#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 10, 2024; 5:43 GMT TreeBASE (cc) 1994-2008 Study reference: Billones-baaijens R., Ridgway H.J., Jones E.E., Cruickshank R.H., & Jaspers M.V. 2012. Prevalence and distribution of Botryosphaeriaceae species in New Zealand grapevine nurseries. European Journal of Plant Pathology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S13227] [ The following blocks are input data for analysis step 9911 ] BEGIN TAXA; TITLE TaxaForAnalysisStep9911; DIMENSIONS NTAX=48; TAXLABELS Botryosphaeria_dothidea_AY236950.1 Botryosphaeria_dothidea_AY343415.1 Botryosphaeria_dothidea_DQ233603.1 Botryosphaeria_dothidea_EU650670.1 Botryosphaeria_dothidea_NZ_D07 Diplodia_mutila_EF445346.1 Diplodia_mutila_FJ481586.1 Diplodia_mutila_GU251118.1 Diplodia_mutila_GU251119.1 Diplodia_mutila_NZ_S103 Diplodia_seriata_AY236954.1 Diplodia_seriata_AY343437.1 Diplodia_seriata_AY343460.1 Diplodia_seriata_DQ356356.1 Diplodia_seriata_NZ_O99 Fusicoccum_macroclavatum_DQ093196.1 Fusicoccum_macroclavatum_DQ093197.1 Fusicoccum_macroclavatum_DQ093198.1 Fusicoccum_macroclavatum_NZ_M353 Guignardia_philoprina_FJ824768.1 Neofusicoccum_australe_AY343412.1 Neofusicoccum_australe_DQ093201.1 Neofusicoccum_australe_DQ233610.1 Neofusicoccum_australe_GQ857662.1 Neofusicoccum_australe_NZ_A088 Neofusicoccum_luteum_AY236946.1 Neofusicoccum_luteum_DQ233608.1 Neofusicoccum_luteum_EU650669.1 Neofusicoccum_luteum_HQ197352.1 Neofusicoccum_luteum_NZ_L067 Neofusicoccum_luteum_NZ_L106 Neofusicoccum_luteum_NZ_L228 Neofusicoccum_luteum_NZ_L864 Neofusicoccum_parvum_AY206460.2 Neofusicoccum_parvum_AY236945.1 Neofusicoccum_parvum_AY259098.2 Neofusicoccum_parvum_AY343477.1 Neofusicoccum_parvum_DQ356359.1 Neofusicoccum_parvum_NZ_P069 Neofusicoccum_parvum_NZ_P072 Neofusicoccum_parvum_NZ_P116 Neofusicoccum_parvum_NZ_P471 Neofusicoccum_ribis_AY236936.1 Neofusicoccum_ribis_AY744368.1 Neofusicoccum_ribis_DQ316080.1 Neofusicoccum_ribis_GU199384.1 Neofusicoccum_ribis_NZ_R83a Neofusicoccum_ribis_NZ_R83b ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M13998] TITLE rDNA_sequence_analysis_of_Botryosphaeriaceae_species; LINK TAXA = TaxaForAnalysisStep9911; DIMENSIONS NCHAR=665; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Botryosphaeria_dothidea_AY236950.1 --------------------------------------------------------------AGGATCATTACCG-AGTTGATTCGGGCTCCGGCCCGATCCT-CCCACCCTTTGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCGGCCGCCCCCCT-----------CCCCGGGGGGGTGGCCA-GCGCCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTC-TGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCTTT--GCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Botryosphaeria_dothidea_AY343415.1 ---------------------------------------------------------------GGATCATTACCG-AGTTGATTCGGGCTCCGGCCCGATCCT-CCCACCCTTTGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCGGCCGGCCCCCC-----------TCCCCGGGGGGTGGCCA-GCGCCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTC-TGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCTTT--GCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Botryosphaeria_dothidea_DQ233603.1 ----------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGGGCTCCGGCCCGATCCT-CCCACCCTTTGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCGGCCGGCCCCCC-----------TCCCCGGGGGGTGGCCA-GCGCCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTC-TGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCTTT--GCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA------------------------ Botryosphaeria_dothidea_EU650670.1 ------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGGGCTCCGGCCCGATCCT-CCCACCCTTTGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCGGCCGGCCCCCC-----------TCCCCGGGGGGTGGCCA-GCGCCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTC-TGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCTTT--GCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA---- Botryosphaeria_dothidea_NZ_D07 --------------TAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGGGCTCCGGCCCGATCCT-CCCACCCTTTGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCGGCCGCCCCCCT-----------CCCCGGGGGGGTGGCCA-GCGCCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTC-TGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCTTT--GCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Diplodia_mutila_EF445346.1 -------------------------------------------------------------AAGGATCATTACCG-AGTT--CTCGGGCTTCGGCCCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------T-GCCG--CGTGGAGG--CCCTC-----------AAAAGCCCCCCCGCGCG-CTT-CCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGTGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA------------------------ Diplodia_mutila_FJ481586.1 -------------------------------------------------------------AAGGATCATTACCG-AGTT--CTCGGGCTTCGGCCCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------T-GCCG--CGTGGAGG--CCCTC-----------AAAAGCCCCCCCGCGCG-CTT-CCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGTGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA------------------------ Diplodia_mutila_GU251118.1 -------------------------------------------------------------------CATTACCG-AGTT--CTCGGGCTTCGGCCCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------T-GCCG--CGTGGAGG--CCCTC-----------AAAAGCCCCCCCGCGCG-CTT-CCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGTGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGG-------------------------------------------------------------- Diplodia_mutila_GU251119.1 -------------------------------------------------------------------CATTACCG-AGTT--CTCGGGCTTCGGCCCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------T-GCCG--CGTGGAGG--CCCTC-----------AAAAGCCCCCCCGCGCG-CTT-CCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGTGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGG-------------------------------------------------------------- Diplodia_mutila_NZ_S103 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCG-CTT-CCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGA---------------------------------------------------------- Diplodia_seriata_AY236954.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTT--CTCGGGCTTCGGCTCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------TTGCCG--CGAGGAGG--CCCTC-----------GCGGGCCCCCCCGCGCG-CTTTCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Diplodia_seriata_AY343437.1 ---------------------------------------------------------------GGATCATTACCG-AGTT--CTCGGGCTTCGGCTCGACTCT-CCCACCCTTTGTGA-ACGTACCTCTGTTGCTTTGGCGGCTCT---------TTGCCG--CGAGGAGG--CCCTC-----------GCGGGCCCCCCCGCGCG-CTTTCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Diplodia_seriata_AY343460.1 ---------------------------------------------------------------GGATCATTACCG-AGTT--CTCGGGCTTCGGCTCGAATCT-CCCACCCTTTGTGA-ACGTACCTCTGTTGCTTTGGCGGCTCT---------TTGCCG--CGAGGAGG--CCCTC-----------GCGGGCCCCCCCGCGCG-CTTTCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Diplodia_seriata_DQ356356.1 ---------------------------------------GTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTT--CTCGGGCTTCGGCTCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------TTGCCG--CGAGGAGG--CCCTC-----------GCGGGCCCCCCCGCGCG-CTTTCTGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AACTTTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA------------------------ Diplodia_seriata_NZ_O99 ---------------AGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTT--CTCGGGCTTCGGCTCGAATCT-CCCACCCTTTGTGA-ACATACCTCTGTTGCTTTGGCGGCTCT---------TTGCCG--CGAGGAGG--CCCTC-----------GCGGGCCCCCCCGCGCG-CTTTCTGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTC-TGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAA--TACACCTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGA---ACCTTCTG--AAC-------------------------------------------------------------------------- Fusicoccum_macroclavatum_DQ093196.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CCCCC-----------TTCGGGGG--CTGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTGAACTTCGCAGCC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGCCGCCCGCCGGACGA---ACCTTTGA--ATT-TTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Fusicoccum_macroclavatum_DQ093197.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCAGGCTCCGGCTCGACTCT-CCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CCCCC-----------TTCGGGGG--CTGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTGAACTTCGCAGCC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTATGCTTGGTATTGGGCTCCGTCCTCT--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGCCGCCCGCCGGACGA---ACCTTTGA--ATT-TTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Fusicoccum_macroclavatum_DQ093198.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CCCCC-----------TTCGGGGG--CTGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTGAACTTCGCAGCC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGCCGCCCGCCGGACGA---ACCTTTGA--ATT-TTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Fusicoccum_macroclavatum_NZ_M353 ---TTTTTGGTCCTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGT-GATTCGAGCTCCGGCTCGACTCTTCCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCCCCCG--CCCCC-----------TTCGGGGG--CTGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTGAACTTCGCAGCC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGCCGCCCGCCGGACGA---ACCTTTGA--ATT-TTTCTC-AAGGT-GACCTCGATCAGGTAGGATCCT-------------------------------------- Guignardia_philoprina_FJ824768.1 TCCGTAGGTGAACCTGCGGAAGGATCATTACTGAACTAGTAATTCTCTGAAAGGTCGCCGTAGGGGGCCCCCCCTAAACAA---GGGGCCCCCGAAGGTCCTCTCACACCCT-TGTGT-ACCTTACCACGTTGCTTTGGCGGGCCGACCCGGTTTCGACCCGGGCGGCCGGCGCCCCCAGCCCTCCAGGGCCAGGACGTCAGGCCAAGCGCCCGCCAGTAAAC---AAAACTCCAGCGATTATTTCATGCGGTCCTGATAAATTATTCAATTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGATTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCGCTG-CCGGACGCGCCTCGAAGACCTCGGCGACGGCGTCCCAG-CCTCGAGCGTAGTAGTA-AAATATCTCGCTCTGGAGTGCTGGGCGTTGGCCGCCGGACAACCGACCTTCGGTCACTATTTTTCCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA---- Neofusicoccum_australe_AY343412.1 ---------------------------------------------------------------GGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGG-CCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_australe_DQ093201.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGG-CCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_australe_DQ233610.1 ----------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTT--TTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGG-CCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTTTCTC-AAGGTTGACCTCGGATCAGGTAGGG--ATACCCGCTGAACTTAA---------------------- Neofusicoccum_australe_GQ857662.1 ---------------TTGAAGTTTAAAAATCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCGGAGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGG-CCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--GCGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGATCAGGTAGGGCCATACCCGCTGAACTTAAGCATATCAATAGGCCGGAGGAA Neofusicoccum_australe_NZ_A088 --------------TAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGG-CCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--GCGGACGCGCCTCGAAGACCTCGGTGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGAC--------------------------------------------------------- Neofusicoccum_luteum_AY236946.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_luteum_DQ233608.1 ----------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGATCAGGTAGGG--ATACCCGCTGAACTTAA---------------------- Neofusicoccum_luteum_EU650669.1 ------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGATCAGGTAGGG--ATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA-- Neofusicoccum_luteum_HQ197352.1 ------------------------------------------------------------GAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACC----------------------------------------------------------------------------------------------------------------------------- Neofusicoccum_luteum_NZ_L067 --------------TAGAGGAAGTAAAAAT-GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGTTACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGAC--------------------------------------------------------- Neofusicoccum_luteum_NZ_L106 -----------------AGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_luteum_NZ_L228 -----------------------------------------------------------------------------------------------------------CCCCCATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTG-------------------------------------------------------------------------------- Neofusicoccum_luteum_NZ_L864 -------------------------------GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCCATGTGTTACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGA--CCCCC-----------GTTCGGGGGGCCGGCCA-GCGCCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCT--GTGGACGCGCCTCGAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTTTT-CTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_parvum_AY206460.2 -----------------------------------------------------------------------------------TCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTAGGGA---------------------------------------- Neofusicoccum_parvum_AY236945.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_parvum_AY259098.2 ------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGAGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA---- Neofusicoccum_parvum_AY343477.1 ---------------------------------------------------------------GGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_parvum_DQ356359.1 ---------------------------------------GTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA------------------------ Neofusicoccum_parvum_NZ_P069 ----------------------------GTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_parvum_NZ_P072 ---------------AGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_parvum_NZ_P116 ------------AATAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_parvum_NZ_P471 ----------------GAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA-CCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_ribis_AY236936.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGGGCTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_ribis_AY744368.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGGGCTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_ribis_DQ316080.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTTGCAGTC-TGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_ribis_GU199384.1 -----------------------------------------------------------GGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGAT-------------------------------------------------- Neofusicoccum_ribis_NZ_R83a ----------------GAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA-CCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCTATGTGT-ACCTACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATTTCTC-AAGGTTGACCTCGGATCAGGTA-------------------------------------------- Neofusicoccum_ribis_NZ_R83b TCTTTGGTCCAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCG-AGTTGATTCGAGCTCCGGCTCGACTCT-CCCACCCAATGTGT-ACCCACCTCTGTTGCTTTGGCGGGCCG---------CGGTCCTCCGCACCGG--CGCCC-----------TTCGGGGGG-CTGGCCA-GCGCCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTC-TGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCC--ACGGACGCGCCTTAAAGACCTCGGCGGTGGCGTCTTG--CCTCAAGCGTAGTAGAA--AACACCTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGA---ACCTTTGA--ATTATT-CTC-AAGGT-GACCTCG-ATCAGGTACGATCC-------------------------------------- ; END; [ The following blocks are output data for analysis step 9911 ] BEGIN TREES; TITLE NJ_of_rDNA_sequence; LINK TAXA = TaxaForAnalysisStep9911; TREE Fig._2 = [&R] ((((((((((((((Neofusicoccum_parvum_AY206460.2:0.0,Neofusicoccum_parvum_AY343477.1:0.0):0.0,Neofusicoccum_ribis_NZ_R83a:0.0):0.0,Neofusicoccum_parvum_NZ_P471:0.0):0.0,Neofusicoccum_parvum_NZ_P116:0.0):0.0,Neofusicoccum_parvum_NZ_P072:0.0):0.0,Neofusicoccum_parvum_NZ_P069:0.0):0.0,Neofusicoccum_parvum_DQ356359.1:0.0):0.0,(Neofusicoccum_parvum_AY259098.2:0.0,Neofusicoccum_parvum_AY236945.1:0.0):0.0):0.00290993,(Neofusicoccum_ribis_NZ_R83b:0.0,(Neofusicoccum_ribis_AY236936.1:0.0,(Neofusicoccum_ribis_GU199384.1:0.0,Neofusicoccum_ribis_AY744368.1:0.0):0.0):0.0):1.6407E-4):0.00110245,Neofusicoccum_ribis_DQ316080.1:0.00516985):0.00860693,(Fusicoccum_macroclavatum_DQ093196.1:-2.792E-5,(Fusicoccum_macroclavatum_DQ093198.1:-5.273E-5,(Fusicoccum_macroclavatum_DQ093197.1:0.00318624,Fusicoccum_macroclavatum_NZ_M353:-9.991E-5):5.273E-5):2.792E-5):0.00617071):0.00415692,(((((Neofusicoccum_australe_NZ_A088:0.00313796,Neofusicoccum_australe_GQ857662.1:-6.395E-5):3.337E-5,Neofusicoccum_australe_AY343412.1:-3.337E-5):1.744E-5,Neofusicoccum_australe_DQ093201.1:-1.744E-5):9.14E-6,Neofusicoccum_australe_DQ233610.1:-9.14E-6):6.7375E-4,(Neofusicoccum_luteum_EU650669.1:0.0,(Neofusicoccum_luteum_HQ197352.1:0.0,(Neofusicoccum_luteum_AY236946.1:0.0,(Neofusicoccum_luteum_DQ233608.1:0.0,(Neofusicoccum_luteum_NZ_L067:0.0,(Neofusicoccum_luteum_NZ_L106:0.0,(Neofusicoccum_luteum_NZ_L228:0.0,Neofusicoccum_luteum_NZ_L864:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.00548869):0.00489539):0.00879218,(((((Diplodia_mutila_GU251118.1:0.0,Diplodia_mutila_NZ_S103:0.0):0.0,Diplodia_mutila_EF445346.1:0.0):0.0,Diplodia_mutila_GU251119.1:0.0):0.0,Diplodia_mutila_FJ481586.1:0.0):0.00106443,(Diplodia_seriata_AY236954.1:-7.261E-5,(Diplodia_seriata_AY343460.1:-1.4192E-4,(Diplodia_seriata_AY343437.1:-2.7753E-4,(Diplodia_seriata_NZ_O99:0.0,Diplodia_seriata_DQ356356.1:0.0):0.00335153):1.4192E-4):7.261E-5):0.01140225):0.05393575):0.00520323,(Botryosphaeria_dothidea_EU650670.1:0.0,(Botryosphaeria_dothidea_AY236950.1:0.0,(Botryosphaeria_dothidea_DQ233603.1:0.0,(Botryosphaeria_dothidea_AY343415.1:0.0,Botryosphaeria_dothidea_NZ_D07:0.0):0.0):0.0):0.0):0.02655486,Guignardia_philoprina_FJ824768.1:0.1201007); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr55930] END;