#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 23:47 GMT TreeBASE (cc) 1994-2008 Study reference: Srivastava P.K., & Shenoy B.D. 2012. Stimulatory effects of fungi on plant growth promotion and soil properties. Microbes and Environments, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12359] [ The following blocks are input data for analysis step 8584 ] BEGIN TAXA; TITLE TaxaForAnalysisStep8584; DIMENSIONS NTAX=28; TAXLABELS Preussia_funiculata_AY943059 Preussia_funiculata_GU934563 Preussia_sp_HQ130702 Pycnidiophora_aurantiaca_AY943057 Pycnidiophora_dispersa_AY943055 Pycnidiophora_sp_FJ903343 Pycnidiophora_sp_GU595028 Pycnidiophora_sp._FNBR3 Westerdykella_angulata_GQ203757 Westerdykella_angulata_GQ203758 Westerdykella_cylindrica_AY943056 Westerdykella_cylindrica_DQ491519 Westerdykella_dispersa_DQ468016 Westerdykella_dispersa_DQ468030 Westerdykella_dispersa_DQ468031 Westerdykella_dispersa_GQ203797 Westerdykella_dispersa_GQ203798 Westerdykella_globosa_AY943046 Westerdykella_multispora_AY943048 Westerdykella_multispora_GQ203799 Westerdykella_nigra_AY943049 Westerdykella_nigra_GQ203800 Westerdykella_ornata_AY943045 Westerdykella_ornata_GQ203801 Westerdykella_purpurea_AY943050 Westerdykella_purpurea_FJ624258 Westerdykella_sp_AB563198 Westerdykella_sp_DQ468029 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M11581] TITLE FNBR3_ITS; LINK TAXA = TaxaForAnalysisStep8584; DIMENSIONS NCHAR=522; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Preussia_funiculata_AY943059 CATTATCGTGGGGCTTCGGCCCTCTCGAGATAGAACCC-TTGCCTTTTTGAGTACC--TTCGTTTCCTCGGCAGGCTCGCCTGCCAATGGGGACCCCAATAAACCCTTTGTAA-TACCTG------TAATCGTCTGA-CAAAA---CAAACAAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTCAAACCTTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCCTGCCTCACGGCGCGGACTCGCCTCAAATCTATTGGCGGCCGGCA---CGTTGGCTTCGAGCGCAGCAGAAACGCGAACTCGAGACCGG-CGGATCGGCTCCCAGAAGCTACCCCCCATGAATTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Preussia_funiculata_GU934563 CATTATCGTGGGGCTTCGGCCCTCTCGAGATAGAACCC-TTGCCTTTTTGAGTACC--TTCGTTTCCTCGGCAGGCTCGCCTGCCAATGGGGACCCCAATAAACCCTTTGTAA-TACCTG------TAATCGTCTGA-CAAAA---CAAACAAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTCAAACCTTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCCTGCCTCACGGCGCGGACTCGCCTCAAATCTATTGGCGGCCGGCA---CGTTGGCTTCGAGCGCAGCAGAAACGCGAACTCGAGACCGG-CGGATCGGCTCCCAGAAGCTA-CCCCCATGAATTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Preussia_sp_HQ130702 CATTATCGTAGGGCTTCGGCCCTGTCGAGATAGAACCC-TTGCCTTTTTGAGTACCT-TTCGTTTCCTCGGCAGGCTCGCCTGCCAATGGGGACCACAAAAAACACTTTGCAG-TACCTG------TAACAGTCTGAACAAAC---AAAACAAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCTTAGGGCATGCCTGTTCGAGCGTCATTTAAACCTTCAAGCTAAGCTTGGTGTTGGGTGACTGTC-CGCTTCACT--GCGGACTCGCCTCAAAATTATTGGCGGCCGGTA---CATTGGCTTCGAGCGCAGCAGAAACGCGAACTCGGGCCCGT-CGTATTGGCTCCCAGAAGCTA-TCTTCACAATTTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Pycnidiophora_aurantiaca_AY943057 CATTATCGGGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCCGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-CTTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAAC-AAA---AAAACCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCTCCA-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATATGCGTCTTCGTGCCTAG-CAGATCGGCTCCCAGAAGCTAAATCTCACATGTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Pycnidiophora_dispersa_AY943055 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAACGGGGACC-ATTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAAC-AAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCTTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTCACATTTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Pycnidiophora_sp_FJ903343 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAACGGGGACC-ATTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAAC-AAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCTTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTCACA????????????????????????????????????????????????? Pycnidiophora_sp_GU595028 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-CCTTAAACTCTTGCAATCAACCTGAAC--AATATCGTCTGAATTAAA---AAAATTTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGCTGGGTGACTGTGGCCCCTCG-G--GTCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATTTGCGTCTCATCGCCCCT-CGGATCGGCTCCCAGAAGCTAAATCTCACATTTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTTAGCATATCA Pycnidiophora_sp._FNBR3 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCCGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-CTTTAAACTCTTGCAATCAACCTGAAC--ACAATCGTCTGAAC-AAA---AAAACCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCTCCA-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATATGCGTCTTCGTGCCTAG-CAGATCGGCTCCCAGAAGCTAAATCTCACATGTTTGACCTCGAATCA-GTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_angulata_GQ203757 CATTATCGTGGGGCTCCGGCCCCTTCGAGAGATCACCC-TTGCCTTTTCGAGCACCTGTTTGTTGCCTCGGCAGGCGCGCCTGCCGATGGACACC-CCTTAAACTCTTGCAAT-AACCTGTGC--AAAATCGTCTGAACAAAA--CAAAACCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGTGACTGTGGCCCCT------GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTTCTGTGTAGGCTTCGAGCGCAGCACATGTGCGCCTTCGTGGCCCG-CGTATCGGCTCCCAGAAGCTAAATCTAACT????????????????????????????????????????????????? Westerdykella_angulata_GQ203758 CATTATCGTGGGGCTCCGGCCCCTTCGAGAGATCACCC-TTGCCTTTTCGAGCACCTGTTTGTTGCCTCGGCAGGCGCGCCTGCCGATGGACACC-CCTTAAACTCTTGCAAT-AACCTGTGC--AAAATCGTCTGAACAAAA--CAAAACCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGTGACTGTGGCCCCT------GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTTCTGTGTAGGCTTCGAGCGCAGCACATGTGCGCCTTCGTGGCCCG-CGTATCGGCTCCCAGAAGCTAAATCTAACT????????????????????????????????????????????????? Westerdykella_cylindrica_AY943056 ??????????????????????????????TACAATCC-TTGCCTTTT-GAGCACATTTTTGCCTCCTCGGCAGGCTCGCCTGCCAATGGGGACC-CCCTCAACTCTTGCAAT-AACATG------TAATTGTCTGAACAA-----AAACAACAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCCATGAAGAACGCACCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACAACCTCAAGCTCAGCTTGGTGATGGGTGACTGTGGCCCCCCGCG--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTA---CGTAGGCTTCGAGCGCAGCACATTTGCGTCCTCGTGGCTCT-CTGATCGGCTCCCAGAAGCTATTTCTCA--TGTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_cylindrica_DQ491519 CATTATCGTGGGGCTTCGGCCTCTAT-CGGGAGAATCC-TTGCCTTTT-GAGCACCTTTTTGTTTCCTCGGCAGGCTCGCCTGCCAATGGGGACC-CCCTCAACTCTTGCAAT-AACATG------TAATTGTCTGAACAA-----AAACAACAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACAACCTCAAGCTCAGCTTGGTGATGGGTGACTGTGGCCCCCCGCG--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTA---CGTAGGCTTCGAGCGCAGCACATTTGCGTCCTCGTGGCTCT-CTGATCGGCTCCCAGAAGCTATTTCTCA--TGTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATA??? Westerdykella_dispersa_DQ468016 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAACGGGGACC-ATTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAACAAAA---AAAATCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCTTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTCACATTTTTGACCTCGAATCA???????????????????????????????? Westerdykella_dispersa_DQ468030 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-ATGTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAACAAAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGCGCGTCTTCGTGCCTAG-CGGATCGGCTCCCAGAAGCTAAATCTGACATTTTTGACCTCGAATCA???????????????????????????????? Westerdykella_dispersa_DQ468031 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAACGGGGACC-ATTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAAC-AAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCTTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTCACATTTTTGACCTCGAATCA???????????????????????????????? Westerdykella_dispersa_GQ203797 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAACGGGGACC-ATTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAAC-AAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCTTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTCACAT???????????????????????????????????????????????? Westerdykella_dispersa_GQ203798 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-ATGTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAACAAAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGCGCGTCTTCGTGCCTAG-CGGATCGGCTCCCAGAAGCTAAATCTGACAT???????????????????????????????????????????????? Westerdykella_globosa_AY943046 CATTATCGTAGAGCTTCGGCTCTTTCGAGGGAGAACCCTTTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACCTTTTTAAACCCTTGCAAT-AACCTGAAC-AAAAATCGTCTGAACAA-----AAATCGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTTTGCTTGGTATTGGGTGACTGTGGCCCCT---G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTA---CTTGGGCTTCGAGCGCAGCACATGTGCGTCCTCGGGCCTGT-TGAATCGGCTCCCAAAAGCCAAATCTCAATTGTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_multispora_AY943048 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAACGGGGACC-ATTTAAACTCTTGCAATCAACCTGAAC--AAAATCGTCTGAAC-AAA---AAAAACTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCCGCTTGGTGTTGGGTGACTGTGGCCCCTCG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCTTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTCACATTTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_multispora_GQ203799 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-TATTAAAACTCTTGCAATAACCTGTAC--A-----GTCTGAACAAAA---AAAATCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGTTGGGTGACTGTGGCCCCCTG-G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATGTGCGTCCTCGTGCCTCG-CGGATCGGCTCCCAGAAGCTAAATCTAATTT???????????????????????????????????????????????? Westerdykella_nigra_AY943049 CATTATCGTGAGGCTTCGGCCTCTTCGAGAGAAAATCC-TTGCCTTTTCAAGCACCTGTTTGTTTCCTCGGCAGCTTCGGCTGCCAATGGGGACC-TTTTAAACTCTTGTAAT-AACCTGAAC---TAATCGTCTGAATAAAA------AAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGTTGGGTGACTGTGGCCCCC---G--GGCCACTCGCCTTAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATTTGCGTCCTCGTGGCCCG-TGGATCGGCTCCCAGAAGCTATCTTTCAATT-TTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_nigra_GQ203800 CATTATCGTGAGGCTTCGGCCTCTTCGAGAGAAAATCC-TTGCCTTTTCAAGCACCTGTTTGTTTCCTCGGCAGCTTCGGCTGCCAATGGGGACC-TTTTAAACTCTTGTAAT-AACCTGAAC---TAATCGTCTGAATAAAA------AAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGTTGGGTGACTGTGGCCCCC---G--GGCCACTCGCCTTAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATTTGCGTCCTCGTGGCCCG-TGGATCGGCTCCCAGAAGCTATCTTTCAAT????????????????????????????????????????????????? Westerdykella_ornata_AY943045 CATTATCGTGGAGCTGCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACCCCTTAAAACCTTTGCAAT-AACCTGTACCGATAATCGTCTGAATAA-----AGAATCTAAATCAAAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCCCTGCTTGGTGATGGGTGACTGTGGTCCTT------GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTA---CGTAGGCTTCGAGCGCAGCACATGTGCGTCCTCGCGCCTGGTCGTATCGGCTCCCAGAAGCTAAATCTCAATTGTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_ornata_GQ203801 CATTATCGTGGAGCTGCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACCCCTTAAAACCTTTGCAAT-AACCTGTACCGATAATCGTCTGAATAA-----AGAATCTAAATCAAAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCCCTGCTTGGTGATGGGTGACTGTGGTCCTT------GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTA---CGTAGGCTTCGAGCGCAGCACATGTGCGTCCTCGCGCCTGGTCGTATCGGCTCCCAGAAGCTAAATCTCAATT???????????????????????????????????????????????? Westerdykella_purpurea_AY943050 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-CCTTTAACTCTTGCAATCAACCTGAAC--AATATCGTCTGAAT-TAA---AAAATTTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGCTGGGTGACTGTGGCCCCTCG-G--GTCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATTTGCGTCTCATCGCCCCT-CGGATCGGCTCCCAGAAGCTAAATCTCATATTTTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCA Westerdykella_purpurea_FJ624258 CATTATCGTGGAGCTTCGGCTCCTTCGAGGGAGAACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACC-CCTTAAACTCTTGCAATCAACCTGAAC--AATATCGTCTGAATTAAA---AAATTTTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGCTGGGTGACTGTGGCCCCTCG-G--GTCCACTCGCCTCAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATTTGCGTCTCATCGCCCCT-CGGATCGGCTCCCAGAAGCTAAATCTCACATTTTTGACCTCGAATCAGGTA???????????????????????????? Westerdykella_sp_AB563198 ???????????????????????TTTCGAGGGAGACCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGGCCCGCCTGCCAATGGGGACCTTTTTAAACCCTTGCGAT-AACCTGAAC-AAAAATCGTCTGAACAAAAAAAAAAATCTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACCCCTTCAAGCTTTGGTTGGAATTGGGGGACTGGGGCCCCT---G--GGCCACTCGCCTCAAAGTCATTGGCGGCCGGTA---CTTGGGCTTCGAGCGCAGCACATGTGCGTCCTCGGGCCTCT-TGAATCGGCTCCCAGAAGCTAAATCTCAATTGTTTGACCTCGAATCAGGTAGGGATACCCGAATCTCAATTGTTGACC? Westerdykella_sp_DQ468029 CATTATCGTGAGGCTTCGGCCTCTTCGAGAGAAAATCC-TTGCCTTTTCGAGCACCTGTTTGTTTCCTCGGCAGCTCCGGCTGCCAATGGGGACC-TTTTAAACTCTTGTAAT-AACCTGAAC---TAATCGTCTGAATAAAA------AAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTTACACCTTCAAGCTCTGCTTGGTGTTGGGTGACTGTGGCCCCC---G--GGCCACTCGCCTTAAAGTCATTGGCGGCCGGTT---TGTAGGCTTCGAGCGCAGCACATTTGCGTCCTCGTGGCCCG-TGGATCGGCTCCCAGAAGCTATCTTTCAATT-TTTGACCTCGGATCA???????????????????????????????? ; END; [ The following blocks are output data for analysis step 8584 ] BEGIN TREES; TITLE FNBR3_ITS; LINK TAXA = TaxaForAnalysisStep8584; TREE NJT = [&R] ((Preussia_sp_HQ130702:0.06656829,(Preussia_funiculata_AY943059:0.0,Preussia_funiculata_GU934563:0.0)1.0000:0.0259947)1.0000:0.06618924,(((Westerdykella_cylindrica_AY943056:0.01678072,Westerdykella_cylindrica_DQ491519:0.0)1.0000:0.04810588,(Westerdykella_sp_DQ468029:0.0,(Westerdykella_nigra_AY943049:0.0,Westerdykella_nigra_GQ203800:0.0)0.9100:0.00416766)1.0000:0.03836806)0.6300:0.01134915,((Westerdykella_ornata_AY943045:0.0,Westerdykella_ornata_GQ203801:0.0)1.0000:0.03421566,((Westerdykella_sp_AB563198:0.06912217,Westerdykella_globosa_AY943046:0.01593051)0.9700:0.02699301,(Westerdykella_multispora_GQ203799:0.0367465,((Westerdykella_angulata_GQ203757:0.0,Westerdykella_angulata_GQ203758:0.0)1.0000:0.05558086,((Pycnidiophora_aurantiaca_AY943057:0.0020696,Pycnidiophora_sp._FNBR3:0.00204942)0.9900:0.01790799,((Westerdykella_purpurea_AY943050:0.0061636,(Westerdykella_purpurea_FJ624258:0.00212086,Pycnidiophora_sp_GU595028:0.0)0.7400:0.00204696)1.0000:0.03170548,(Westerdykella_dispersa_DQ468016:0.0,((Westerdykella_dispersa_DQ468030:0.0,Westerdykella_dispersa_GQ203798:0.0)0.9600:0.01128819,(Pycnidiophora_dispersa_AY943055:0.0,(Westerdykella_multispora_AY943048:0.0,(Pycnidiophora_sp_FJ903343:0.0,(Westerdykella_dispersa_DQ468031:0.0,Westerdykella_dispersa_GQ203797:0.0)0.1200:0.0)0.0600:0.0)0.0500:0.0)0.4700:5.1451E-4)0.2800:0.00203751)0.7500:0.00501077)0.1900:0.00200246)0.5600:0.00340457)0.3500:0.00561059)0.1800:0.00606936)0.1400:0.00164615)0.5900:0.01608034):0.06618924); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr50954] END;