#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on November 12, 2026; 5:17 GMT TreeBASE (cc) 1994-2008 Study reference: Andújar C., Serrano J., & Gómez-zurita J. 2012. Winding up the molecular clock in the genus Carabus (Coleoptera: Carabidae): assessment of methodological decisions on rate and node age estimation. BMC Evolutionary Biology, 12: 40. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12410] [ The following blocks are input data for analysis step 8677 ] BEGIN TAXA; TITLE TaxaForAnalysisStep8677; DIMENSIONS NTAX=25; TAXLABELS Calosoma_auropunctatum_TURQ52001b Calosoma_sycophanta_CALO25405 Carabus_abbreviatus_TENE15007 Carabus_auronitens_ROMA93906 Carabus_cancellatus_ROMA94106 Carabus_cancellatus_TACHcc816 Carabus_clathratus_TURQ51901 Carabus_dufouri_ZUHE111 Carabus_famini_EURY1625 Carabus_famini_MORR54807 Carabus_irregularis_ROMA94006 Carabus_lusitanicus_VESC5 Carabus_macrocephalus_FORO157 Carabus_melancholicus_EALM42207 Carabus_melancholicus_ROBU37 Carabus_melancholicus_TIDI39104 Carabus_monilis_SAOU1538 Carabus_morbillosus_MAZA5908 Carabus_morbillosus_TUNA1622 Carabus_morbillosus_TUNB1623 Carabus_morbillosus_TUNC1624 Carabus_riffensis_KETA569 Carabus_rugosus_KSAR65807 Carabus_rugosus_SMAR43907 Carabus_rutilans_SENY1548 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M11713] TITLE HUWE1_Q_INSI_1_complete; LINK TAXA = TaxaForAnalysisStep8677; DIMENSIONS NCHAR=681; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Calosoma_auropunctatum_TURQ52001b GATATGGAGCTGGATGATACAGACGTAGCACCAAAGACCAGCACAAGTCCT-------GT--TGCGAACAACTGC--------AGCCAGAATGG-CACACGTAATATTGCTGTCGAAGGCCTCAGTGAAGAGTGCTGTGTGATAATCGTACGGACTTGCGTGAACCTGATGAAACTACCCATTGATCGAGACACACTGCATGCTGTGATGCGCATTTGCCTGAGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGAGGTGTCCGTTTGTTGTTGGAAATGACCCAAGCGTCATCCTTCACCGGATTTGTAACCCTGGCCACGTTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATCCCACCATCGCACAAAGAAATCTTATACTTGTTCAGGCAAGTCAGTTCAGCCGTTTGCCGTAATAGCGAAGCGTTCTTGGAAGTTTGCAAATCAATTTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTTATAGTTCT------------TTGTTTTT--TCTCAG----------------------TTTTATG-TTTCTTGTTTTCG-TAGATGATGAGGACGACAAACGTCTTCTG Calosoma_sycophanta_CALO25405 ???ATGGAGCTGGATGATCCAGATGTACCACCAACGATCACCATAAGTCCTGAACCAAGTCCCAGCAACAGCAGCGTGAACATAGCTGCAGCAGCCACACGTAACATTGCCGTCGAAGGTCTCAGTGAAGAGTGCTGTGTGATAATCGTACGGACTTGCGTGAACCTGATGAAACTACCCATTGATCGGGATACACTGCATGCTGTGATGCGTATTTGCCTGAGACTTACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGTGTCCGTTTGTTGTTGGAAATGACCCAGGCGTCATCCTTCACCGGATTTGTAACCCTGGCCACGTTGTTGATCCGTCACGTGATTGAAGAACCACAGACCCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATCCCGCCATCGCACAAAGAGATCTTATACTTGTTCAGACAAGTCAGTTCAGCCGTCTGCCGTAATCCCGAAGCGTTCTTGGAAGTTTGCAAATCAATTTTGCGCATTGACATTAGCGCTTTGCACAGACGAAGCAGTAAGT-ATTGATTTTATAGTTCT------------TTGTTTTTT-TTTCAA-TT---ATAGCAAGTGATTAA-TTCTATG-TTTCTTGTTTTCG-TAGATGAAGAGGATGACAAACGTCTTCTG Carabus_abbreviatus_TENE15007 GATATGGAGCTGGACGATCCAGATGTGCCACCAAAAACCAGCACCAGTCCT-------GT--TGCAAACACTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAATCTGATGAAACTACCCATTGATAGAGACACTCTGCACGCTGTGATGCGTATTTGTCTGCGACTTACACGTGACTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTATTGGAAATGACGCAAGCATCGTCTTTTACTGGATTTGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAAACTCTATGTTTGGCTATCGAGAAAGTTATCCGAGGCCGTGCCTTGAACACAATACCACCATCACACAAAGAAATCCTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCTGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCTTTGCATAGACGTAGCAGTAAGT-ATTGATTTT-CTGTTTT-------AT-AGTTATTTGTT-TGCCTG-TTTGCCTAGCAAGTCATTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_auronitens_ROMA93906 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGTCCT-------GT--TGCGAACAGCGGC--------AACCAGAACGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATACGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-A-----TTT-TTTTTTT-------AT-AGTTATTTGTT-TGCCAA-TT---GTAGCAAGTGATTAA-TTTGATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_cancellatus_ROMA94106 GATATGGAGCTGGACGATCCTGAAGTAGCACCGAAAACCAGCACAAGTCCT-------GT--TGCAACCAGTGGC--------AACCAGAATGG-TACACGTAACATTGCTGTTGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATCGAGACACGCTGCACGCGGTGATGCGTATTTGTCTGCGACTTACACGTGATTTCCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTTCGTTTGTTGCTGGAAATGACCCAAGCATCTTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGCCACGTAATTGAAGAACCGCAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGTGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGTTATTGATTTG-TTGTTT-----------------------TGTCAA-TT---GTAGCAAGTGATTAA-TTCTATGTTT-----TTATAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_cancellatus_TACHcc816 GATATGGAGCTGGACGATCCAGACATGCCACCAAAATCCAGTACGAGTCCA-------GT--TGCGAACAGTTTC--------AATCCGAACTG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAACCTGATGAAGTTACCCATTGATCGAGACACATTGCATGCTGTGATGCGTATTTGTCTGCGACTCACACGGGATTTCCGCTGTGCTAGAATATTTGCAGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACCCAAGCATCGTCTTTCACCGGATTTGTGACACTGGCCACATTGTTGATCCGTCACGTGATTGAAGAACCCCAAACACTATGTTTAGCCATCGAAAAGGTTATCCGAGGTCGCGCCTTAAACACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGATGCATTCTTGGAGGTTTGCAGAGCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGTAGCAGTAAGT-ATTGATTTTGTTTGTTTGTTTTATAT-TGTTATTTGTTTTGCCAG-TT---GTAACAAGTGATTAA-TTTTATG-TG-----TTATAATTAGATGAAGAGGATGACAAACGTCTTCTG Carabus_clathratus_TURQ51901 GATATGGAGCTGGACGATCCAGACGTAGCACCAAAAACCAGCACAAGTCCT-------GT--TGCGAACAGTACG--------GTACAGAACGG-TACACGTAACATTGCAGTCGAAGGCCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGCATTTGTCTGAGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCCGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCCACATTGTTAATCCGTCACGTGATTGAGGAACCACAAACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAGATCTTATACTTATTCAGACAAGTCAGTTCAGCCGTTTGCCGAAATCCCGAAGCATTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGA--------TTTT-------AG-AGTTATTTGTT-TGCCAG-TT---GTAGCAAGTGATTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_dufouri_ZUHE111 GATATGGAGCTGGACGATCCAGATGTACCACCAAAAACCAGCACAAGTCTT-------GT--TGCGAACACTTGC--------AACCAGAACGG-AACACGTAACGTTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACTCTGGCTACATTGTTAATCCGCCATGTGATTGAAGAACCACAGACTCTCTGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-TTGTTTT-------AT-AATTATTTGTT-TGCCAG-TT---GTAGCAAGTGATTAA-TTTTATG-TT-----TTTTAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_famini_EURY1625 ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????CGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAACTACCCATTGATCGAGACACACTTCACGCTGTGATGCGCATTTGTCTGCGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGAGGCGTCCGTTTGTTGTTGGAAATGACGCAAGCATCGTCATTCACCGGATTCGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAAACTCTGTGTTTGGCCATCGAGAAGGTAATCCGAGGCCGTGCCTTGAACACAATTCCACCATCACACAAAGAAATCCTGTACTTGTTCCGACAAGTCAGTTCAGCTGTTTGCCGAAATCCTGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTACCGCTTTACATAGACGAAGCAGTAAGT-ATTGGTTTT-CTGTTTT-------AT-AGTTATTTGTT-TGCCTG-TT---GTAGCAAGTGATTAA-TTTTATG-TT-----TTGTAA-TAGATGAGGAGGACGACAAACGTCTTCTG Carabus_famini_MORR54807 GATATGGAGCTGGACGATCCAGATGTGCCACCAAAAACCAGCACAAGTCCT-------GT--TGCAACCACTCTC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAACTACCCATTGATAGAGACACACTGCATGCTGTGATGCGCATTTGTCTGCGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAAACTCTGTGTTTGGCCATCGAGAAGGTAATCCGAGGCCGTGCCTTGAACACAATACCACCATCACACAAAGAAATCCTGTACTTGTTCCGACAAGTCAGTTCAGCTGTTTGCCGAAATCCTGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-CTGTTTT-------AT-AGTTATTTGTT-TGCCTG-TT---GTAGTAAGTGATTAA-TTTTATG-TT-----TT{AG}TAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_irregularis_ROMA94006 GATATGGAGCTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGTCCG-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCCGTCGAAGGCCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATTAAGTTACCCATTGACAGAGACACACTGCACGCTGTGATGCGCATTTGCCTGAGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGATTTGTAACGCTGGCCACATTGTTAATCCGTCACGTGATTGAAGAACCTCAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCCGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGA--------TTTT-------AT-AGTTATTTGTT-TGCCAG-TT---GTAGCATTTGATTAA-ATTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_lusitanicus_VESC5 GATATGGAGCTGGACGATCCAGATGTACCACCAAAAACCAGCACAAGTCCT-------GT--TGCGACCACTTGC--------AACCAGAACGG-AACACGTAACGTTGCTGTCGAAGGCCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTTCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACGCAAGCGTCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGCCACGTGATTGAAGAACCACAGACTCTCTGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-CTGTTTT-------AT-AATTATTTGTTTTGCGAG-TT---GTAGCAAGTGATTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_macrocephalus_FORO157 ??????GAGCTGGACGATCCAGATGTACCACCAAAAACCAGCACAAGTCCT-------GT--TGCGACCACTTGC--------AACCAGAACGG-AACACGTAACGTTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGCCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-CTGTTTT-------AT-AATTATTTGTT-TGCCAG-TT---GTAGCAAGTGATTAA-TTTTATG-TT-----TTATTA-TAGATGAAGAGGACGACAAACGTCTTC?? Carabus_melancholicus_EALM42207 GATATGGAGCTGGACGATCCGGACGTGCCACCAAAAACCAGCACAAGTCCT-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTGCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTGTGTTTAGCCATCGAGAAGGTTATTCGCGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-TTGTTTT-------AC-AGTTATTTGTT-TGCCAA-TT---GTAGCAAGTGATTAA-TTTTATA-TT-----TTATGA-TAGATGAAGAAGACGACAAACGTCTTCTG Carabus_melancholicus_ROBU37 GATATGGAGCTGGACGATCCGGACGTGCCACCAAAAACCAGCACAAGTCCT-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGTATTTGTCTGCGACTTACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTGCGTTTGTTGTTGGAAATGACACAAGCGTCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCATGTGATTGAAGAACCACAGACTCTGTGTTTAGCCATCGAGAAGGTTATCCGCGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-TTGTTTT-------AC-AGTTATTTGTT-TGCCAA-TT---ATAGCAAGTGATTAA-TTTTATA-TT-----TTATGA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_melancholicus_TIDI39104 GATATGGAGCTGGACGATCCGGACGTGCCACCAAAAACCAGTACAAGTCCT-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTGCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTGTGTTTAGCCATCGAGAAGGTTATTCGCGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-TTGTTTT-------AC-AGTTATTTGTT-TGCCAA-TT---GTAGCAAGTGATTAA-TTTTATA-TT-----TTATGA-TAGATGAAGAAGACGACAAACGTCTTCTG Carabus_monilis_SAOU1538 GATATGGAGCTGGACGACCCTGATGTAGCACCGAAAACCAGCACAAGTCCG-------GT--TGCGAACAGCGGC--------AACCAGAACGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATTATCGTACGGACCTGCGTGAACCTGATGAAGTTACCGATTGATCGAGACACATTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAGCAGGGTGGCGTTCGTTTGTTACTGGAAATGACCCAAGCATCTTCATTTACCGGTTTTGTCACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGATATTAGCGCATTGCACAGAAGAAGCAGTAAGT-ATTGATTTTGTTGTTTT-------ATAAGTTATTTGTT-TGCCAGTTT---ATAGCAAGTGATTAA-ATT---GTTT-----TATAAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_morbillosus_MAZA5908 GATATGGAACTGGATGATCCAGATGTAGCACCGAAAACCAGCACAATTCCT-------GT--TGCGACCAGCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-A----------TTTTTT-------AT-AGTTACTTGTT-TGCCAA-TT---GTAGCAAGTGTTTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_morbillosus_TUNA1622 GATATGGAACTGGATGATCCAGATGTACCACCGAAAACCAGCACAATTCCT-------GT--TGCGACCACCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGCGTTCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTAGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTCTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-A------------TTTT-------TT-AGTTATTTGTT-TGCGAA-TT---GTAGCAAGTGTTTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACG-CTTCTG Carabus_morbillosus_TUNB1623 GATATGGAACTGGATGATCCAGATGTAGCACCGAAAACCAGCACAATTCCT-------GT--TGCGACCACCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGTGTCCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTAGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-A----------TTTTTT-------AT-AGTTATTTGTT-TGCCAA-TT---GTAGCAAGTGTTTAATTTTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_morbillosus_TUNC1624 ???????????????????????????????????????????????????????????????????????????????????????????????????????????????GTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGTGTCCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTAGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-A---------TTTTTTT-------AT-AGTTATTTGTT-TGCCAA-TT---GTAGCAAGTGTTTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_riffensis_KETA569 GATATGGAGCTGGATGATCCAGATGTACCACCAAAAACCAGCACAAGTCCC-------GT--TGCGAACACTTGC--------AACCAGAATGG-AACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGAACCTGTGTGAACCTGATGAAGCTACCCATTGACAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCCAGAATATTCGCGGAACAAGGTGGCGTCCGTTTGTTGCTTGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCGCCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTGTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT-ATTGATTTT-TCTGTGT-----------TTTATTTGTT-TGCCAG-TT---GTAGCAAGTGATTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGACAAACGTCTTCTG Carabus_rugosus_KSAR65807 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGCCCT-------GT--TGCGAACAGCGGC--------AACCAGAACGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGCCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGCATTGACATAAGCGCATTGCATAGACGAAGCAGTAAGT-A---------TTTGTTT-------AT-AGTTATTTGTT-TGCCAA-AT---GTAGCAAGTGTTTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_rugosus_SMAR43907 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGCCCT-------GT--TGCGAACAGCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGCCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGCATTGACATAAGCGCATTGCATAGACGAAGCAGTAAGT-A---------TTTGTTT-------AT-AGTTATTTGTT-TGCCAA-AT---GTAGCAAGTGTTTAA-TTTTATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG Carabus_rutilans_SENY1548 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGTCCT-------GT--TGCGAACAGCGGC--------AACCAGAACAG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGCGTGATAATCGTACGCACCTGTGTGAACTTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTGTGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTAAATACAATACCACCATCGCACAAGGAAATCTTGTACTTATTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT-A-------T-TTCTTTT-------AT-AGTTATTTGTT-TGCCAA-TG---GTAGCAAGTGATTAA-TTTGATG-TT-----TTATAA-TAGATGAAGAGGACGATAAACGTCTTCTG ; END; [ The following blocks are output data for analysis step 8677 ] BEGIN TREES; TITLE 'HUWE1_Q_INSI_1_complete_ULN.(time).con'; LINK TAXA = TaxaForAnalysisStep8677; TREE HUWE1_Q_INSI_1_complete_ULN = [&R] ((((Calosoma_auropunctatum_TURQ52001b:8.549636729550002,Calosoma_sycophanta_CALO25405:8.549636729550002):7.78402034534545,Carabus_clathratus_TURQ51901:16.333657074895452):1.2753299220735457,Carabus_irregularis_ROMA94006:17.608986996968998):10.488795460887001,(((((((Carabus_morbillosus_MAZA5908:3.4820989204779984,(Carabus_morbillosus_TUNC1624:2.019157702453697,(Carabus_morbillosus_TUNB1623:1.2125575483451954,Carabus_morbillosus_TUNA1622:1.2125575483452025):0.8066001541084944):1.4629412180243015):3.710310686778403,(Carabus_rugosus_KSAR65807:0.7340897096405996,Carabus_rugosus_SMAR43907:0.7340897096405996):6.458319897615802):1.541833575475298,(Carabus_auronitens_ROMA93906:5.480257189316998,Carabus_rutilans_SENY1548:5.480257189316998):3.2539859934147017):2.7110359749773014,Carabus_monilis_SAOU1538:11.445279157709):4.655525247566748,Carabus_cancellatus_ROMA94106:16.10080440527575):4.061402613204546,(Carabus_cancellatus_TACHcc816:15.145512526624998,((Carabus_melancholicus_TIDI39104:0.7093435529460077,Carabus_melancholicus_EALM42207:0.7093435529460077):2.7404515509799996,Carabus_melancholicus_ROBU37:3.449795103926):11.695717422698998):5.016694491855297):2.2445926864957073,(((Carabus_famini_MORR54807:5.217431614634002,Carabus_famini_EURY1625:5.217431614634002):4.224822124416999,Carabus_abbreviatus_TENE15007:9.442253739051):6.116405645966001,((Carabus_dufouri_ZUHE111:5.543868960798999,(Carabus_lusitanicus_VESC5:2.555362831636552,Carabus_macrocephalus_FORO157:2.555362831636552):2.988506129162447):5.049842209850501,Carabus_riffensis_KETA569:10.5937111706495):4.964948214367501):6.8481403199590005):5.6909827528799966); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr51100] END;