#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 13, 2024; 3:31 GMT TreeBASE (cc) 1994-2008 Study reference: Groenenberg D., Neubert E., & Gittenberger E. 2011. Reappraisal of the ‘‘Molecular phylogeny of Western Palaearctic Helicidae s.l. (Gastropoda: Stylommatophora)’’: When poor science meets GenBank. Molecular Phylogenetics and Evolution, : 10. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11972] [ The following blocks are input data for analysis step 7992 ] BEGIN TAXA; TITLE TaxaForAnalysisStep7992; DIMENSIONS NTAX=43; TAXLABELS Albinaria_caerulea_AY546342_GR Arianta_arbustorum_AY546343_CH Arianta_arbustorum_JF717809_FR Arianta_arbustorum_JF717810_NL Caracollina_lenticula_AY546345_ES Caracollina_lenticula_JF717811_IT Cepaea_nemoralis_AY546350_DE Chilostoma_cingulatum_AY546354_IT Chilostoma_cingulatum_JF717812_AT Chilostoma_cingulatum_JF717813_IT Cochlicella_acuta_AY546355_FR Cochlicella_acuta_AY741442_IT Cochlicella_acuta_AY741443_IT Eobania_vermiculata_AY546357_FR Eobania_vermiculata_AY741409_IT Helicigona_lapicida_AY546360_DE Helicigona_lapicida_andorrica_JF717814_ES Helicigona_lapicida_andorrica_JF717815_ES Helicigona_lapicida_andorrica_JF717816_ES Helicigona_lapicida_lapicida_JF717817_BE Helicigona_lapicida_lapicida_JF717818_DE Helicodonta_obvoluta_AY546361_CH Helicodonta_obvoluta_JF717819_NL Helicopsis_striata_AY546362_DE Iberus_gualterianus_AY546365_ES Iberus_gualtierianus_gualtierianus_DQ822116_ES Iberus_marmoratus_EF440214_ES Isognomostoma_isognomostoma_AY546366_DE Isognomostoma_isognomostomos_JF717820_IT Isognomostoma_isognomostomos_JF717821_IT Marmorana_signata_JF717822_IT Oestophora_turriplana_AY546369_PT Otala_lactea_AY937264_ES Otala_punctata_AY546370_ES Otala_punctata_JF717823_ES Otala_punctata_JF717824_ES Otala_punctata_JF717825_ES Pseudotachea_splendida_AY546372_ES Pseudotachea_splendida_AY937266_ES Zonites_algirus_AY546381_FR Zonites_algirus_JF717826_GR Zonites_casius_EF568987_GR Zonites_pergranulatus_cycladicus_EF568963_GR ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M10432] TITLE 'Fig.2_16S'; LINK TAXA = TaxaForAnalysisStep7992; DIMENSIONS NCHAR=326; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Albinaria_caerulea_AY546342_GR GACTTTTAAATGGAGCCTAGAATGAAAGAAA-GAACGTATGCAACTTGTCT--CATTGATATTACTTTAAATTTAATGGTTGAGTGAAAATACTCATAAT--TTAATAATAGACGAGAAGACCCTTAGAATTTTTAAAAGCAATAACTAATT-CTTATTAGATTTTTTGTTGGGGCAACAATATTTCAAAT--------------AATAAATA-TAT-TAATGAAAGTAATAAGTCGAATAA---ATAATTATAG----AAAAATTACTCTAGGGATAACAGCATAATTTATTAATAAGCTTGTGACCTCGATGTTGGACTAGGTT Arianta_arbustorum_AY546343_CH GACTTATAATTGAAGTCTAGAATGAATGAAT-ATACGGGCAGCGACTGTCT--CAGGAGTA-TTTTACTAACTTAGTTACCAAGTGCAAATACTTGAAGT--TATAAAAAAGACGAGAAGACCCTAGAAACTTTATTTTA------------------------TTTTGTTGGGGCGACAGAATTACAATAT-------------AACTAA---TTT-TA-------TATTACAAGAAATAT---AAGGGAAAGA----ACAAGTTACTCTAGGGATAACAGCATAATTTAATC-TAAGTTTGTGACCTCGATGTTGGACTAGGTA Arianta_arbustorum_JF717809_FR GACTTATAATTGAAGTCTAGAATGAATGAAT-ATACGGGCAGCAACTGTCT--CAGAAGTATTTTAATTAATTTAGTTACCAAGTGCAAATACTTGAAGT--TATAAAAAAGACGAGAAGACCCTAGAAACTTTAATTAA------------------------TTTTGTTGGGGCGACAGAATTACAATATA------------AACTAA---TTT-TA-------TATTACAAGAAACAT---AGGCGGAAGA----ACAAGTTACTCTAGGGATAACAGCATAATTTAATC-TAAGTTTGTGACCTCGATGTTGGACTAGGTA Arianta_arbustorum_JF717810_NL GACTTATAATTGAAGTCTAGAATGAATGAAT-ATACGGGCAGCAACTGTCT--CAGAAGTATTTTAATTAATTTAGTTACTAAGTGCAAATACTTGAAGT--TATAAAAAAGACGAGAAGACCCTAGAAACTTTAATTAA------------------------TTTTGCTGGGGCGGCAGAATTACAATATA------------AACTAA---TTT-TA-------TATTACAAGAAACAT---AGAAGGAAGA----ACAAGTTACTCTAGGGATAACAGCATAATTTAATC-TAAGTTTGTGACCTCGATGTTGGACTAGGTA Caracollina_lenticula_AY546345_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAAAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--TATAGAAAAGACGAGAAGACCCTAGAAACTTTAAAT--------------------------TTTTGTTGGGGCGACAAATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGGGAAAGA----TTAAGTTACTTTAGGGATAACAGCATAATGAAAAA-T-CGTTTGGGACCTCGATGTTGGACTAGGTT Caracollina_lenticula_JF717811_IT GGCCTATAATTGAGGTCTGGCATGAATGGAA-ACCTGGGTAAAATCTGTCT--TATCCTAA-TTAATAAAACTTACTTAATAAGTGCAAATACTTATGTATTAATATAATAGACGAGAAGACCCTAGAAATTTTATATAATGTAGTGACTCGGTACTACTA---TTTTGTTGGGGCGACAGGATAACAAAT--------------AACTTA---TCCATA-------TATAATTTGAAGTTAC--TCAGCATATA----AATAATTACTCTAGGGATAACAGCATAATTTGTTT-CAAGTTTGTGACCTCGATGTTGGACTAGGGT Cepaea_nemoralis_AY546350_DE GGCTTATAATTGAAGTCTGGTATGAAAGAAC-TCATGGGAGGTAACTGTCT--CCAGGGTA-TAGTACTAAATTAGTAAGTAAGTGAAAATACTTACGA---GAGAAAATAGACGAGAAGACCCTAGAAGCTTGCTATTTG-----------------------TTTTGTTGGGGCGACAGAATTGCATTT--------------AAACCA---ATTTTA--------TAGATGTGACGAG----AGCAGGAAAA----TTAAGCTACTCTAGGGATAACAGCATAATAAAATT---TGTTTGTGACCTCGATGTTGGACTAGGTA Chilostoma_cingulatum_AY546354_IT GGCTTATAATTGAAGTCTAGAATGAACGAAA-TAACGGGTAGTAGCTGTCT--CATAAATAATATTAC-AATTTAGTAAGTAAGTGCAAAAACTTACAAC--ATTATAATAGACGAGAAGACCCTAGAAATTTTTATATAAGT---------------------TTTTGTTGGGGCGGCAGAGTTATATAATGTTGTAAGTTTTGCACTTA---CTT-TA-------TATAACATGTAGTAA---------AAGA----GACAGATACTCTAGGGATAACAGCATAATTTTAA----AGTTTGTGACCTCGATGTTGGACTAGGAA Chilostoma_cingulatum_JF717812_AT GACTTATAATTGAAGTCTGGCATGAACGAAT-TTACGGGTAACGACTGTCT--TAGGGAAAAATTAAAGAATTTAATTATCAAGTGCAAATGCTTGAGGA--CTTAAAATAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAAAATTACACGG--------------AACTAA---TTTTAA-------TATTACGTGAAGCGT---AGAAGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATTTATAA-T-AGTTTGTGACCTCGATGTTGGACTAGGTA Chilostoma_cingulatum_JF717813_IT GACTTATAATTGAAGTCTGGCATGAACGAAT-TTACGGGTAACGACTGTCT--TAGGGAAAAATTAAAGAATTTAATTATCAAGTGCAAATGCTTGAGGA--CTTAAAATAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAAAATTACACGG--------------AACTAA---TTTTAA-------TATTACGTGAAGCGT---AGAAGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATTTATAA-T-AGTTTGTGACCTCGATGTTGGACTAGGTA Cochlicella_acuta_AY546355_FR GGCTTATAATTGAAGTCCGGCATGAATGAAG-TTACGGGTAGCTACTGTCT--TAAGAAGAGTAAGGTAATTTTAGTTACTAAGTGCAAATCCTTATAAA--CAAAGAAAAGACGAGAAGACCCTAGAAACTTTAGAA--------------------------TTTTGTTGGGGCGACAGGTCTACAGTGA-------------AACTAC---GAC-TT-------ATAAACTTGAAACAAC--TGGTGTAAGA----TTAAGTTTCTCTAGGGATAACAGCATAA-GATAAA-T-CGTTTGTGACCTCTATGTTGGACTAGGTT Cochlicella_acuta_AY741442_IT GGCTTGTAATTTAAGTCTGGTATGAATGTAG-TTTTAGGCTAAAGCTGTCT--CTTTATAT-TAATTGGAATTTACTTAGCCGGTGAAAATGCCGGCAGT--TAAATAATAGACGAGAAGACCCTAGAAATTTTGTGAAAGGTACAAGTAG--TATGTATTGGATTTTGTTGGGGCGACAGAGTAACAATTTA------------AACTTA---CTC-TA-------TTTAATGTGAATTAG---TTATGGAAGT----GTAAATTACTCTAGGGATAACAGCATAATTCTATT-AGTGTTTGTGACCTCGATGTTGGACTAGGAA Cochlicella_acuta_AY741443_IT GGCTTGTAATTTAAGTCTGGTATGAATGTAG-TTTTAGGCTAAAGCTGTCT--CTTTATAT-TAATTGGAATTTACTTAGCCGGTGAAAATGCCGGCAGT--TAAATAATAGACGAGAAGACCCTAGAAATTTTTTGAAAGGTATAAATAG--TATGTATTGGATTTTGTTGGGGCGACAGAGTAACAGTTTA------------AACTTA---CTC-TA-------TTTAATGTGAATTAG---TTATGGAAGT----GTAAATTACTCTAGGGATAACAGCATAATTCTATT-AGTGTTTGTGACCTCGATGTTGGACTAGGAA Eobania_vermiculata_AY546357_FR GGCTTCTAATTAAAGTCTGGAATGAACGAAC-TCATGGGTAGCAACTGTCT--CTAAAATA-GTTTATTAAATTGATCAATAAGTGCAAATACTTATTCA--ATTATAATAGACGAGAAGACCCTAGAAACTTATAATTA------------------------TTTTGTTGGGGCGACAGAATTACATAA--------------AACTAA---TTT-TA-------TTTTACGGGACGTAA---AACACCCACA----AAAAGTTACTCTAGGGATAACAGCATAATTTT----------------------------------A Eobania_vermiculata_AY741409_IT GGCCTCTAATTAAGGTCTGGAATGAACGAAC-TTATGGGTAGCAACTGTCT---TAAAATA-GTTAATTAAATTGATTAATAAGTGCAAATACTTATTCA--GTTACATTAGACGAGAAGACCCTAGAAACTTATAATTA------------------------TTTTGTTGGGGCGACAGAATTACATAA--------------AACTAA---TTT-TA-------TTTTACAAGACGTAA---AGCAGAAAGA----AAAAGTTACTCTAGGGATAACAGCATAATTTTTTA-T-AGCTTGTGACCTCGATGTTGGACTAGGTA Helicigona_lapicida_AY546360_DE GGCTTATAATTGAAGTCTTGTATGAACGAAT-TAATGGGTAATAACTGTCT--GTTAAAGT-TTAATAGAAATTATTTAGCAAGTGAAAATACTTGTAGA--TAACTAATAGACGAGAAGACCCTAGAAATTTTATATAATATAGTGT-----GTTTATTATTATTTTGTTGGGGCGACAGAATAACAAAT--------------AACTTA---TTT-TA-------TTTGATTAGCACTATTTAATGAGAAAAA----TTAAATTACTCTAGGGATAACAGCATAATTTTTA--TAAGTTTGTGACCTCGATGTTGGACTAGGGA Helicigona_lapicida_andorrica_JF717814_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAGAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--CATAGAAAAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAAATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGCGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGAAAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_andorrica_JF717815_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAGAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--CATAGAAAAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACA{AG}ATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGCGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGAAAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_andorrica_JF717816_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAGAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--CATAGAAAAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAGATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGCGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGAAAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_lapicida_JF717817_BE GGCTTATAATTGAAGTCTGGCATGAATGAAG-TTACGGGTAGCTACTGTCT--TAAGAAGAGTAAGGTAATTTTAGTTATTAAGTGCAAATACTTATAAA--CAAAGAAAAGACGAGAAGACCCTAGAAACTTTAGAA--------------------------TTTTGTTGGGGCGACAGGTCTACAGTGA-------------AACTAG---ATT-TA-------CAAAACTTGAAACAAC--TGGCGTAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGATAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_lapicida_JF717818_DE GGCTTATAATTGAAGTCTGGCATGAATGAAG-TTACGGGTAGCTACTGTCT--TAAGAAGAGTAAGGTAATTTTAGTTATTAAGTGCAAATACTTATAAA--CAAAGAAAAGACGAGAAGACCCTAGAAACTTTAGAA--------------------------TTTTGTTGGGGCGACAGGTCTACAGTGA-------------AACTAG---ACT-TA-------TAAAACTTGAAACAAC--TGGTGTAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGATAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicodonta_obvoluta_AY546361_CH GGCTTATAATTGAAGTCTGGTATGAATGAAT-ATATGGGTACCAACTGTCT--CCACTATA-TAACATGAATTTACTGATTGGGTGCAAATTCCCATTTC--AAGATAATAGACGAGAAGACCCTAGAAATTTTCAATTACACT--------------------TTTTGCTGGGGCGGCAGAATAACACAA--------------AACTTA---TTT-TA------CTATATTATCTAATAT---ATTATGGAAA----AACAATTACTCTAGGGATAACAGCATAATTTATTT---AGTTTGTGACCTCGATGTTGGACTAAGGT Helicodonta_obvoluta_JF717819_NL GGCTTATAATTGAAGTCTGGTATGAATGAAT-ATATGGGTACCAACTGTCT--CCATTATA-TAACATGAATTTACTGATTGGGTGCAAATTCCCATTTC--AAGATAATAGACGAGAAGACCCTAGAAATTTTCAATTACACT--------------------TTTTGCTGGGGCGGCAGAATAACACAA--------------AACTTA---TTT-TA------CTATATTATCTAATAT---ATTATGGAAA----AACAATTACTCTAGGGATAACAGCATAATTTATTT---AGTTTGTGACCTCGATGTTGGACTAAGGT Helicopsis_striata_AY546362_DE GGCTTATAATTGAAGTTTGGCATGAATGAAT-TAATGGGGAACATCTGTCT--ATGATGTT-CTACTAGAATTTAATTAAGGAGTGAAAATTCTTCATAA--ATAAATAAAGACGAGAAGACCCTAGAAATTTTATTTATCTAGTATA-----ATACTATATCATTTTGTTGGGGCGACAGAATAACAGAT--------------AAC---------------------------------------------------------------------------------------------------------------------- Iberus_gualterianus_AY546365_ES GGCTCCTAATTAAAGTCTGGTATGAATGAAT-ATATGGAAATAAGCTGTCT--CTAATATATTATTATTAAATTGG-TAGTAAGTGCAAATCCTTACGTA--AATATTAAAGACGAGAAGACCCTAGAAATTTAAATAATTA----------------------TTTTGTTGGGGCGACAATACTACAGTT--------------?T?TCA-----------------------CGACGCGA---TGTTGAAAGA----AGAAATTACTCTAGGGATAACAGCATAATTTAATA---CGTTTGTGACCTCGATGTTGGACTAGGTA Iberus_gualtierianus_gualtierianus_DQ822116_ES GGCTTTTAATTAGAGTCTGGTATGAATGAAT-ATATGGGTTACAGCTGTCT---TAGAATATTATTTTGAATTTGG-ATGTAAGTGAAAATCCTTACCTA--AATAAAAAAGACGAGAAGACCCTAGAAGCTTACATTAATA----------------------TTTTGTTGGGGCGACAGAATTACACTT--------------AACTAG---TTT-TA-------AAAAACGGGACGCGG---GGCTGATAGA----ACAAGCTACTCTAGGGATAACAGCATAATTTTTC----CGTTTGTGACCTCGATGTTGGACTAGGTA Iberus_marmoratus_EF440214_ES GGCTCCTAATTAGAGTCTGGTATGAATGAAT-ATATGGAAATAAGCTGTCT---TAATATATTATTATTAAATTGG-TAGTAAGTGCAAATCCTTACGTA--AATATTAAAGACGAGAAGACCCTAGAAATTTAAATAATTA----------------------TTTTGTTGGGGCGACAGAACTACAGTT--------------AACTAG---TTT-TA-------TGTAACATGACGTA----TACTGGAAGA----ATAAATTACTCTAGGGATAACAGCATAATGTAAC----CGTTTGTGACCTCGATGTTGGACTAGGTA Isognomostoma_isognomostoma_AY546366_DE GGCTTATAATTGAAGTCTAGCATGAACGAAT-ATACGGGCAGTAGCTGTCT--TAGGAGTAATATAGTGAATTTAATTATCAAGTGCAAATGCTTGCAGC--ATTAAAAAAGACGAGAAGACCCTAGAAACTT-------------------------------TTTTGTTGGGGCGACAGGATTGCAACT--------------AACAGT---CTTATT-----GCACTTACATATAACAT---GTAGTAAAAG----AGAAGTTACTCTAGGGATAACAGCATAATTTTAT----AGTTTGTGACCTCGATGTTGGACTAGGAA Isognomostoma_isognomostomos_JF717820_IT GGCTTATAATTGAAGTCTAGAATGAACGAAC-TTACGGGCAGTAGCTGTCT--TAGGAATAGTATAGTGAATTTAATTATCAAGTGCAAATGCTTGCAGC--ATTAAAAAAGACGAGAAGACCCTAGAAACTTTCTA---------------------------TTTTGTTGGGGCGACAGGATTGCAACT--------------AACCAG---TCT-TA-------TTATACGGGACGTAT---AGCAGCAAGA----CGAAGTTACTCTAGGGATAACAGCATAATTTTATA-T-AGTTTGTGACCTCGATGTTGGACTAGGAA Isognomostoma_isognomostomos_JF717821_IT GGCTTATAATTGAAGTCTAGAATGAACGAAC-TTACGGGCAGTAGCTGTCT--TAGGAATAGTATAGTGAATTTAATTATCAAGTGCAAATGCTTGCAGC--ATTAAAAAAGACGAGAAGACCCTAGAAACTTTCTA---------------------------TTTTGTTGGGGCGACAGGATTGCAACT--------------AACCAG---TCT-TA-------TTATACGGGACGTAT---AGCAGCAAGA----CGAAGTTACTCTAGGGATAACAGCATAATTTTATA-T-AGTTTGTGACCTCGATGTTGGACTAGGAA Marmorana_signata_JF717822_IT GGCTTATAATTGAAGTCTAGAATGAACGAAA-TAACGGGTAGTAGCTGTCT--CATAAATAATATTACAAATTTAGTAAGTAAGTGCAAAAACTTACAAC--ATTATATTAGACGAGAAGACCCTAGAAATTTTTATATAAGT---------------------TTTTGTTGGGGCGACAGAGTTATAGAA--------------AACTAA---CTT-TA-------TATAACATGTAGTAT---TAAAGAAAGA----TTAAATTACTCTAGGGATAACAGCATAATTTAAAAT--AGTTTGTGACCTCGATGTTGGACTAGGTA Oestophora_turriplana_AY546369_PT GTCTCATAATTGGAGTTTAGAATGAATGGAA-GCATGGGGTTAAACTGTCT--CTTTAAAT-ATGAATGAATTTACTACACAAGTGAAAATTCTTGTAAA--AACATAAAAGACGAGAAGACCCTAGAAATTTTAATAAACGT---------------------TTTTGTTGGGGCGGCAGAATAACAATA--------------ACCTTA---TTT-TA-------TAATATTAGAAGGTT---ATTAAAGAGACCTTATAAAGTACTCTAGGGATAACAGCATAA--------------------------------------- Otala_lactea_AY937264_ES GGCTTTTAATTAAAGTCTGGGATGAATGAAA-GCATGGGTAACGGCTGTCTTACTATTAAATTATATTGAAGTTAGTAAGTAAGTGAAAATACTTACAA---TTTAAAAAAGACGAGAAGACCCTAGAAACTTGTGTAATTA----------------------TTTTGTTGGGGCGACAGAATTACAAAA--------------AACTAA---TTC-TC-------CTATACGTGACGTT----GACAGATAGA----TCAAGTTACTCTAGGGATAACAGCATAATTTTTAC---AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_AY546370_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGCCTGTCT-ACTATTATA-TTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_JF717823_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGACTGTCT-ACTATTATATTTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_JF717824_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGACTGTCT-ACTATTATATTTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_JF717825_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGACTGTCT-ACTATTATATTTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Pseudotachea_splendida_AY546372_ES GGCTCTTAATTAGAGTCTGGTATGAACGAAT-GTATGGAAAGTGGCTGTCT--CTATGGTA-TACATCAAAATTGG-TAGTAAGTGCAAATCCTTACATA--CATTTAATAGACGAGAAGACCCTAAAAACTTAATGAAAT-----------------------TTTTGTTGGGGCGACAGAACTACAATAA-------------AACTAG---TTT-TA-------AAATACAAGACGTA----AACTGAAAGA----CAAAGCTACTCTAGGGATAACAGCATAATGTAAA----CGTTTGTGACCTCGATGTTGGACTAGGTA Pseudotachea_splendida_AY937266_ES GGCTCTTAATTAGGGTCTGGTATGAACGAAT-GTATGGAAAGTAGCTGTCT--CTATAATA-GATTTCAAAATTGG-TAGTAAGTGCAAATCCTTACAT-----TCTAATAGACGAGAAGACCCTAGAAGCTTAAAAAAAT-----------------------TTTTGTTGGGGCGACAGAACTACAATTA-------------AACTAG---TTT-TA-------TAATACAAGACGTA----TACTGTAAGA----TAAAGCTACTCTAGGGATAACAGCATAATGTAAA----CGTTTGTGACCTCGATGTTGGACTAGGTA Zonites_algirus_AY546381_FR GTCTTTTAATTGGAGACTGGAATGAAAGGAT-GTATGGATCATAGCTGTCT--CCTGCAAC-TTATACAAAATTACTTAAAGGGTGAAAATTCCCTTAAT--ATTACATTAGACGAGAAGACCCTTAAAATTATAACAAAAATACAACT----AACTATTGAGTGTTTGTTGGGGCAACAGAGTATCTAAA--------------AACATA---CTTATAAGCATATACTCACAACCAAATA---ATAGTAGCAA----TGAAATTACTCTAGGGATAACAGCATAATTTATTA-TAAGATTGGGACCTCGATGTTGGACTCAG?? Zonites_algirus_JF717826_GR GACCTTTAATTGGGGCCTAGAATGAATGAATAAAATGGGGGAAAACTGTCT--TAGCTATACTGATTAAAAATTTCTTTGAAGGTGAAAATTCCTTTAAA--ACTTTAATAGACGAGAAGACCCTAGGAGTTTAAAAATATTGTTTAAATAAAAATAAATTTTTTTTTGTTGGGGCGACAATTTAACAGAA--------------AACTTAAA---T-AAAAAAATTGACATAACGAAATTT---TTAATTAAGA----ATAAACTACCCTAGGGATAACAGCATAATTTTTTA-AAAGTTTGTGACCTCGATGTTGGATTAGGAA Zonites_casius_EF568987_GR GACTTTTAAATGAGGCCTAGAATGAATGAAT-TTATGGATAAATACTGTC?--TAAGTAAATTGTTTAAAAGTTTCTTAATAGGTGAAAATTCCTTTAAA--AATTTAATAGACGAGAAGACCCTGGGAGTTTAA---------------------TTAGTATATTTTGTTGGGGCGAC?ATTTAACAAAT--------------AACTTAAATTTT-TAA--GTGTTTTAAACGAA?ATTT---TTAATTA?GG----GTAAACTACCCCAGGGATAACAGCATAATTTTTTG-AAAGTTTGTGACCTCGATGTT?????????? Zonites_pergranulatus_cycladicus_EF568963_GR GACCTTTAATTGAGGCCTGGAATGAATGAATAAAATGGGGGGAACCTGTCT--TTTTTACATTAATTAAAAATTACTTAGGAGGTGAAAATTCCTTTAAA--AATTTAATAGACGAGAAGACCCTAGGAGTTTAAAATAAAGGAAAAG----------------TTTTGTTGGGGCGACAATTTAACAAAA--------------AACTTAAAGTTT-AAATGGATTTTTATAACGATTTTT---CTAATTTAAA----ATAAACTACCCTAGGGATAACAGCATAATTTTTT--TAAGTTTGTGACCTCGATGTT?????????? ; END; BEGIN CODONS; CODONPOSSET * UNTITLED (CHARACTERS = 'Fig.2_16S') = N: 1-326; END; [ The following blocks are output data for analysis step 7992 ] BEGIN TREES; TITLE 'Trees from "16S-43-NJ-Fig2.tre"'; LINK TAXA = TaxaForAnalysisStep7992; TREE nj = [&R] (((((((((((((Arianta_arbustorum_JF717810_NL:0.01096,Arianta_arbustorum_JF717809_FR:0.00784):0.01347,Arianta_arbustorum_AY546343_CH:0.02634):0.05433,((Isognomostoma_isognomostomos_JF717820_IT:0.0,Isognomostoma_isognomostomos_JF717821_IT:0.0):0.05207,Isognomostoma_isognomostoma_AY546366_DE:0.0656):0.03806):0.00288,(Chilostoma_cingulatum_JF717813_IT:0.0,Chilostoma_cingulatum_JF717812_AT:0.0):0.0879):0.0068,((((Helicigona_lapicida_andorrica_JF717814_ES:0.00141,Helicigona_lapicida_andorrica_JF717815_ES:-0.00141):0.00158,Helicigona_lapicida_andorrica_JF717816_ES:3.2E-4):0.00493,Caracollina_lenticula_AY546345_ES:0.01515):0.03717,((Helicigona_lapicida_lapicida_JF717817_BE:0.00555,Helicigona_lapicida_lapicida_JF717818_DE:0.00585):0.0062,Cochlicella_acuta_AY546355_FR:0.03583):0.03626):0.0717):0.00902,(((((((Otala_punctata_JF717823_ES:0.0,Otala_punctata_JF717824_ES:0.0):0.0,Otala_punctata_JF717825_ES:0.0):0.00136,Otala_punctata_AY546370_ES:0.00243):0.07313,Otala_lactea_AY937264_ES:0.07008):0.02423,(((Iberus_gualterianus_AY546365_ES:0.03458,Iberus_marmoratus_EF440214_ES:0.02602):0.04372,(Pseudotachea_splendida_AY546372_ES:0.03771,Pseudotachea_splendida_AY937266_ES:0.02854):0.04537):0.01133,Iberus_gualtierianus_gualtierianus_DQ822116_ES:0.08301):0.02351):0.0062,(Eobania_vermiculata_AY546357_FR:0.04305,Eobania_vermiculata_AY741409_IT:0.02374):0.07165):0.00723,Cepaea_nemoralis_AY546350_DE:0.13038):0.00817):0.00104,(Marmorana_signata_JF717822_IT:0.024,Chilostoma_cingulatum_AY546354_IT:0.02665):0.07867):0.01585,(Cochlicella_acuta_AY741443_IT:0.0067,Cochlicella_acuta_AY741442_IT:0.00724):0.14151):0.0077,(Helicigona_lapicida_AY546360_DE:0.09747,(Helicopsis_striata_AY546362_DE:0.13419,Oestophora_turriplana_AY546369_PT:0.14117):0.01538):0.00306):0.00565,Caracollina_lenticula_JF717811_IT:0.1277):0.00761,(Helicodonta_obvoluta_AY546361_CH:0.00234,Helicodonta_obvoluta_JF717819_NL:0.00142):0.11419):0.00892,(Zonites_algirus_AY546381_FR:0.16471,Albinaria_caerulea_AY546342_GR:0.15545):0.01573):0.07555,((Zonites_pergranulatus_cycladicus_EF568963_GR:0.05953,Zonites_algirus_JF717826_GR:0.07089):0.00415,Zonites_casius_EF568987_GR:0.07756):0.00415); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr48903] END;