#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 09, 2025; 22:38 GMT TreeBASE (cc) 1994-2008 Study reference: Portik D.M., & Papenfuss T. 2011. Monitors cross the Red Sea: The biogeographic history of Varanus yemenensis. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11910] [ The following blocks are input data for analysis step 7894 ] BEGIN TAXA; TITLE TaxaForAnalysisStep7894; DIMENSIONS NTAX=19; TAXLABELS Agkistrodon_strauchii Cylindrophis_ruffus Dinodon_rufozonatum Elgaria_panaminta Heloderma_suspectum Lanthanotus_borneensis Ramphotyphlops_braminus Shinisaurus_crocodilurus Varanus_albigularis_albigularis_AMB8890 Varanus_albigularis_microstictus_MVZ241418 Varanus_bengalensis_MVZ237483 Varanus_exanthematicus_MVZ238935 Varanus_griseus_MVZ236611 Varanus_niloticus_MVZ238936 Varanus_ornatus_CAS207622 Varanus_salvator_CAS212911 Varanus_sp_CAS238226 Varanus_yemenensis_MVZ236610 Xenosaurus_grandis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M10252] TITLE BEAST_Dating_Analysis_Alignment; LINK TAXA = TaxaForAnalysisStep7894; DIMENSIONS NCHAR=831; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Agkistrodon_strauchii TG---GACATCACTGATGAACAACCTAAGGCAGCAGCTATAATGTCACAA---GTGCTCTTTGAAGCAGACACCGAGCTGAATAAAAAT---AGCTTGGCAGGAGAGAAAGAGGTGTTTCACATGAGCCAAAGGGAGACAGAAGCTCACCAAGCAAAGCTGCAGCACCTC???TGTCGCATCTGTGGAGCCTCACTGAAAACTGACCCTTACAAAAAGTGTCATCCAGTTCATGGGCCAGTGGATGAGGAGACCCAGGCTCTTTTGAGAAAGAAAGAGAAAAGAGCCACTTCCTGGCCAGATCTTCTTGCCAAAGTTTTTAAGATTGATGTAAGGGGAGATATTGACACAACCCATCCTACTCATTTTTGTCACAATTGTTGGAAAGTGATTCAGAGAAAAGTCAGCAATGCCCCCCATGAAGCACATCTTCTAGAGAAAGACCCAGTGGAGTGGCATCCCCATTCAACAAGCTGTGACGTTTGTGTCACTTCCTTTCGTGGAGTCAAGAGAAAGAAACCAATGTTGAATTCACAGCTGAGCAAAAAACTCAGGATTATTGCTGGACGTACTAGAAAAATAAGATGCGTAAGAAAGGTAAAGCAACTAAATAACAAAAGTTTAATGAAAAAGATTTCCAACTGTAAGCAGATCCACCTCAGTACAAAAATCCTTGCAATAGACTACCCTGTGGACTTTGTAAAGTCAATATCTTGCCAGATCTGTGAGCACATCCTGGCTGATCCAGTAGAAACAACATGTAAACACTTATTCTGTAGAGTCTGCATTCTTAAATGTCTTAAAGTAATGGG{AC}AGCTATTGCCCATCCTGCC Cylindrophis_ruffus TG---GACATCACTGATGAACAGCCTAATGCAGCAGCTGTAATGTCACAA---GTGCCATTTGAAACAGATACTGAATTTAATAAAGAT---AGCTTAGCAATAGATAAAGATGGTTTTCACGTGAGCCAAAGAGAGATGGAAACTCACCAAGCAAACCTGCAGCACCTC???TGTCGCATCTGTGGAGGCTCACTGAAAACTAACCTTTACAAAAGATGTCATCCAGTTCATGGGCCAGTGGATGAGGAGACCCAAGCTCTTTTGAGAAAGAAAGAGAAAAGGGCCACTTCCTGGCCAGATCTTATTGCCAAAGTTTTTAAGATTGATGTCAAGGGAGATATTGACACGATCCATCCTACTAATTTTTGCCACAATTGTTGGAATGTGATTCAAAGAAAAGTCAGCAATGCCCCACATGAAGCACTTCTTCAAGGGAAAGACACAGTGGAATGGCATCCCCATTCATCAAGCTGTGATGTTTGTGGCATTTCCTTTTGTGGCATCAAGAGAAAGAAGCCAACCCTGAATTCACAGCTGAGCAAAAAGCTCAGAATTGTTCCTGGATGTACTAGAAAAATAAGATGTGTAAGGAA{AG}GTAAAGCAAATGAATAACAAAAGTTTAATGAAAAAGATTTCAAACTGTAAGCAGATCCATCTCAGTACAAAGGTCCTTGCAATAGACTATCCTGTGGACTTTGTAAAGTCAATATCTTGCCAGATCTGTGAGCACATTCTGGCTGATCCAGTAGAAACAACGTGTAAACACTTATTCTGTAGAGTCTGCATTCTTAAATGTCTTAAAGTAATGGGCAGCTATTGCCCATCCTGCC Dinodon_rufozonatum TG---GACATCACTGACGAACAACCTAAGG{CT}AGCAGCTGTAATGTCACAA---GTGCCCTTTGAAACAGACCCTGAGTTGAATAAAAAT---AGCTTGGCAAGAGAGAAAGATGTCTTTCACATGAGCCAAAGGGAGATGGAAGCTCACCAAGCAAACCTGCAGCACCTC???TGTCGCATCTGTGGAGGCTCACTGAAAGCTGAACCATACAAAAAGTGTCATCCAGTTCATGGGCCAGTGGATGAGGAGACCCAGGCTCTTTTGAGAAAGAAAGAGAAAAGAGCCACTTCCTGGCCAGATCTTCTTGTCAAAGTTTTTAAGATCGATGTAAGGGGAGATATTGACACCATCCACCCTACTCACTTTTG{CT}CACAATTGTTGGAAAGTCATTCAAAGGAAAGTCAGCAATGCCCCCCATGAAGCACATCTTCTAGAGAAAGACCCAGTGGAATGGCAGCCCCATTCAACAAGCTGTGACATTTGTGTCACTTCCTTTCGTGGAGTCAAGAGGAAAAAACCAATGCTGAATTCACAGCTGAGCAAAAAACTCAGGATTATTGCTGGGCATACGAGAAAAATAAGATGCATCAGAAAGGTAAAGCAACTGAATAACAAAAGTTTGATGAAAAAGATTTCAAACTGTAAACAAATCCATCTCAGCACAAAAATCCTTGCGATAGACTACCCTGTGGACTTTGTAAAGTCAATATCTTGCCAGATCTGTGAACACATCCTGGCTGATCCAGTAGAAACAACATGCAAACACTTATTTTGCAGAGTCTGCATTCTTAAATGCCTTAAAGTAATGGGAAGCTATTGCCCATCCTGCC Elgaria_panaminta TGGACAAAGTCGCCGAGCAACAGCCTGATGCGGTGGCTTTCATGTCACAACAAGCACCCTTTGAAACAGGCTTTGACTTGAACAAAAGT---ATGCAGGAAATAAATAAGGATGCCTTTCATACAAACTACAGAGAGGCTGAAACCCATCAAGCCAACCTACAGCACCTC---TGCCGCATTTGCGGTGGCTCGTTTAAAACTGACCCTTACAAGAGAAGCCACCCTGTTCATGGGCCAGTGGATGATGAGACCCAAGCTCTTCTGAGAAAGAAAGAGAAACGGGCCACGTCATGGCCAGATCTTCTTGCCAAAGTGTTTAAGATCGACGTGAGAGGAGACATTGACACAATCCATCCTACTCATTTTTGCCACAATTGCTGGACTGTGGTTCAAAGGAAATTCAGCAATTCCCCTTGTGAAGTATATTTTCCAAGGAATGGCACGATGGAGTGGCGTCCCCATTCGTCAAGCTGTGATGTTTGCAACACTTCCTTCCGTGGGGTCAAGAGAAAGAAGCAAGCCCCGAATCCACAGTTGAACAAAAAGCTCAGGATCGTTGTGGGACGTGCTAGAAAAATAAGGCGTGTGAGGAATATGAGGCAAGTGAACCACAAGGGTTTAATGAAAAAGATTGCCAACTGCAAGAAGATCCATCTCAGTACCAAGATCCTTGCAGTAGACTATCCTGCGGACTTTGTAAAGTCAATCTCTTGCCAGGTCTGTGAGCACATCCTGTCTGACCCAGTTGAAACAACATGCAAGCACTTATTCTGCAGAGTCTGCATCCTTAAATGCCTCAAAGTCATGGGGAGCTATTGCCCATCCTGTC Heloderma_suspectum TGGACAAAGTCAACGAGCAACAGGCTGATGTGGCGGCTTTAATGTCACCTCAGGCACCCTTTGAAACAGACACCGAATTGAACACAAAT---ACACAGGCAATAAATAAGGGTGTCTTTCATATGAACTATAGAGAGACTGAAGCTCATCAAGCAAACTTACAGCATCTT---TGCCGCATCTGCGGTGGCTCATTTAAAACTGACCCTTACAAGAGAAGCCACCCTGTTCATGGGCCTGTGGATGATGAGACACAGGCTCTTCTGAGAAAGAAAGAGAGGAGGGCCACGTCCTGGCCAGATCTTCTTGCCAAAGTGTTTAAGATTGATGTGAGAGGAGACATGGACACAATCCATCCTACTCATTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAATTCAGCAGTTCCCCATATGGAGTGTCTTTCCCAAGGAACAGCACGATGGAGTGGCGTCCCCATTCGTCAAGCTGTGACATCTGCGGCAGTTCCTTCCGTGGGGTCAAGAGGAAGAAGCAATCCCTGGATCCACAGCTGAGCAAAAAGCTCCGAGTCATTGCGGGGCGTGCCAGAAAAATAAGGCATGTGAGAAATATGAGACAAGTGAACCACAAGAGTTTAATGAAAAAGATTGCCAACTGCAAGAAGATCCATCTCAGTACCAAGATGCTTGCAGTAGACTATCCTGCAGACTTTGTAAAGTCCATCTCTTGCCAGGTCTGTGAGCACATCCTGTCTGACCCCGTCGAAACGACATGCAAGCACTTGTTCTGCAGAGTCTGCATCCTTAAATGCCTCAAGGTCATGGGGAGCTATTGCCCATCCTGTC Lanthanotus_borneensis TGGACAGAGTCGGTGAGGAACAGGTTGATGCAGCAGCTTTCATTTCACAACAAGTACCCTTTGAAGCAGACACAGAACTGAACAAAAGTATTTTGCCGGCAATAAATAAAGACATCTTTCACAGGAGCTATAAAGAGACGGAAGCTCATCAAGCAAACCTGCAGCACCTC???TGCCGCATCTGTGGTGGTTCGTTTAAAACTGACCCTTGCAAAAGAAGCCACCCTGTTCATGGGCCGGTGGATGATGAGATGCAGGCCCTTCTGAGAAAGAGAGAGAGGAGGGCCACGTCGTGGCCAGAACTTCTCGCCAAAGTGTTTAAGATTGACGTGAGAGGAGACATCGACACAATCCACCCCACTCACTTTTGCCACAATTGCTGGAATGTGGTTCAAAGGAAATTCAGCAATTCCCCATGTGAAGTGTATTTTCCAAGGAATGGCACAATGGAGTGGCATCCACATTCATCGAGCTGTGATGTCTGCAGCACTTCCTTTCATGGGGTCAAGAGAAAAAAGCCAGCCCTGAATCCACAGTTGAGCAAAAAGCTCAAGAACCTTGCAGGGCATGCTAGAAAAATAAGGCGTGTGAAAAATATAAAACCAGTGAACCAC---CCTTTAATGAAGAAGATTGCCAACTGCAGCAGGATCCACCTCAGTACCAAGAACCTTGCAGTAGACTATCCTACAGACTTTGTAAAGTCAATCTCTTGCCACGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACGACATGCAAACACTTATTCTGCAGGGTCTGCATTCTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Ramphotyphlops_braminus ??------GTCAGCAATGAACAGCCTGATGTTGCTACTGTAATGTCACAA---GTGCCCTTTGATACCAGTACTGAAATGAATACAAAG---AGGCCTACAATGGATGAAGATGCCTTTCGCATAAACCAAAGAGAGACTGAAGTTCATCAAGCACACTTGCAGCACCTC???TGCCGCATCTGTGGAGGCTTGTTAAACCTGGACCCTTACAAAAGGGTCCATCCAGTACATGGACCAGTAGATGAGAAGATCCAGGCTCTTTTAAGAAAGAAAGAGAAAAGAGTCACTTCCTGGCCAGACCTTCTGGCCAAAGTTTTTAAGATTGATGTGAGAAGAGATATTGACACAATCCATCCGATTTATTTTTGTCACCCCTGTTGGAATGTGATTCAACGTAAAATTAGCAATGCCCCACACAAAGTGCCCCTTCCAGGAAGAGACGCCGTAGAGTGGCATCCCCATTCGTCAATCTGTGATGTTTGTGGCACTTCTTCTCATGGGGTCAAGAGAAAGAAGCTAACCCTGAATACACAGCTGAGCAAAAAGCTCAGGATTGTTCCTGGATCTAGTAGGACAGTAAGATGTGTAAGAAAGTTAAAGCAAGTAAGCCACAGACGCTTGATGAAAAAGATTTCAAACTGCCAGCAGATCCACATCAGTACAAAGATCCTTGCAACCGACTACCCCGTCGACTTTGTAAAGTCAATCTCTTGCCAGGTCTGTGAGCATATTTTGACGGACCCAGTAGAAGCAACATGCAAACACTTATTCTGCAGAGTCTGCATCCTTAAATGTCTCAAAGTAATGGGCAGTTACTGTCCATCCTGCC Shinisaurus_crocodilurus TGGACAAAGTCACCGAGGAATGGGCTGATGCAGCCGCTTTAAAGTCACAACAAGTGTCCTTTGAAACAGACACTGAATTGAACAAAAGT---ATGCAGGCAATAAATAAAAATGTCTTTCACATGAATTACAGAGAGACTGAAGCTCATCAGGCAAACCTACAGCACCTC---TGCCGCATCTGCGGTGGCTCATTTAAAACTGACCCTTACAAGAGAAGCCACCCTGTTCATGGGCCAGTGGATGATAAGACACAGGCTCTTCTGAGAAAGAAAGAGAGAAGGGCCACATCCTGGCCAGATCTTCTTGCCAAGGTTTTTAAGATTGATGTGAGAGGAGACATTGACACAATCCACCCTACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCCATGTGAAGTGTATCTTCCAAGGAATGGCACAATGGAGTGGCATCCCCATTCATCCAGCTGTGATGTTTGTGGCACTTCCTTCCGTGGGGTCAAGAGAAAGAAGCAAGCCCTGAATCCACAGTTGAGCAAAAAGCTGAGGATCGTTGCGGGACATGCTAGAAAAATAAGGTGTGTGAGGAATATGAAACAAGTGAACAACAAGACTTTAATGAAAAAGATTGCCAGCTGCAAGAAGATCCATCTCAGTACCAAGATCCTTGCAATAGACTATCCTGCAGACTTTGTAAAGTCAATCTCTTGCCAGGTCTGTGAGCACATCCTGTCTGACCCAGTAGAAACGACGTGCAAACACTTATTCTGCAGGATCTGCATCCTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_albigularis_albigularis_AMB8890 ?????????????????????????????????????????????????????????????????????????????????????????---??????????????????????????????????????????????????????????????????????????CCTC---TGCCGCATTTGTGGTGCTTCATTTAAAACTGACCCTTGCAAGAGAAGTCACCCCGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGAGAAGGGCCACGTCGTGGCCAGAACTTCTCGCCAAGGTGTTTAAGATTGACGTGAGAGGAGACATCGACACAATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCTGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGAGGTTTGCAGCACTTCTGTCCATGGGGTCAAGAGGAAGAAGCAAGGCCTGAATCTGCAGTTGAGCAAAAAGCTCATGAGCACGACAGGGCATGCTAGAAAAATAAGGCGCATGAGAACTATGAAACCAGTGAACATCAAGAGTTTAATGAAGAAGATTGCCGACTGCAGCAAGATCCACCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACAGCATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_albigularis_microstictus_MVZ241418 TGGTCAGAGTTACCGAGCAACAGGTTGATTCAGCAGCTTTCATGTCACAGCATGTGCCCTTTGAAGCAGACACAGAACTCAACAAAAGT---ATG??GGCAATAAATAAAGACGTCTTTCACAGCAGCTATAAAGAGACGGAAACTCATCAAGCAAACCTGCAGAACCTC---TGCCGCATTTGTGGTGCTTCATTTAAAACTGACCCTTGCAAGAGAAGTCACAACGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGATTCTGAGAAAGAGAGAGAGAAGGG?CACATCGTGGCCAGAACTTCTCGCCAAGGTGTTTAAGATTGACGTGAGAGGAGACATCGACACGATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCTGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGA{GT}GTTTGTAGCACTTCTTTCCATGGT{AG}TCAAGAGGAAGAAGCAAGGCCTGAATCTGCAGTTGAGCAAAAAGCTCAAGAGCACGACAGGGCATGCTAGAAAAATAAGGC??ATGAGAACTATGAAACCA{AG}TGAACAACAAGAGCTTAATGAAGAAGATTGCGGACTGCAGCAAGATCCACCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCA{AG}TAGAAACAGCATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_bengalensis_MVZ237483 TGGTCAGAGTCACCGAGCAGCAGGTTGATTCAGCAGCTTTCATGTCACAACATGTGCCCTCTGAAGCAGGCACAGAACTGAGCAAAAGT---ATGCCGGCAATAAATAAAGATGTCTTTCACAGCAGCTATAAAGAGATGGAAACTCATCAAGCAAACCTGCAGCACCTC---TGCCGCATTTGCGGTGGTTCGTTTAAAAGTGACCCTTGCAAGAGAAGCCACCCTGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGATTGTGAGAAAGAGAGAGAGAAGGGTCACGTCGTGGCCAGAACTTCTC?CCAAGGTGTTTAAGATTGACGTGAGAGGAGACATCGACACGATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCTCTGTGAATTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCTAACTGTGATGTTTGTAGCACTTCCTTCCATGGGGTCAAGAGAAAAAAGCAAGCCCTGAATCCTCAGTTGAGCAAAAAGCTCAAGAACACA---GGGCATGCTAGAAAAATAAGGTGCGTGAGAACTATGAAACCGATGAACAACAAGAGCTTAATGAAGAAGATTGCCAACTGCAGCAAGATCCATCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTTTGTGAGCATATCCTGTCTGACCCAGTAGAAACAACATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_exanthematicus_MVZ238935 TGGTCAGAGTTACCGAGCAACAGGTTGATTCAGCAGCTTTCATGACAAAGCACGTGCCCTTTGAAGCAGACACAGAACTCAACAAAAGT---ATGTCGGCAATAAATAAAGACGTCTTTCACAGCAGCTATAAAGGGACGGAAACTCATCAAGCAAACCTGCAGAACCTC---TGCCGCATTTGTGGAGCTTCGTTTAAAACTGACCCTTGCAAGAGAAGTCACCCTGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGAGAAGGGCCACGTCGTGGCCAGAACTTCTCGCCAAGGTGTTTAAGATTGACGTGAGAGGAGACATCGACACGATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCCGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGAGGTTTGTAGCACTTCCTTCCATGGGGTCAAGAGGAAGAAGCAAGGCCTGAATCTGCAGTTGAGCAAAAAGCTCAAGAGCACGACAGGGCATGCTAGAAAAATAAGGCACATGAGAACTATGAAACCGGTGAACAACAAGAGCTTAATGAAGAAGATTGCCGACTGCAGCAAGATCCACCTCAATACCAGTAGACTTGCAGTA?ACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACAACATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_griseus_MVZ236611 TGGTCAGAGTCGCCGAGCAACAGGTTGATTCAGCAGCTTTCATGTCACAACATGTGCCCTTTGAAGCAGGCACAGAACTGAACAAAAGT---TTGCC{AG}GCAATAAATAAAGACGTCTTTCACAGCAGCTATAAAGAGATGGAAACTCATCAAGCAAACCTGCAGCACCTC---TGCCGCATTTGCGGTGGTTCATTTAAAATTGACCCTTGCAAGAGAAGCCACCCTGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAGGAGAGAGAGAAGGGCCACGTCGTGGCCAGAACTTCTCGCCAAGGTGTTTAAGATTGATGTGAGAGGAGACATCGACACGATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCTGTGTGAAGTGTATTTTCCGAGGAATGATACAATGGAGTGGCATCCACATTCAGCCAACTGTGATGTTTGTAGCACTTCTTTCCATGGGGTCAAGAGAAAAAAGCAAGGCCTGAATCCACAGTTGAGCAAAAAGCTCAAGAACACGACAGGGCATGCTAGAAAAATAAGGCACATGAGAACTATGAAACCGGTGAACAACAAGAGCTTAACGAAGAAGATTGCCAACTGCAGCAAGATCCACTTCAGTACCAGTAGACTTGCAGTAGACTATCCCAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACGGCATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_niloticus_MVZ238936 TGGTCAGAGTTACCGAGCAACAGGTTGATTCAGCAGCTTTCATGTCACAACATGTGCCCTTTGAAGCAGACACAGAACTCAACAAAAGT---ATGCCGGCAATAAATAAAGACGACTTTCACAGCAGCTATAAAGAGATGGAAACTCATCAAGCAAACCTGCAGAACCTC---TGCCGCATTTGCGGTGGTTCGTTTAAAACTGACCCTTGCAAGAGAAGCCACCCTGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGCGAAGGGCCACGTCGTGGCCAGAACTTCTCACCAAGGTGTTTAAGATTGATGTGAGAGGAGACATCGACACGATCCACCCCACTCGCTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCCGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGATGTTTGTAGCACTTCCTTCCGTGGGGTCAAGAGGAAAAAGCAAGGCCTGAATCCACAGTTGAGCAAAAAGCTCAAGAGCACGACAGGGCATGCTAGAACAATAAGGCGCATGAGAACTATGAAACCGGTGAACAACAAGAGCTTAATGAAGAAGATTGCCAACTGCAGCAAGATCCACCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACAGCATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTATTGCCCATCCTGTC Varanus_ornatus_CAS207622 ??????????????????????????????????????????????????????????????????????CACAGAAATCAACAAAAGT---ATGCCGGCAATAAATAAAGACGACTTTCACAGCAGCTATAAAGAGATGGAAACTCATCAAGCAAACCTGCAGAACCTC---TGCCGCATTTGCGGTGGTTCGTTTAAAACTGACCCTTGCAAGAGAAGCCACCCTGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGCGAAGGGCCACGTCGTGGCCAGAACTTCTCACCAAGGTGTTTAAGATTGACGTGAGAGGAGACATCGACACGATCCACCCCACTCGCTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCCGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGATGTTTGTAGCACTTCCTTCCGTGGGGTCAAGAGGAAAAAGCAAGGCCTGAATCCACAGTTGAGCAAAAAGCTCAAGAGCACGACAGGGCATGCTAGAACAATAAGGCGCATGAGAACTATGAAACCGGTGAACAACAAGAGCTTAATGAAGAAGATTGCCAACTGCAGCAAGATCCACCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACAGCATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCT???????????????????????????????? Varanus_salvator_CAS212911 ??????????????GAGCAACAGG{CT}TGATTCAGCAGCTTTCATGTCACAACATGTGCCCTTTGAAGCAGGCACAGAACTGAGCAAAAAT---ATGCCGGCAATAAATAAAGACGTCTTTCACAGCAGCTATAAAGAGATGGAAACTCATCAAGCAAACCTGCAGCACCTC---TGCCGCATTTGCGGTGGTTAGTTTAAAACTGACCCTTGCAAGAGAAGCCACCCTGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGAGAAAGGCCACGTCGTGGCCAGAACTTCTCTCCAAGGTGTTTAAGATTGA{CT}GTGAGAGGAGACATCGACACAATCCACCCCACTCACTTTTGCCCCAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCGCCGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGATGTTTGTAGCACTTCCTTCCATGGGGTCAAGAGAAAAAAGCAAGCCCTGAATCCTCAGTTGAGCAAAAAGCTCAAGAACACGACAGGGCATGCGAGAAAAATAAGGCGCGTGAGAACTATGAAACCGGTGAACAACAAGAGCTTAATGAAGAAGATTGCCAACTGCAGCAAGATCCACCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGACCATATCCTGTCTGACCCAGTAGAAACAACATGCAAACACTTATTCTGCAGGGT{CG}TGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCCCATCCTGTC Varanus_sp_CAS238226 ????????????????????????????????????CTTTCATGTCACAATATGTGCCCTTTGAAGCAGGCACAGAACTGAACAAAAGT---ATGCCGGCAATAAATAAAGACGTCTTTCACAGCAGCTATAAAGAGATGGAAACTCATCAAGCAAACCTGCAGCACCTC---TGCCGCATTTGCGGTGGTTCGTTTAAAACTGACCCTTGCAAGAGAAGCCACCCTGTTCATGGGCCAGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGAGAAGGGCCACGTCGTGGCCAGAACTTCTCGCCAAGGTGTTTAAGATTGACGTGAGGGGAGACATCGACACGATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCTGTGTGAAGTGTATTTTCCAAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGATGTTTGTAGCACTTCCTTCCATGGGGTCAAGAGAAAAAAGCAAGCCCTAAATCCGCAGTTGAGCAAAAAGCTCAAGAACACGACAGGACATGCTAGAAAAATAAGGCGCGTGAGAACTATGAAACCGGTGAACAACAAGAGCTTAATGAAGAAGATTGCCAACTGCAGCAAGATCCACCTCAGTACCAGTAGACTTGCAGTAGACTATCCTAAAGACTTTGTAAAGTCAATCTCTTGCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTA{AG}AAACAACATGCAAACACTTATTCTGCAGGGTTTGCATTTTTAAATGTTTCAAAGTAATGGGGAACTACTGCCCATCCTGTC Varanus_yemenensis_MVZ236610 TGGTCAGAGTTACCGAGCAACAGGTTGATTCAGCAGCTTTCATGTCACAGCATGTGCCCTTTGAAGCAGACACAGAACTCAACAAAAGT---ATGCCGGCAATAAATAAAGA{CT}GTCTTTCGCAGAAGCTATAAAGAGACGGAAACTCATCAAGCAAACCTGCAGAACCTC---TGCCGCATTTGCGGTGCTTCATTTAAAACTGACCCTTGCAAGAGAAGTCACAACGTTCATGGGCCGGTGGATGAGGAGATGCAGGCGCTTCTGAGAAAGAGAGAGAGAAGGGCCACGTCGTGGCCAGAACTTCTCGCCAAGGTGTTTAAGATTGACGTGAGAGGAGACATCGACACGATCCACCCCACTCACTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAGTTCAGCAATTCCCTGTGTGAAGTGTATTTTCCGAGGAATGACACAATGGAGTGGCATCCACATTCAGCCAACTGTGAGGTTTGCAGCACTTC?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GCCAAGTCTGTGAGCATATCCTGTCTGACCCAGTAGAAACAGCATGCAAACACTTATTCTGCAGGGTCTGCATTTTTAAATGTCTCAAAGTAATGGGGAGCTACTGCTCATCCTGTC Xenosaurus_grandis TGGACAAAGTCGCTGAGGAACAGGCTGATGCGGCGGCTTTAATGTCACAACAAGTGCCCTTCGGAACAGACACCAAAATGAACAAAAGT---ATGCAGGCAATCAATAAGGACGTCTTTCATACGAACTATAGAGAGACTAAAGCTCATCAAGCAAACCTACAGCACCTT---TGCCGCATCTGCGGTGGCTCATTTAAAACCGACCCTTACAAGAGAAGCCACCCTGTTCATGGGCCAGTGGATGATGAGACACAGGCCCTTCTGAGAAAGAAGGAGAAAAGAGCCACGTCCTGGCCAGATCTTCTCGGCAAAGTTTTTAAGATTGATGTGAGAGGAGACATTGATACAATCCACCCTACTCATTTTTGCCACAATTGTTGGAATGTGGTTCAAAGGAAATCCAGCCACTCCCCGTGTGAAGTGTATTTCCCAAGGAATGGCACAATGGAGTGGCATCCCCATTCATCGAATTGTGACGTTTGCGGCACTTCCTTCCGTGGGGTCAAGAGAAAGAAGCAAGCCCTGAATCCACAATTGAGCAAAAAGCTCCGGATCGGTGCGGGACGTGCTAGAAAAATAAGGCATGTGAGGAACATGAGACAAGTGAACCAGAAGAGTTTGATGAAAAAGATTGCCAACTGCAAGAAGATCCATCTCAGTACCAAGATCCTTGCAGTAGACTACCCTGCAGACTTTGTAAAGTCAATCTCTTGCCAGGTCTGTGAGCACATCCTGTCTGACCCGGTAGAAACGACGTGCAAGCACTTATTCTGCAGAGTTTGCATCCTTAAATGCCTCAAAGTAATGGGGAGCTATTGCCCATCCTGTC ; END; [ The following blocks are output data for analysis step 7894 ] BEGIN TREES; TITLE Consensus_from_Dating_Analysis; LINK TAXA = TaxaForAnalysisStep7894; TREE TREE1 = [&R] ((((Heloderma_suspectum:93.05979484761744,Elgaria_panaminta:93.05979484761744):17.978273934484918,Xenosaurus_grandis:111.03806878210236):31.592671051000792,(Shinisaurus_crocodilurus:127.77188430165026,(((Varanus_griseus_MVZ236611:33.38419756861454,((Varanus_niloticus_MVZ238936:3.2015292695296864,Varanus_ornatus_CAS207622:3.2015292695296864):22.632123134412666,(((Varanus_yemenensis_MVZ236610:6.502684997016459,Varanus_albigularis_microstictus_MVZ241418:6.502684997016459):4.471945258563764,Varanus_albigularis_albigularis_AMB8890:10.974630255580209):5.602082297994798,Varanus_exanthematicus_MVZ238935:16.576712553574993):9.25693985036736):7.550545164672187):6.371751962538397,((Varanus_bengalensis_MVZ237483:27.909146975073014,Varanus_salvator_CAS212911:27.909146975073014):6.578789055967448,Varanus_sp_CAS238226:34.487936031040434):5.268013500112502):37.77057904693139,Lanthanotus_borneensis:77.52652857808432):50.245355723565936):14.858855531452889):76.4865149907323,(Ramphotyphlops_braminus:147.30695877133277,(Cylindrophis_ruffus:91.1919367863291,(Agkistrodon_strauchii:37.44064780608733,Dinodon_rufozonatum:37.44064780608733):53.751288980241796):56.11502198500368):71.81029605250268); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr48623] END; BEGIN TREES; TITLE Consensus_from_Dating_Analysis; LINK TAXA = TaxaForAnalysisStep7894; TREE TREE1 = [&R] ((((Heloderma_suspectum:93.05979484761744,Elgaria_panaminta:93.05979484761744):17.978273934484918,Xenosaurus_grandis:111.03806878210236):31.592671051000792,(Shinisaurus_crocodilurus:127.77188430165026,(((Varanus_griseus_MVZ236611:33.38419756861454,((Varanus_niloticus_MVZ238936:3.2015292695296864,Varanus_ornatus_CAS207622:3.2015292695296864):22.632123134412666,(((Varanus_yemenensis_MVZ236610:6.502684997016459,Varanus_albigularis_microstictus_MVZ241418:6.502684997016459):4.471945258563764,Varanus_albigularis_albigularis_AMB8890:10.974630255580209):5.602082297994798,Varanus_exanthematicus_MVZ238935:16.576712553574993):9.25693985036736):7.550545164672187):6.371751962538397,((Varanus_bengalensis_MVZ237483:27.909146975073014,Varanus_salvator_CAS212911:27.909146975073014):6.578789055967448,Varanus_sp_CAS238226:34.487936031040434):5.268013500112502):37.77057904693139,Lanthanotus_borneensis:77.52652857808432):50.245355723565936):14.858855531452889):76.4865149907323,(Ramphotyphlops_braminus:147.30695877133277,(Cylindrophis_ruffus:91.1919367863291,(Agkistrodon_strauchii:37.44064780608733,Dinodon_rufozonatum:37.44064780608733):53.751288980241796):56.11502198500368):71.81029605250268); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr48623] END;