#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 16, 2025; 7:55 GMT TreeBASE (cc) 1994-2008 Study reference: Voigt K., & Wstemeyer J. 2000. Reliable amplification of actin genes facilitates deep-level phylogeny. Microbiological Research, 155: 179-195. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S667] [ The following blocks are input data for analysis step 998 ] BEGIN TAXA; TITLE TaxaForAnalysisStep998; DIMENSIONS NTAX=57; TAXLABELS Absidia_glauca Achlya_bisexualis Arabidopsis_thaliana Aspergillus_nidulans Brassica_napus Brassica_oleracea Caenorhabditis_elegans Candida_albicans Chondrus_crispus Coleochaete_scutata Coprinus_cinereus Costaria_costata Cryptococcus_neoformans Cyanidioschyzon_merolae Cyanophora_paradoxa Cyprinus_carpio Dictyostelium_discoideum Drosophila_melanogaster Echinococcus_granulosus Emiliania_huxleyi Entamoeba_histolytica Equus_caballus Euglena_gracilis Euplotes_crassus Fugu_rubripes Gallus_gallus Giardia_lamblia Glycine_max Histoplasma_capsulatum Homo_sapiens Hydra_attenuata Kluyveromyces_lactis Leishmania_major Manduca_sexta Mesostigma_viride Mus_musculus Neurospora_crassa Phaffia_rhodozyma Physarum_polycephalum Phytophthora_infestans Pisaster_ochraceus Plasmodium_falciparum Pneumocystis_carinii Podocoryne_carnea Puccinia_graminis Pythium_irregulare Saccharomyces_cerevisiae Schizophyllum_commune Schizosaccharomyces_pombe Suillus_bovinus Tetrahymena_pyriformis Thermomyces_lanuginosus Trichoderma_reesei Trichomonas_vaginalis Volvox_carteri Yarrowia_lipolytica Zea_mays ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2593] TITLE Fig._1; LINK TAXA = TaxaForAnalysisStep998; DIMENSIONS NCHAR=386; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Absidia_glauca MSMEE--DI-AALVIDNASGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVG-MGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYSLPHAILRLDMAGRDLTDYLMRILAERGHSFTTTAEREIVRDIKEKLCYTGLDFEQEMQTAAQS-SALEKSYELPDGQVITVGNERFRAPEALFQPSFLGL-ESAGIHETTYNSIMKCDVDIRKDLYSNIVMSGGTTMYP-GIADRMQKEITALAP-SSMKIKIVAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Achlya_bisexualis ??MADD-DV-QALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHPGIMVG-MDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAES-SGLEKSYELPDGNVLVIGNERFRTPEVLFQPALIGK-EASGIHDCTFQTIMKCDVDIRKDLYCNIVLSGGTTMYP-GISERMTKELTALAP-STMKIKVVAPPERKYSVWIGGSILSSLSTFQQ-MWISKAEYDESGPSIVHRKCF Arabidopsis_thaliana ??MAEADDI-QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVG-MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTS-SSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFS-GIADRMSKEITALAP-SSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWISKAEYDEAGPGIVHRKCF Aspergillus_nidulans ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIG-MGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIVFETFNVPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFALPHAISRVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQEIQTASQS-SSLEKSYELPDGQVITIGNERFRAPKALFQPSVLGL-ESGGIHVTTFNSIIKCDVDVRKDLYGNIVMSGGTTMYP-GISDRMQKEITALAP-SSMKVKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Brassica_napus ??MADGEDI-QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG-MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMENIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSS-SSVEKNYELPDGQVITIGAERFRCPEVLFQPSLVGM-EAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP-GIADRMSKEITALAP-SSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWISKGEYDESGPSIVHRKCF Brassica_oleracea ??MAEADDI-QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVG-MNQKDANVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTS-SSIEKNYELPAGQVITIGAERFRCPEVLFQPSFVGM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFS-GIADRMSKEITALAP-SSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWIPKAEYDEAGPGIVHRKCF Caenorhabditis_elegans ??MCDD-EV-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM-ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP-GIADRMQKEITALAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Candida_albicans ??MDGE-EV-AALIIDNGSGMCKAGFAGDDAPRAVFPSLVGRPRHQGIMVG-MGQKDSYVGDEAQSKRGILTLRYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHGILRIDLAGRDLTNHLSKILSERGYSFTTSAEREIVRDIKERLCYVALDFEQEMQTSSQS-SAIEKSYELPDGQVITIGNERFRAPEALFRPADLGL-EAAGIDQTTFNSIMKCDMDVRKELYGNIVMSGGTTMFP-GIAERMQKEITALAP-SSMKVKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHHKCF Chondrus_crispus ??MSK-----PAVVIDNGSGRCKTGIAGEDCPKAVFPAVIGKPKQKGIMVG-TGQKDEYVGDAAMARRGVLIIKYPLEHGIVTNWDDMEKIWSHAFYSELRVDPQEHPVLLTEAPLNPKANRERMTQIMFESFNIPAFYVAIQAVLSLYASGRTSGIVLDSGDGVTHTVPIYEGYSLPHAVLRIDLAGRDLTGWMAKLLMQRGYSFTTSAELEIVRDVKQQLCFVAEDYEKELANASSN-SSLEKEYELPDGQVITVEAERFQCPEALFKPELLGI-EMDGMHLTAFNSIMKTDIDIRKDLYSNIVMSGGTTMFA-GIASRVQKEIETLAP-PSMKIKVIAPPERQYSVWIGGSILSSLSTFQQ-MWVSKTEYDEMGPSVVHRKCF Coleochaete_scutata ??MADGEEV-SALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYAFTTTAEREIVRDIKEKLAYVALDFEQEMQTAQNS-SSLEKSYELPDGQVITIGSERFRCPEVLFNPALIGM-ESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP-GIADRMSKEITALAP-SSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWIAKSEYDESGPSIVHRKCF Coprinus_cinereus ??MED--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFALPHAILRLDLAGRDLTDYLIKCLGERGYPFTTTAEREIVRDIKEKLCYVALDFEQEMQTAAQS-SSLEKSYELPDGQVITIGNERFRAPEALFQPAFLGL-EAAGIHETTYNSIFKCDLDIRRDLYGNVVLSGGTTMFS-GIADRMQKELLALSP-ASMRVKIVAPLERKYSVWIGGSILASLSTFQN-LWCSKQEYDESGPGIVHRKCF Costaria_costata ?????????????????????????????????????????????????VG-MDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANKERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAINRLDLAGRDLTDNLMKVLTERGYSFTTTAEREIVRDIKEKLTYVALDFDQEMKTAAES-SQLEKSYELPDGNVIVIGNERFRCPEVRFQPSFIGM-ESSGIHDCTFKTIMKCDVDIRKDLYGNIVLSGGTTMFP-GIGERMTKELTALAP-STMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWISKAEYDESGPSIVHRKCF Cryptococcus_neoformans ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEDDPVLLTEAPLNPKQNREKMTQIMFESFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFSLPHAILRIDLAGRDLTDYLVKILMERGYLFTTSAEREIVRDIKEKLCYVALDCEQELQTAAQS-SQLEKSYELPDGQVITIGNERFRCPEALFQPSLLGL-EAAGIHETTYNSIMKCDLDIRKDLYGNIVMSGGTTMYN-GIADRMQKEITALAP-SSMKVKIVSPPERKYSVWIGGSILASLSTFQQ-MWIAKSEYDESGPSIVHRKCF Cyanidioschyzon_merolae ??MTEE-EI-TALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQAVMVG-MGQKDSYVGDEAQSKRGILSLKYPIEHGIVTNWDDMEKIWYHTFYNELRISPEDHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVVDSGDGVTHTVPIYEGYALPHAIMRIDLAGRDLTDYLAKILTERGYSFTTTAEREIVRDIKEKCCYVAQDYDHELEIASSQPAKIDKQYELPDGQIITIGSERFRCPEVLFQPSLIGM-EGEGIHNVAYQSIMKCDVDIRKDLYANVVLSGGTTMFP-GIADRMQRELASVAP-SSVKIKLVAPAERKYSVWIGGSILASLSTFQQ-MWISKAEYDEFGPSVVHRKCF Cyanophora_paradoxa ??MED--EV-AALVIDNGTGMCKAGFAGDAARRAVFPVIVGAPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEG-ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFETEMQTASTS-STVEKTYELPDGQVITIGNEGFRCPEVLFQPSFIGM-ESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMY--AGIDRMQKEITALAP-SSMKIKIVAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Cyprinus_carpio ??MDD--EI-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYP-GIADRMQKEITSLAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Dictyostelium_discoideum ??MESE-DV-QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRYTGVMVG-MGQKDSYIGDEAQSRKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKRNREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYSLPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAELQTAASS-SALEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESAGIHETTYNSIMKCDVDIRKDLYSNVVLSGGSTMFP-GIADRMNKELTALAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKEEYDESGPSIVHRKCF Drosophila_melanogaster ??MCDD-DA-GALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAS-TSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYP-GIADRMQKEITALAP-STIKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPGIVHRKCF Echinococcus_granulosus ??MA-E-EI-TPLVVDNGSGMCKAGFAGDDSPRAVFPSLVGRPRQQSIMVG-MGNKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVRAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDWLTKLLTERGYAFTTTAELEIVRDIKEKLCYVALDFENEMATAATS-SSLEKTYELPDGQVITVGNERFRCPEALYQPSFLGL-ECNGIHETTYNSIMKCDLDIRKDLYSNVVLSGGSTMYP-GIADRMNKDLTALAP-TTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWITKQEYDESGPSIVHRKCF Emiliania_huxleyi ???????????????DNGSGMCKAGFAGDDAPRAVFPSIIGRPRQPGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIERGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDSGDGVS-TVPIYEGYAVPHAILRLDLAGRDLTDWMVKLLTERGYSFTTTAEREIVRDIKEKLAYVALDFDQEMQTAASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESAGVHETTYNSIMKCDVDIRKDLYANVVLSGGTTMYA-GIADRMSKEITALAP-ASMKVKIIAPPERKYSVWIGGSILSSLSTFQQ-MWISKQEYDESGPSIVHRKCF Entamoeba_histolytica ??MGDE-EV-QALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVSVMAG-MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYAFTTTAEREIVRDIKEKLCYVAEDFNEEMQKAASS-SELEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ECNGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTSMYP-GINTRLEKEMIQLAP-PTMKIKVIAPPERKYSVWIGGSILASLSTFQN-MWITKEEYDESGPAIVHRKCF Equus_caballus ??MDD--DI-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYP-GIADRMQKEITALAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Euglena_gracilis ??MAEEIEQ-QALVCDNGSGMVKAGFAGDDAPRCVFPSIVGRRKNDSAMMG-TAKKDAYIGDDAQAKRGILFIKYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEDHPVLLTEAPMNPKSNREKMTQIMFETFNVPALYVSIQAVLSLYSSGRTTGIVLDCGDGVSHTVPIYEGYSLPHAVLRIDMAGRDLTDYMMKLLTERGLSFTTSAEREIVRDVKEKLCYVALDFDEEMSLATSS-SSVEKEYELPDGNIIQVGSERFRCPEVLMKPSMIGL-EACGVHETTFNSINKCDIDVRKDLYSNIVLSGGTTMYE-GLPERMSKEITNLAP-NSMKIKVVAPPERKYSVWIGGSILASLSTFQS-MWIKKEEYDEAGPGIVHRKCF Euplotes_crassus ??MSEEENAKEAIVVDNGSGVVKAGFAGENQPCSVFPSVVAKPKTKQVIVGGAGNKDCFVGDERQQKRGVCTLSYPIKSGMIKDWDGMQKIWDYTFYNELRIETENHPVLLTEAPLNPKQNRENMCRIMFEEYDFPSMYIQIQAVLSLYSAGRTTGIVVDSGDGVTHVVPIFEGYQIPHAIEKILLAGRDLTDYMCRILKDDDYHFETTAEKETVRDIKEKLCYVADDYEAELKKAGEG-GELEESYALPDGRPLKISTQRFQCPEFLFQPDLGGR-ECKSVHQLTYDSIMTCDLDVRKDLYANIILSGGTTMFP-GLGERLYKEMKDLAP-QTMKVKVIASPDRKYAVWRGGSTLAKLSTFAG-MWVTKEDYAEFGESIVHRKCI Fugu_rubripes ??MSDY-DE-TALVCDNGSGLVKAGFAGDDTPRAVFHAIVGRPRHQDDMDD-MGKKGYYVGDEAQSKRDILSLKHPIERGIITNWDDMEKIWHHTFYNELCVAPEEHPTLLTEAPLNPKANREKMTQIMLETFNMPAMYVSIQAVLSLYASGRTTGIVLDSGEGVTHAVPIAEGYALPPAIMRLNLAGRDLTDYLMKILNERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASS-SSLEKRYELPDGQVITIGNERFCCPETLFQPSFMGM-ESAGIHEITHSSIMKCDIEIRKDLYANNVLTGGATLFP-GIADRMQKEITALAP-STMKIQIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYEEIGPSIIHCKCF Gallus_gallus ??MDD--DI-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYP-GIADRMQKEITALAP-STMKIKIIAPPERRYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Giardia_lamblia ??MTD--DN-PAIVIDNGSGMCKAGFAGDDAPRAVFPTVVGRPKRETVLVG-STHKEEYIGDEALAKRGVLKLSYPIEHGQIKDWDMMEKVWHHCYFNELRAQPSDHAVLLTEAPKNPKANREKICQIMFETFAVPAFYVQVQAVLALYSSGRTTGIVIDTGDGVTHTVPVYEGYSLPHAVLRSEIAGKELTDFCQINLQENGASFTTSAEFEIVRDIKEKLCFVALDYESVLAASMES-ANYTKTYELPDGVVITVNQARFKTPELLFRPELNNS-DMDGIHQLCYKTIQKCDIDIRSELYSNVVLSGGSSMFA-GLPERLEKELLDLIP-AGKRVRISSPEDRKYSAWVGGSVLGSLATFES-MWVSSQEYQENGASIANRKCM Glycine_max ??MADAEDI-QPLVCDNGTGMVKAGLAGDDAPRAVFPSIVGRPRHT-VVVG-MGQKDAYVGDEAQVQRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKYNREKMR-VMFETFGAPAVCVAVLAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLMKILTQRGYSFTTSAQRGIVRDMKEKLAYIALDCEQELETSETS-SSVEKSYELPDGQVITIGAERFGCPGVLYQPSMVGM-EASGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP-SIADRMSKEISALAP-SSMKIKVVAPSERKFGVWIGGSILASLSTFQQ-MWI-KAEYDESGPSIVHKKCF Histoplasma_capsulatum ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRSVFPSIVGRPRHHGIMIG-MGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFALPHAISRIDMAGRDLTNYLMKILAERGYSFSTTAEREIVRDIKEKLCYVALDFQQEIQTASQS-SSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGL-ESGGIHATTYNAIMKCDVDVRKDLYGNIVMSGGTTMYP-GISDRMQKEITRLAP-SSMKVKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Homo_sapiens ??MDD--DI-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYP-GIADRMQKEITALAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Hydra_attenuata ??MADD-EV-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASS-SSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGM-ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFP-GIADRMQKEISALAP-PTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Kluyveromyces_lactis ??MDS--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVG-MGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASMNPKNNREKMTQILFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDITDYLMKILAERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTASQS-SAVEKSYELPDGQVITIGNERFRAPEALFHPSVLSL-EAAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFP-GIAERMQKEITALAP-SSMKVKIIAPPERKYSVWIGGSILASLTTFQQ-MWISKQEYDESGPSIVHLKCF Leishmania_major ??MADN-EQ-SSIVCDNGSGMVKAGFSGDDAPRHVFPSIVGRPKNMQAMMG-SANKTVYVGDEAQSKRGVLSLKYPIEHGIVTNWDDMEKIWHHTFYNDVRVNPEQHNVLLTEAPMNPKQNREKMTQIMFETFNVPSLYIGIQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAVRRVDMAGRDLTEYLMKIMMETGTTFTTTAEKEIVRNVKEQLCYVALDFEEEMTNSAKS-AN-EEAFELPDGNVMMVGNQRFRCPEVLFKPSLIGLDEAPGFPEMVYQSINKCDIDVRRELYGNIVLSGGSTMFL-NLPERLAKEISNLAP-SSIKPKVVAPPERKYSVWIGGSILSSLTTFQT-MWVKKSEYDESGPSIVHNKCF Manduca_sexta ??MCDD-DV-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAS-TSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP-GIADRMQKEITALAP-STIKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKEEYDESGPGIVHRKCF Mesostigma_viride ??MADEGEV-SALMCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVAIDYEAELATANTS-SSIEKSYELPDGQVITIGNERFRCPEVLFNPGYVGM-ESAGIHETTYNSIMRCDVDIRKDLYGNIVLSGGSTMP--GIADRMSKEITALAP-SSMKIKVVAPPERKYSVWIGGSILASLSTFQA-MWIAKSEYDESGPSIVHRKCF Mus_musculus ??MCDEDET-TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASS-SSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGM-ESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP-GIADRMQKEITALAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWITKQEYDEAGPSIVHRKCF Neurospora_crassa ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRYHGIMIG-MGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFALPHAIARVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDINEKLCYVALDFEQEIQTAAQS-SSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGL-ESGGIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYP-GLSDRMQKEITALAP-SSMKVKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Phaffia_rhodozyma ??MDD--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTGYLVKCLMERGYPFTTTAEREIVRDIKEKLCYVALDFEQEMQTAAQS-SQLEKSYELPDGQVITIGNERFRCPEALFQPSFLGL-EAAGIHETTYNSIMKCDLDIRKDLYGNVVLSGGTTMYS-GIADRMQKEITSLAP-SSMKVKIVAPPERKYSVWIGGSILASLSTFQS-MWISKQEYDEAGPSIVHRKCF Physarum_polycephalum ??MEGE-DV-QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAASS-SALEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFP-GIADRMQKELTALAP-STMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKEEYDESGPSIVHRKCF Phytophthora_infestans ??MADD-DV-QALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHLGIMVG-MDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAES-SGLEKSYELPDGNVIVIGNERFRTPEVLFQPSLIGK-EASGIHECTFQTIMKCDVDIRKDLYCNIVLSGGTTMYP-GIGERMTKELTALAP-STMKIKVVAPPERKYSVWIGGSIQSSLSTFQQ-MWISKAEYDESGPSIVHRKCF Pisaster_ochraceus ??MCDE-DV-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM-ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFP-GIADRMQKEVTALAP-PTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Plasmodium_falciparum ??MGEE-VV-QALVVDNGSGNVKAGVAGDDAPRSVFPSIVGRPKNPGIMVG-MEEKDAFVGDEAQTKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRERMTQIMFESFNVPAMYVAIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTEYLMKILHERGYGFSTSAEKEIVRDIKEKLCYIALNFDEEMKTSEQS-SDIEKSYELPDGNIITVGNERFRCPEALFQPSFLGK-EAAGIHTTTFNSIKKCDVDIRKDLYGNIVLSGGTTMYE-GTGERLTRDITTLAP-STMKIKVVAPPERKYSVWIGGSILSSLSTFQQ-MWITKEEYDESGPSIVHRKCF Pneumocystis_carinii ??MED--EI-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKSNREKMTQIMFETFNTPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLNLAGRDLTDYLMKILTERGYNYTTTAEREIVRDIKERLCYVALDFEQEIHTASSS-SSLEKSYELPDGQVITIGNERFRAPEALFQPSIVGM-ETCGIHETTFNSIMKCDVDIRKDLYSNIVMSGGTTMYP-GIADRMQKEITALAP-SSMKIKIVAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDENGPSIVYRKCF Podocoryne_carnea ??MADD-DV-AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAASS-SSLEKSYELPDGQVITIGNERFRDPEALFQPAFLGM-ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFP-GIADRMQKEISSLAP-PTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Puccinia_graminis ??MEE--EV-AALVLDNGSGMCKAGFAGDDAPRAVFPSICGGPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVNREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLIKILMERGYSFTTTAEREIRRDIKEKLCYVGLDFEQEMQTASQS-SALEKSYELPDGQVITIGNERFRCPEALFQPSLLGL-EASGIHETTYNSIMKCDLDIRKDLYGNVVMSGGTTMYS-GISDRMQKEITALAP-SSMKVKIVAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHRKCF Pythium_irregulare ???????????????DNGSGMCKAGFAGDDAPRAVFPSIVGRPKHLGIMVG-MDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAES-SGLEKSYELPDGNVIVIGNERFRTPEVLFQPSLIGK-EALGIHDCTFQTIMKCDVDIRKDLYCNIVLSGGTTMYP-GIGERMTKELTALAP-STMKIKVVAPPERKYSVWIGGSILSSLSTFQQ-MWISKAEYDESGPSIVHRKCF Saccharomyces_cerevisiae ??MDS--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVG-MGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQS-SSIEKSYELPDGQVITIGNERFRAPEALFHPSVLGL-ESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFP-GIAERMQKEITALAP-SSMKVKIIAPPERKYSVWIGGSILASLTTFQQ-MWISKQEYDESGPSIVHHKCF Schizophyllum_commune ??MED--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFALPHAILRLDLAGRDLTDFLIKNLMERGYPFTTTAEREIVRDIKEKLCYVALDFEQELQTAAQS-SALEKSYELPDGQVITIGNERFRAPEALFQPAFLGL-EAAGIHETTYNSIFKCDLDIRRDLYGNVVLSGGTTMFP-GIADRMQKELTALSP-SSMKVKIVAPPERKYSVWIGGSILASLSTFQN-LWCSKQEYDESGPGIVHRKCF Schizosaccharomyces_pombe ??MEE--EI-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQS-SSLEKSYELPDGQVITIGNERFRAPEALFQPSALGL-ENAGIHEATYNSIMKCDVDIRKDLYGNVVMSGGTTMYP-GIADRMQKEIQALAP-SSMKVKIVAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPGIVYRKCF Suillus_bovinus ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGFALPHAILRLDLAGRDLTDHLIKNLIERGYSFTTTAEREIVRDIKEKLWYVALDFEQEIKTAGQS-SALEKSCELPDGQVITIGNERFRAPEALFQPAFLGL-EAAGIHETTYNSIFKCDLDIRRDLYANVVLSGGTTMFP-GIADRMQKELTSLSP-SSMKVKIVAPPERKYSVWIGGSILASLSTFQN-LWCSKQEYDESGPGIVHRKCF Tetrahymena_pyriformis ??MTDS-DS-PAIVIDNGSGMCKAGIAGDDAPRAAFPSIIGRPKMPGIMVG-MDQKECYVGEEAQAKRGVLNLKYPIEHGIVTDYDDMEKIWHHCFYNELRVTPEEHPCLLTEAPQNPKLNREKMTKTMFETFNVPSFYVAIQAVLSLYASGRTTGIVVDSGDGVTHTVSIYEGYALPHAILRIDLAGRDLTEYCMKLLYEIGLNFSSTAEREIIRDIKEKLCYVALDYESELKAYKES-STNDKSYELPDGNTITVQDQRFRCPELLFKPAFIGK-EFPGIHELTFNSIMKCDVDVRKDLYNNIVLSGGTTMFP-GIAERLSKEVSALAP-SSMKIKVVAPPERRYSVWIGGSILSSLSTFQT-MWITKAEYDESGPSIVHRKCF Thermomyces_lanuginosus ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIG-MGQKDSYVGDEAQSKRGVLSLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFALTHAISRIDIAGRDLTDYLMKILAERGYSFTTTAEREIVRDIKEKLCYVAFDFEQELQTAAQS-STLEKSYELPDGQVITIGNERFRAPEALFNPAVLGH-ESGGIHETTFNSIIKCDVDVRKDLYGNIVMSGGTTMYP-GIADRMQKELTALAP-SSMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWVSKQEYDESGPSIVHRKCF Trichoderma_reesei ??MEE--EV-AALVIDNGSGMCKAGFAGDDAPRAVFPSIDGRSRHHGIMIG-MGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIMFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTTVVPIYEGFALPHAIRRVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVAHDFEQEIQTAAQS-SSLEKSYELPDAQVITIG-DRFRAPQALFHASVLGL-ESAGIDVTTFNSIMKCDVDVRKELYGNIVMSGGTTMFPQGISDRMQKEITASAPSSAMKVKIIAPPERKYSVWIGGSILASLTTFQQ-MWISKQEYDESGPSIVHHKCF Trichomonas_vaginalis ??MAEE-DV-QTLVIDNGSGMCKAGFSGDEAPRSVFPSVVGRPKYKQQLVG-GNAKDVFVGDEACSKAGVLILKYPIEHGIVNNWDDMEKIWHHTFYNELRVDPTEHPVLLTEAPLNPKANREKMISLMFDTFNVPSFYVGIQAVLSLYSSGRTTGIVFDAGDGVSHTVPIYEGYSLPHAIMRLNLAGRDLTAWMVKLLTERGNAFNTTAEKEIVRDIKEKLCYVALDFDAEMEKAATD-SSINVNYTLPDGNVITIGNERFRCPEMLFKPYFDGM-EYDGIDKTLFDSIMKCDIDVRKDLYANIVLSGGTTMFK-GIAERLDKEITALAP-PTMKVKIVAPEERKYAVWVGGSILASLATFPQ-MVITKEEYDEAGPSIVHRKCF Volvox_carteri ??MAEEGEV-SALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG-MGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SALEKTYELPDGQPITIGNERFRCPEVLYNPSLIGM-EAVGIHDTTFNSIMKCDVDIRKDLYNNIVLSGGTTMFP-GIADRMTKEITALAP-SAMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWIAKSEYDESGPSIVHRKCF Yarrowia_lipolytica ??MED--ET-VALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-MGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEGPINPKSNREKMTQIFFETFNAPAFYVSIQAVLSLYASGRVTGIVLDSGDGVTHVVPIYSGFSLPHAIMRLDMAGRDLTDYLMKILSERGYSFTNSAEREIVRDIKEKLCYVALDFEQELQTASQS-SSLEKSYELPDGRVITIGNERFRAPEALFHPSMLGL-EAAGIHETTFNSIMKCDVDVRKDLYGNIVMSGGTTMYP-GIAERMHKEISALAP-TSIKVKITAPLERKYSVWIGGSILASLGTFQQ-MWISKQEYDEAGPTIVHRKCY Zea_mays ??MAD-EDI-QPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG-MGQKDAYVGDEAQAKRGILTLKYPIEHGIVNNWDDMEN-WHHTFYNELRVSPEDHPVLLTEAPLNPKANREKMTQIMFETFECPAMYVAIEAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYTLPHAILRLDLAGRDLTDHLMKILTERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETAKSS-SSVEKSYEMPDGQVITIGSERFRCPEVLFQPSLVGM-ESPSVHEATYNSIMKCDVDIRKDLYGNVVLSGGFTMFP-GIADRMSKEITSLVP-SSMKVKVVAPPRRKYSVWIGGSILASLSTFQQQMWISKGEYDETGPGIVHMKCF ; END; [ The following blocks are output data for analysis step 998 ] BEGIN TREES; TITLE Tb5774; LINK TAXA = TaxaForAnalysisStep998; TREE Fig._3 = [&R] (((((((((Absidia_glauca,(((((Aspergillus_nidulans,Trichoderma_reesei),Neurospora_crassa),Histoplasma_capsulatum),Thermomyces_lanuginosus)Euascomycetes,((Candida_albicans,(Kluyveromyces_lactis,Saccharomyces_cerevisiae)),Yarrowia_lipolytica)hemiascomycetes)Ascomycota),(Schizosaccharomyces_pombe,(((Coprinus_cinereus,Schizophyllum_commune),Suillus_bovinus)Homobasidiomycetes,((Cryptococcus_neoformans,Phaffia_rhodozyma),Puccinia_graminis)Heterobasidiomycetes)Basidiomycota)),Pneumocystis_carinii)Eumycota,((((((Emiliania_huxleyi,((Echinococcus_granulosus,Entamoeba_histolytica),(Dictyostelium_discoideum,Physarum_polycephalum)Mycetozoa)),(Hydra_attenuata,Podocoryne_carnea)Hydrozoa),Pisaster_ochraceus),(Drosophila_melanogaster,Manduca_sexta)),(Caenorhabditis_elegans,(Fugu_rubripes,Mus_musculus))),(Cyprinus_carpio,(Gallus_gallus,Equus_caballus,Homo_sapiens)))),Cyanophora_paradoxa),((Cyanidioschyzon_merolae,(((Arabidopsis_thaliana,Brassica_oleracea),Glycine_max),(Brassica_napus,Zea_mays))),(Volvox_carteri,(Mesostigma_viride,Coleochaete_scutata)))),((Chondrus_crispus,Giardia_lamblia),Tetrahymena_pyriformis)),((Achlya_bisexualis,(Phytophthora_infestans,Pythium_irregulare))Oomycota,Costaria_costata)Stramenopiles),(((Euglena_gracilis,Leishmania_major),(Euplotes_crassus,Trichomonas_vaginalis)),Plasmodium_falciparum)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3663] END;