#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 08, 2024; 18:26 GMT

TreeBASE (cc) 1994-2008

Study reference:
Manos P., Nixon K., & Doyle J. 1993. Cladistic analysis of restriction site variation
within the chloroplast DNA inverted repeat region of selected Hamamelididae.
Systematic Botany, 18: 551-562.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S128]

[ The following blocks are input data for analysis step 70 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep70;
        DIMENSIONS NTAX=32;
        TAXLABELS
            Alnus
            Annona
            Betula
            Callicoma
            Castanea
            Casuarina
            Cercidiphyllum
            Chrysobalanus
            Colombobalanus
            Connarus
            Corylopsis
            Corylus
            Cunonia
            Disanthus
            Erythrina
            Euptelea
            Fagus
            Fothergilla
            Hamamelis
            Juglans
            Leitneria
            Liquidambar
            Malus
            Myrica
            Nothofagus
            Ostrya
            Philadelphus
            Platanus
            Serjania
            Staphylea
            Trigonobalanus
            Trochodendron
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2119]

	TITLE Appendix_1;
	LINK TAXA = TaxaForAnalysisStep70;
	DIMENSIONS NCHAR=45;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;

MATRIX
[                          10        20        30        40     ]
[                           .         .         .         .     ]
Alnus              000001010010011100001000011101000001010011000
Annona             100000001111011101000010111000001011001001000
Betula             000001010010011100001000011101000001010011000
Callicoma          100000010101011100001011111110011001110011001
Castanea           001000010000010000000010011101000000110011000
Casuarina          100001010010001100001000011101000001010011000
Cercidiphyllum     100010010111011100111111111110111000110101001
Chrysobalanus      100100100111010100001111111110111001110011001
Colombobalanus     001000010010010000000010011101000000110011000
Connarus           100100010100011100001011??????011101110011001
Corylopsis         100010010111011100011111111110111000110101101
Corylus            000001010010011100001000001101000001010011000
Cunonia            100000010101001100001111111110001001110011001
Disanthus          100010010111011100011111111110111000110101001
Erythrina          100100000110010010001111111011000001110011000
Euptelea           000110011111111101010111110000110011011011001
Fagus              000000010010011000000010011101000000110011000
Fothergilla        100010010111011100011111111110111000110101001
Hamamelis          100010010111011100011111111110111000110101001
Juglans            000001010010011100001000011101000001010011000
Leitneria          110110010011010100111111111110111001010011011
Liquidambar        100010010011110100011011111110111100110101001
Malus              110100000010011100001011011110001001010011001
Myrica             000001010010011100001000011101000001010011000
Nothofagus         100100010110011100001000011110010001110011001
Ostrya             000001010010011100001000001101000001010011000
Philadelphus       100000110011011100011011111000110001110110000
Platanus           100110011111010101010111110000111011101111101
Serjania           100000010111010010001011111110011001110011011
Staphylea          100100010011001100110011110110011011110010001
Trigonobalanus     101000010010010000000010011101000000110011000
Trochodendron      101010011111011100010111110110111011111111001
;
END;

[ The following blocks are output data for analysis step 70 ]
BEGIN TREES;
      TITLE Tb4849;
      LINK TAXA = TaxaForAnalysisStep70;
      TREE Fig._1 = [&R] (Annona,(Euptelea,(Platanus,(Trochodendron,((Cercidiphyllum,Hamamelis,Fothergilla,Corylopsis,Liquidambar,Disanthus),(Leitneria,(Chrysobalanus,((Erythrina,Serjania),((Connarus,(Callicoma,Cunonia)),((Philadelphus,Staphylea),(Malus,(Nothofagus,((Fagus,(Castanea,Trigonobalanus,Colombobalanus)),(Casuarina,Juglans,Myrica,Betula,Alnus,(Corylus,Ostrya)))))))))))))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1556]


END;