#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 21, 2025; 6:26 GMT TreeBASE (cc) 1994-2008 Study reference: Romon P., De beer Z.W., Zhou X., Duong T., Wingfield B.D., & Wingfield M.J. 2013. Multigene phylogenies of Ophiostomataceae ascomycetes associated with Monterey pine bark beetles in Spain reveal three new fungal species. , . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12569] [ The following blocks are input data for analysis step 8925 ] BEGIN TAXA; TITLE TaxaForAnalysisStep8925; DIMENSIONS NTAX=25; TAXLABELS Ophiostoma_abietinum_HM067820_T Ophiostoma_cf_abietinum_AY280468_CANADA Ophiostoma_cf_abietinum_AY280469_USA Ophiostoma_cf_abietinum_AY280470_USA Ophiostoma_cf_abietinum_CMW397_SA Ophiostoma_cf_abietinum_DQ865287_CANADA Ophiostoma_cf_abietinum_EU785433_CHINA Ophiostoma_cf_abietinum_EU785434_CHINA Ophiostoma_cf_abietinum_HM031568_RUSSIA Ophiostoma_euskadiensis_CMW27318_SPAIN Ophiostoma_euskadiensis_CMW27898_SPAIN Ophiostoma_euskadiensis_CMW27899_SPAIN Ophiostoma_fusiforme_AY280461_AZERBAIJAN Ophiostoma_fusiforme_AY280462_AZERBAIJAN Ophiostoma_fusiforme_AY280463_AZERBAIJAN Ophiostoma_fusiforme_AY280464_AUSTRIA Ophiostoma_fusiforme_AY280465_AUSTRIA Ophiostoma_lunatum_AY280466_AUSTRIA Ophiostoma_lunatum_AY280467_AUSTRIA Ophiostoma_stenoceras Ophiostoma_stenoceras_DQ296074_T Sporothrix_sp_1_CMW9488_MEXICO Sporothrix_sp_1_CMW9491_MEXICO Sporothrix_sp_2_CMW9487_MEXICO Sporothrix_sp_2_CMW9489_MEXICO ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M12185] TITLE BT; LINK TAXA = TaxaForAnalysisStep8925; DIMENSIONS NCHAR=242; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=- GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 ] [ . . . . . . . . . . . . . . . . . . . . . . . . ] Ophiostoma_abietinum_HM067820_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAATGTGAAAACGATGT----GAATAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_AY280468_CANADA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_AY280469_USA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAACCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_AY280470_USA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAACCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_CMW397_SA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAACCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_DQ865287_CANADA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_EU785433_CHINA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCCGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CGTTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_EU785434_CHINA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCCGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CGTTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_cf_abietinum_HM031568_RUSSIA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTTCTGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_euskadiensis_CMW27318_SPAIN CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACTCAGTTTGAAAACGATGT----GAACAGCTTCCTAACATTGTGCATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTC-TCGG Ophiostoma_euskadiensis_CMW27898_SPAIN CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACTCAGTTTGAAAACGATGT----GAACAGCTTCCTAACATTGTGCATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTC-TCGG Ophiostoma_euskadiensis_CMW27899_SPAIN CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACTCAGTTTGAAAACGATGT----GAACAGCTTCCTAACATTGTGCATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTC-TCGG Ophiostoma_fusiforme_AY280461_AZERBAIJAN CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCGGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_fusiforme_AY280462_AZERBAIJAN CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCGGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_fusiforme_AY280463_AZERBAIJAN CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCGGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_fusiforme_AY280464_AUSTRIA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_fusiforme_AY280465_AUSTRIA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_lunatum_AY280466_AUSTRIA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_lunatum_AY280467_AUSTRIA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATAT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_stenoceras CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTACTAACGCCTCCATGACTATATTATATTCTAGGAGAGTGACACTA-------ACAACTGTAGGCCTCCGGTAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGCACCATGGACGCCGTCCGTGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAATTTCGTCTTCGG Ophiostoma_stenoceras_DQ296074_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTACTAACGCCTCCATGACTATATTATATTCTAGGAGAGTGACACTA-------ACAACTGTAGGCCTCCGGTAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGCACCATGGACGCCGTCCGTGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAATTTCGTCTTCGG Sporothrix_sp_1_CMW9488_MEXICO CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCTAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_sp_1_CMW9491_MEXICO CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCTAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAA-------CATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_sp_2_CMW9487_MEXICO CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAACATTGTGCATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_sp_2_CMW9489_MEXICO CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGTCAGTCCAGCCCACCCAGTGTGAAAACGATGT----GAACAGCTTCCTAACATTGTGCATTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG ; END; [ The following blocks are output data for analysis step 8925 ] BEGIN TREES; TITLE BT; LINK TAXA = TaxaForAnalysisStep8925; TREE PAUP_1 = [&R] ((Ophiostoma_stenoceras_DQ296074_T:0.0,Ophiostoma_stenoceras:0.0):15.5,(Ophiostoma_cf_abietinum_HM031568_RUSSIA:1.0,((Ophiostoma_fusiforme_AY280464_AUSTRIA:0.0,Ophiostoma_fusiforme_AY280465_AUSTRIA:0.0,Ophiostoma_lunatum_AY280466_AUSTRIA:0.0,Ophiostoma_lunatum_AY280467_AUSTRIA:0.0,(Ophiostoma_fusiforme_AY280462_AZERBAIJAN:0.0,Ophiostoma_fusiforme_AY280461_AZERBAIJAN:0.0,Ophiostoma_fusiforme_AY280463_AZERBAIJAN:0.0):1.0):1.0,(Ophiostoma_cf_abietinum_AY280468_CANADA:0.0,Ophiostoma_cf_abietinum_DQ865287_CANADA:0.0,Ophiostoma_abietinum_HM067820_T:2.0,Sporothrix_sp_2_CMW9487_MEXICO:0.0,Sporothrix_sp_2_CMW9489_MEXICO:0.0,(Ophiostoma_cf_abietinum_EU785433_CHINA:0.0,Ophiostoma_cf_abietinum_EU785434_CHINA:0.0):2.0,(Sporothrix_sp_1_CMW9488_MEXICO:0.0,Sporothrix_sp_1_CMW9491_MEXICO:0.0):1.0,(Ophiostoma_euskadiensis_CMW27318_SPAIN:0.0,Ophiostoma_euskadiensis_CMW27898_SPAIN:0.0,Ophiostoma_euskadiensis_CMW27899_SPAIN:0.0):2.0,(Ophiostoma_cf_abietinum_AY280470_USA:0.0,Ophiostoma_cf_abietinum_AY280469_USA:0.0,Ophiostoma_cf_abietinum_CMW397_SA:0.0):1.0):1.0):2.0):15.5); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr52078] END;