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Matrix 2032 of Study 370

About Citation title: "Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences.".
About This study was previously identified under the legacy study ID S304 (Status: Published).

Matrices

Title: rDNA

Description: Legacy TreeBASE Matrix ID = M346

Rows

Taxon Label Row Segments Characters 1?–30
Escherichia coli  (none) ----------------------AAATTGAA
Agrobacterium  (none) --------------------CTCAACTTGA
Rhodocyclus  (none) ---------------------TGAACTGAA
Desulfovibrio  (none) ---------------------TGAACTGGA
Leptonema  (none) TAATCTATCGCAAGATAGATTCATAACGGA
Chlorobium  (none) -----------------------CAACGGA
Flavobacterium  (none) -----------------------CAATGGA
Flexibacter  (none) -----------------TATATACAATGGA
Gloeobacter  (none) ------------------------------
Synechococcus  (none) ---------------------CAAAATGGA
Arthrobacter  (none) --------------------TTTCAACGGA
Heliobacterium  (none) -----------------------TTGTGGA
Clostridium  (none) ---------------------TTTAATTGA
Bacillus  (none) ---------------------TTTATCGGA
Chlamydia  (none) ----------------------TTTTCTGA
Planctomyces  (none) ----------------------CAATTGAA
Thermomicrobium  (none) ---------------------GGGGATGGA
Thermus thermophilus  (none) ---------------------TTTGTTGGA
Thermotoga  (none) ----------------------TATATGGA
Aquifex pyrophilus  (none) ---------------------TTCCCTGAA
Sulfolobus  (none) ---------------------------ATT
Obsidian pool pJP 78  (none) ------------------------------
Obsidian pool pJP 27  (none) ------------------------------
Obsidian pool pSL 17  (none) ------------------------------
Obsidian pool pSL 22  (none) ------------------------------
Obsidian pool pSL 4  (none) ------------------------------
Obsidian pool pSL 12  (none) ------------------------------
Marine SBAR5  (none) ----------------------------TT
Obsidian pool pSL 50  (none) ------------------------------
Obsidian pool pJP 96  (none) ------------------------------
Pyrodictium  (none) ---------------------------ACT
Desulfurococcus  (none) ---------------------------ACT
Thermoproteus  (none) ---------------------------AAA
Thermofilum  (none) ---------------------------ACT
Methanopyrus  (none) ---------------------------ACT
Thermococcus  (none) ---------------------------ATT
Archaeoglobus fulgidus  (none) ---------------------------ATT
Thermoplasma  (none) ---------------------------ACT
Methanothermus  (none) ---------------------------ACT
Methanobacterium  (none) ---------------------------AGT
Methanococcus vanneilii  (none) ---------------------------ATT
Methanococcus janneschii  (none) ---------------------------ATT
Methanospirillum  (none) ---------------------------ATT
Haloferax  (none) ---------------------------ATT
Tritrichomonas  (none) ---------------------------TAC
Giardia  (none) ---------------------------CAT
Hexamita  (none) ---------------------------TAC
Vairimorpha  (none) ---------------------------CAC
Encephalitozoon  (none) ---------------------------CAC
Physarum  (none) ---------------------------TAC
Entamoeba  (none) ---------------------------TAT
Naegleria  (none) ---------------------------TAC
Euglena geniculata  (none) ---------------------------AAT
Trypanosoma  (none) ---------------------------GAT
Dictyostelium  (none) ---------------------------TAA
Babesia canis  (none) ---------------------------AAC
Paramecium  (none) ---------------------------AAT
Achlya bisexualis  (none) ---------------------------AAC
Costaria  (none) ---------------------------AAT
Porphyra  (none) ---------------------------AAC
Zea mays  (none) ---------------------------TAC
Homo sapiens  (none) ---------------------------TAC
Coprinus  (none) ---------------------------TAC
Cryptomonas  (none) ---------------------------TAC

Columns

None of the columns has a description.