGCCTCTGC-TAGC-TTCGGCCGGCAGGGGAA-TTTACACACACTCGAATGTAATGAAA--TTTATTGTCGTGCGCAAGCACTAATGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACC-CTTTGGCATTCCGAAGGGTATGCTC-GTTTGAGTGTCATT-GTACTCTCACACTCCC--AGTCTTT---GGATT----GGG-AGG--TGGACTTGGGTG-TTGCTGCTTTACC-GTGGCTCACCTC-AAATGGATTC-G-TGCAACTCTTGGTTGGACA-TAGTACGGCGTGATAA-GTGT-TTCGCCGGCACCTCACT-----AGA--GGGTGGCTGAT-CGGGAGCTCTGTGCT-------T-CAAA----CCGTCTTC-GG--ACAATGA-----CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACCACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Uncultured_Sebacinales_DQ974764 TTGATTGCGAATCGTTGCCTTCTGTGCTGGCCAG?????--GGCAAGTGCACGTCGGTGACTTT-CATCCAATACCC-TGTGAACCTTTGGCCTCTGC-TAGC-TTCGGCCGGCAGGGGAA-TTTACACACACTCGAATGTAATGAAA--TTTATTGTCGTGCGCAAGCACTAATGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAA?TGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACC-CTTTGGCATTCCGAAGGGTATGCTC-GTTTGAGTGTCATT-GTACTCTCACACT--CCCAGTCTTT---GGATT----GGG-AGG--TGGACTTGGGTG-TTGCTGCTTTACC-GTGGCTCACCTC-AAATGGATTC-G-TGCAACTCTTGGTTGGACA-TAGTACGGCGTGATAA-GTGT-TTCGCCGGCACCTCACT-----AGA--GGGTGGCTGAT-CGGGAGCTCTGTGCT-------T-CAAA----CCGTCTTC-GG--ACAATGA-----CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACCACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA Uncultured_Sebacinales_EF417824 TTGATTGCGAATCGTTGTCTCCAGTGCTGGCCAGTCCTTCTGGCAAGTGCACGTTGGCGGCTTTTCATCCAATACCCCTGTGAACCTTTGGCCTCTTGCTAGCCTT-GGCCGGCAGAGGAATTTTACACCCACTCGAATGTAATGAAA--T-TATTGTTGTGCGTAAGCACTAATGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACC-CTTTGGCATTCCGAAGGGTATGCTC-GTTTGAGTGTCATT-GTACTCTCACACT-TCTGATCCTTT---GGATT----GGG-AGCGGTGGACTTGGGTG-TTGCTGCTTTGCG-GTGGCTCGCCTC-AAATGCATT-AG-TGCAACTCTTGGTTGGACA-TAGTACGGCGTGATAA-GTGTCTTCGCCGGCACCTCGC-----AAGA--GGGTGGCTGAT-CAGGAGCTCTGTGCC-------TCCAA-CGGTCTGTCTTCA-G--ACAA---CAA--CTT-GACAAC-TTG-ACCTCAAATCGA-GTA-GGACCACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA uncultured_ectomycorrhizal_fungus_FM202813 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACC-CTTTGGCATTCCGAAGGGTATGCTC-GTTTGAGTGTCATT-GTACTCTCACACT-TCTGATCTTTT---GGATT----GGG-AGCGGTGGACTTGGGTG-TTGCTGCTTTGCG-GTGGCTCGCCTC-AAATGCATT-AG-TGCAACTCTTGGTTAGACA-TAGTACGGCGTGATAA-GTATCTTCGCCGGCACCTCGC-----AAGA--GGGTGGCTGAT-CAGGAGCTCTGTGCT-------TCCAA-CAGTCTGTGTTCA-G--ACAA---CAA--CT--GACAAC-TTG-ACCTCAAATCGA-GTA-GGACCACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA ; END; [ The following blocks are output data for analysis step 6486 ] BEGIN TREES; TITLE Sebacina_TB; LINK TAXA = TaxaForAnalysisStep6486; TREE Imported_tree_0 = [&R] (('Auricularia auricula-judae FN687611':0.03556995558853939,Uncultured_Sebacinacea_EF611157:0.011440706600673287)89:0.44262788717216073,((uncultured_ectomycorrhizal_fungus_FM202813:0.02292599034622626,Uncultured_Sebacinales_EF417824:0.0112175418852998)84:0.013925143083146081,((Uncultured_Sebacinacea_AJ893256:0.025161245798918652,((Sebacina_dimitica_FN687610:0.05883728643997817,Uncultured_Sebacinacea_AJ893260:2.01601772686662E-6)60:0.024099183347999233,Sebacina_dimitica_AJ966757:0.050750777337740326)61:0.0900239720604931)39:0.026244803454082588,(Uncultured_Sebacinacea_EU526853:2.01601772686662E-6,Uncultured_Sebacinales_DQ974764:2.01601772686662E-6)99:0.03421117104264226)20:0.03214236928507788)87:0.3534735483690016,'Auricularia auricula-judae AF291268':0.9886902398711774); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr25311] END;