#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 12, 2025; 11:13 GMT TreeBASE (cc) 1994-2008 Study reference: Tsutsumi C., Matsumoto S., Yatabe Y., Hirayama Y., & Kato M. 2011. A New Allotetraploid Species of Osmunda (Osmundaceae). Systematic Botany, 36: 836--844. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11582] [ The following blocks are input data for analysis step 7441 ] BEGIN TAXA; TITLE TaxaForAnalysisStep7441; DIMENSIONS NTAX=23; TAXLABELS Osmunda_claytoniana Osmunda_hybrida_H519A Osmunda_hybrida_H519B Osmunda_hybrida_H519C Osmunda_hybrida_H519D Osmunda_hybrida_H519E Osmunda_japonica_J1 Osmunda_japonica_J2 Osmunda_japonica_J3_J4 Osmunda_japonica_J5_J6_J7_J8 Osmunda_lancea_L1 Osmunda_lancea_L2 Osmunda_lancea_L3 Osmunda_regalis_R1_R2_R3 Osmunda_regalis_R10 Osmunda_regalis_R11_R12 Osmunda_regalis_R13 Osmunda_regalis_R14 Osmunda_regalis_R15 Osmunda_regalis_R16 Osmunda_regalis_R17_R18 Osmunda_regalis_R4 Osmunda_regalis_R5_R6_R7_R8_R9 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M9061] TITLE Osmunda_L519; LINK TAXA = TaxaForAnalysisStep7441; DIMENSIONS NCHAR=705; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Osmunda_claytoniana AACAGGTCTCCTCCCCCTCCTCCTCCTCCTCTTCCTCCTCCTCTTTTGGGCTTTCCAGCTTTCTTTGCTATGTATCCTCTTTTGGGTTTTTCAGCTTTCTTTGCTATGTATCCTCTGTCTCTTTGTCGGTCAGATCTGGTAGCAAGAGCTGTCTAATGAGATCGAGGCTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGATCGTTCTAACAGGCCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCCGCGTTTGTTGATAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCT------------ATGCAGCAGGCA-TTTTTTCTGTCTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTATGCAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACCAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTGTGGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTCTGCT-GTGCGAAGTTCAGAGATGGACGTCTGATGAAGC Osmunda_hybrida_H519A AACAGGTCTCCTCCTCCT---------------------CCCCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGCATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCTCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACATGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCC--------CCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_hybrida_H519B AACAGGTCTCCTCCTCCT---------------------CCCCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGATAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCTCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCCTTGCGTTGAAAGCACCTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_hybrida_H519C AACAGGTCTCCTCCTC-TCCTCCTCCTCCT---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCTTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_hybrida_H519D AACAGGTCTCCTCCTC-TCCTCCTCCTCCT---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_hybrida_H519E AACAGGTCTCCTCCTCCT---------------------CCCCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCTCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACCTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_japonica_J1 AACAGGTCTCCTCCTCCT---------------------CCTGTTTTGGGTTTTTCAGTTTTCTTTGCTGTGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTCCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_japonica_J2 AACAGGTCTCCTCCTCCT---------------------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTGTGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGCCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGT{AG}GAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTCCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_japonica_J3_J4 AACAGGTCTCCTCCTC-TCCTCCTCCTCCT------CCTCCTGTTTTGGGTTTTTCAGTTTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTCCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_japonica_J5_J6_J7_J8 AACAGGTCTCCTCCTCCT---------------------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTGTGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGCCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTGGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTCCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_lancea_L1 AACAGGTCTCCTCCTC-TCCTCCTCCTCCT------???CCTGT{CT}TTGGGTTTTTCAG{CT}TTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTG{CT}TGAAAGCGT{AG}GAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA?TTTTTTCTGTTTCTGC{AG}GTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTC{AG}GCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGAC{CT}TCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_lancea_L2 AACAGGTCTCCTCCTC-TCCTCCTCCTCCT---------CCTGTCTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGCTGAAAGCGTAGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCGGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_lancea_L3 AACAGGTCTCCTCCTC-TCCTCCTCCTCCT---------CCTGTCTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGGGACTCGTTAATTAGTTTGATCACACGCATCGCAATCGTGAATCGTGAAGCTCGCCAGACCGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTAGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCACTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTCGCGGATCTAACCTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAACTGCTCGGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGGGTAAGT Osmunda_regalis_R1_R2_R3 AACAGGTCTCCTCCTC------------------------CTCTTTTGGGGTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATAGTCTTGGTCTCAATCGTGAGTATCTCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACCTGTAA-CAATCGCAGAGTTTGCGGATCTCACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCTTGTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_regalis_R10 AACAGGTCTCCTCCTCCT---------------------CCTCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACAGGCATCGCAATCGTGAA-------GCTCGCCAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCTCGGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACCTATAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_regalis_R11_R12 AACAGGTCTCCTCCTCCT---------------------CCTCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCGGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTACGTTGAAAGCACCTATAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_regalis_R13 AACAGGTCTCCTCCTCCTCCTCCTCCTCCT---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATC?TCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTCTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAATTGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACAGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGT{CT}GCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCT------------ACGCAGC{AT}AGCA-TTTTT{CT}CTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACT{AG}AAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGTAGAAGT Osmunda_regalis_R14 AACAGGTCTCCTCCTCCTCCTCCTCCTCTT---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGCGTCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTTTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGCCTCGTT----AGTTTGATCA{CT}ACGCATCGCAATCGTGAA-------GCTCGCCAGACAGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGT{CT}GCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGTAGAAGT Osmunda_regalis_R15 AACAGGTCTCCTCCTCCTCCTCCTCCTCTT---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGCGTCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTTTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGCCTCGTT----AGTTTGATCATACGCATCGCAATCGTGAA-------GCTCGCCAGACAGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTTGCAGAGCTGCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGTAGAAGT Osmunda_regalis_R16 AACAGGTCTCCTCCTCCTCCTCCTCCTC{CT}T---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGC{AG}TCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCT{CT}TGTCGGTCAGATCTGGTAGGAAGAGCTGCCAA{AT}TGAGATCGAG{AC}CTCGTT----AGTTTGA{CT}CACACGCATCGCAATCGTGAA-------GCTCGCCAGACAGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCT------------ACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGTAGAAGT Osmunda_regalis_R17_R18 AACAGGTCTCCTCCTCCTCCTCCTCCTCCT---------CCTGTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGTTTTTCA---------GCTATGTATACTCCGTCTCTCTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAATTGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACAGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCT------------ACGCAGCTAGCA-TTTTTCCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACTTGTAA-CAATCGCAGAGTTTGCGGATCTAACTTGGTACGAGTTCAAGGGAGCGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCTCTTCTGGTCAGCGATTCAGCTTTGCCCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCAGAGATGGACGACTGTAGAAGT Osmunda_regalis_R4 AACAGGTCTCCTCCTCCT---------------------CCTCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCCAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATAGTCTTGGTCTCAATCGTGAGTATCTCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACCTGTAA-CAATCGCAGAGTTTGCGGATCTCACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCTTGTGCGAAGTTCATAGATGGACGACTGGAGAAGT Osmunda_regalis_R5_R6_R7_R8_R9 AACAGGTCTCCTCCTCCT---------------------CCTCTTTTGGGTTTTTCAGCTTTCTTTGCTATGCATCCTCTTTTGGGGTTTTCA---------GCTATGTATACTCCGTCTCTGTGTCGGTCAGATCTGGTAGGAAGAGCTGCCAAATGAGATCGAGACTCGTT----AGTTTGATCACACGCATCGCAATCGTGAA-------GCTCGCGAGACGGCTCTAACAGGTCTTGTTCCTCAGGTATCGGAAGCAGTACAGCACCGTCGCAGAGCTTCACCATCGATTTTCTGCGTTTGTTGAAAGCGTGGAGCTCATTGAATCCACCAACCGCAAGAAGCTTACCTATACTCTTGGTCTCAATCGTGAGTATCGCTGTTTCTCAATTTCACCCTCCGCTTCACCCTACGCAGCAAGCA-TTTTTTCTGTTTCTGCGGTTGTTTCTTTGCGTTGAAAGCACCTATAA-CAATCGCAGAGTTTGCGGATCTAACTTGGGACGAGTTCAAGGGAACGTACTTGAGATCTTCCCAGCAGAATTGCTCAGCGACTAAAGGCACCCACAAACTCAGAAACATGGCTGTTCCGACCCAGGTTGGACCTCTTTCCTCGCCTCCCCTTGTTGTCAGCGATTCAGCTTTGCTCGCTTTGATCTGCGATTGTGCT-GTGCGAAGTTCATAGATGGACGACTGGAGAAGT ; END; [ The following blocks are output data for analysis step 7441 ] BEGIN TREES; TITLE Osmunda_L519; LINK TAXA = TaxaForAnalysisStep7441; TREE PAUP_1 = [&R] (Osmunda_claytoniana:0.022629,(((Osmunda_regalis_R10:0.003062,Osmunda_regalis_R5_R6_R7_R8_R9:0.001521,Osmunda_regalis_R11_R12:0.003041):0.0015,((Osmunda_regalis_R1_R2_R3:0.001525,Osmunda_regalis_R4:0.0):0.003074,(Osmunda_hybrida_H519A:0.003092,Osmunda_hybrida_H519B:0.003038,Osmunda_hybrida_H519E:0.0):0.001509):0.001554):0.009825,(((Osmunda_regalis_R13:0.0,Osmunda_regalis_R17_R18:0.002793):0.003956,(Osmunda_regalis_R16:0.0,Osmunda_regalis_R14:0.007983,Osmunda_regalis_R15:0.010167):0.0):0.003864,(Osmunda_hybrida_H519C:0.001497,Osmunda_hybrida_H519D:0.0,Osmunda_lancea_L1:0.0,(Osmunda_lancea_L2:0.001496,Osmunda_lancea_L3:0.0):0.004515,(Osmunda_japonica_J3_J4:0.0,(Osmunda_japonica_J1:0.0,(Osmunda_japonica_J2:0.0,Osmunda_japonica_J5_J6_J7_J8:0.001529):0.003055):0.001524):0.002988):0.011936):0.006412):0.022629); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr46293] END;