TreeBASE Search-Analyses for study 158

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Analyses for Study 158

Citation title: "Phylogenetic studies in the Gerbera-complex (Compositae, tribe Mtisieae, subtribe Mutisiinae).".

This study was previously identified under the legacy study ID S1x29x96c18c05c45 (Status: Published).

Analyses

Analysis 1

Analysis details

Name
Notes

Input data

1 Input object(s)

Analysis step

BI phylogeny estimate --

Output data

1 Output object(s)

Analysis 2

Analysis details

Name
Notes

Input data

1 Input object(s)

Analysis step

BI calibrated phylogeny estimates --

Output data

3 Output object(s)

Analysis 3

Analysis details

Name
Notes

Input data

1 Input object(s)

Analysis step

ML tree estimation 262 plastomes --

Step details

Name

Software used

Name
Version
URL
Algorithm
Commands
raxmlHPC-HYBRID -T 4 -s infile.txt -N 1000 -m GTRCAT -p 12345 -b 12345 -o Joinvillea_ascendens -n testR raxmlHPC-PTHREADS -T 4 -f d -m GTRCAT -N 100 -s infile.txt -n testB -p 12345 -O -o Joinvillea_ascendens

Output data

1 Output object(s)

Analysis 4

Analysis details

Input data

1 Input object(s)

Output data

Analyses for Study 158

Analyses

Analysis 1

1 Input object(s)

BI phylogeny estimate --

1 Output object(s)

Analysis 2

1 Input object(s)

BI calibrated phylogeny estimates --

3 Output object(s)

Analysis 3

1 Input object(s)

ML tree estimation 262 plastomes --

1 Output object(s)

Analysis 4

1 Input object(s)

Calibration of the 581 taxa phylogeny by penalised likelihood And Maximum Likelihood --

1 Output object(s)