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Matrix 57987 of Study 26669
Citation title: "Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa".
Study name: "Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa".
This study is part of submission 26669
(Status: Published).
Matrices
Title: Cytospora - ITS alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Cytospora pruinosa CH_13 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora cotini KX430142_MFLUCC_14_1050 | (none) | CATTGCTGG-A-GCGCCGCAAGGCGCACCC |
| Cytospora nivea KY417737_MFLUCC_15_0860 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora paratranslucens KY417741_MFLUCC_15_0506 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora rusanovii KY417744_MFLUCC_15_0854 | (none) | CATTGCTGGA--GCGCCGCAAGGCGCACCC |
| Cytospora curvata KY417728_MFLUCC_15_0865 | (none) | CATTTAAGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora parakantschavelii KY417738_MFLUCC_15_0857 | (none) | --------AGC-GCGC----AGGCGCACCC |
| Cytospora salicina KY417750_MFLUCC_15_0862 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora melnikii KY417735_MFLUCC_15_0851 | (none) | CATTGCTGGAA-GCGCCACAAGGCGCACCC |
| Cytospora salicacearum KY417746_MFLUCC_15_0509 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora ulm KY417759_MFLUCC_15_0863 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora sorbi KY417752_MFLUCC_16_0631 | (none) | -----------------------TGCACCC |
| Cytospora sorbicola KY417755_MFLUCC_16_0584 | (none) | ----------------CGC-AGGTGCACCC |
| Cytospora erumpens KY417733_MFLUCC_16_0580 | (none) | -------------ACGCGC-AGGTGCACCC |
| Cytospora longiostiolata KY417734_MFLUCC_16_0628 | (none) | ---------------GCGCGCAGCGCACCC |
| Cytospora ampulliformis KY417726_MFLUCC_16_0583 | (none) | ----------------CGC-AGGCGCACCC |
| Cytospora predappioensis MH253451_MFLU_17_0327 | (none) | -----CTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora predappioensis MG873484_MFLUCC_17_2458 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora rosae MF190131_MFLU_17_0885 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora quercicola MF190129_MFLU_17_0881 | (none) | CATTGCTGGAA-GCGCCGC-AGGTGCACCC |
| Cytospora lumnitzericola MG975778_MFLUCC_17_0508 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora xylocarpi MG975775_MFLUCC_17_0251 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora thailandica MG975776_MFLUCC_17_0262 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora prunicola MG742350_MFLU_17_0995 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora californica MG971935_9C_24 | (none) | ----------------CGCAAGGTGCACCC |
| Cytospora granati MG971799_6F_45 | (none) | ----------------CGCAAGGCGCACCC |
| Cytospora longispora MG971905_10F_57 | (none) | ----------------CGCAAGGCGCACCC |
| Cytospora punicae MG971943_5A_80 | (none) | ----------------CGCAAGGTGCACCC |
| Cytospora multicollis DQ243803_CBS_105.89 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora ceratosperma AY347335_CBS_116.21 | (none) | CATTGCTGAAA-GCGCCGCAAGGTGCACCC |
| Diaporthe vaccinii NR_103701_CBS_160.32 | (none) | CATTGCTGGAA-CGCGCCCCAGGCGCACCC |
| Cytospora ribis DQ243810_CBS_187.36 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora friesii AY347328_CBS_194.42 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCTCCC |
| Cytospora cedri AF192311_CBS_196.50 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora pruinosa DQ243801_CBS_201.42 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora fugax AY347323_CBS_203.42 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora pini AY347316_CBS_224.52 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora japonica AF191185_CBS_375.29 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora acaciae DQ243804_CBS_468.6 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora fraxinigena MF190133_IT_1562 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora junipericola MF190125_IT_1643 | (none) | CATTGCTGG-A-GCGCCGCAAGGTGCACCC |
| Cytospora centrivillosa MF190122_IT_2132 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Hyaliappendispora galii NR_154107_IT_2925 | (none) | CATTGGTGGAA--CGCGCCCCGGCGCACCC |
| Cytospora tibouchinae KX228284_CPC_26333 | (none) | CATTGCTGGAACGCGTCGCAAGGCGCACCC |
| Cytospora mougeotii AY347329_ATCC_44994 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora mali MH933641_CFCC_50028 | (none) | ------------------------------ |
| Cytospora pruinopsis KP281259_CFCC_50034 | (none) | ------------------------------ |
| Cytospora ribis KT222840_CFCC_50038 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora schulzeri KR045649_CFCC_50040 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora sibiraeae KR045651_CFCC_50045 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora spiraeae MG707859_CFCC_50049 | (none) | ------------------------------ |
| Cytospora beilinensis MH933619_CFCC_50493 | (none) | ------------------------------ |
| Cytospora bungeanae MH933621_CFCC_50495 | (none) | ------------------------------ |
| Cytospora carbonacea MH933622_CFCC_50496 | (none) | ------------------------------ |
| Cytospora celtidicola MH933623_CFCC_50497 | (none) | ------------------------------ |
| Cytospora eunymicola MH933628_CFCC_50499 | (none) | ------------------------------ |
| Cytospora juniperina MH933632_CFCC_50501 | (none) | ------------------------------ |
| Cytospora platycladi MH933645_CFCC_50504 | (none) | ------------------------------ |
| Cytospora tamaricicola MH933652_CFCC_50508 | (none) | ------------------------------ |
| Cytospora sophoricola KR045655_CFCC_89595 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora sophorae KR045654_CFCC_89598 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora sophoriopsis KR045623_CFCC_89600 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora atrocirrhata KR045618_CFCC_89615 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora gigalocus KR045628_CFCC_89620 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora leucosperma KR045616_CFCC_89622 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora sacculus KR045647_CFCC_89626 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora elaeagni KR045626_CFCC_89632 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora hippophaes KR045632_CFCC_89639 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora populina KF765686_CFCC_89644 | (none) | ------------------------------ |
| Cytospora rostrata KR045643_CFCC_89909 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora berberidis KR045620_CFCC_89927 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora ailanthicola MH933618_CFCC_89970 | (none) | ------------------------------ |
| Cytospora chrysosperma MH933625_CFCC_89981 | (none) | ------------------------------ |
| Cytospora eunymina MH933630_CFCC_89993 | (none) | ------------------------------ |
| Cytospora eucalypticola AY347358_ATCC_96150 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Waydora typica KF727412_PDD_103894 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora brevispora AF192315_CBS_116811 | (none) | CATTGCTGAAA-GCGCG?CAAGGTGCACCC |
| Valsa cypri DQ243790_CBS_118555 | (none) | CATTGCTGAAA-GCGCCGCAAGGTGCACCC |
| Cytospora kunzei DQ243791_CBS_118556 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora salicicola KU982636_MFLUCC_141052 | (none) | ------------------------------ |
| Cytospora punicae CSN1153_ITS5 | (none) | ------------------------------ |
| Valsa cypri CSN577_ITS5 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora punicae CSN619_ITSds | (none) | ---------------------------CCC |
| Cytospora punicae CSN620_ITS5 | (none) | CATTGCTGG-A-GCGCCGC-AGGCGCACCC |
| Cytospora punicae CSN621_ITSds | (none) | -ATTGCT-GGA-GCGCCGCAAGGCGCACCC |
| Cytospora punicae CSN622_ITS4 | (none) | ------------------------------ |
| Valsa cypri CSN623_ITSds | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora punicae CSN625_ITS4 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora punicae CSN627_ITS4_CS025extraction | (none) | ------------------------------ |
| Cytospora abyssinica AY347353_CMW10181 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora amygdali MG971853_LH357 | (none) | ----------------CGCAAGGTGCACCC |
| Cytospora austromontana AY347361_CMW6735 | (none) | CATTGCTGGAACGCGTCGCAAGGCGCACCC |
| Cytospora berkeleyi AY347350_StanfordT3 | (none) | CATTGCTGGAACGCGTCGCAAGGCGCACCC |
| Cytospora carpobroti MH382812_CMW48981 | (none) | ------------------------------ |
| Cytospora cinereostroma AY347377_CMW5700 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora davidiana KM034870_CXY1350 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora diatrypelloidea AY347368_CMW8549 | (none) | CATTGCTGGAACGCGTCGCAAGGCGCACCC |
| Cytospora eriobotryae AY347327_IMI136523 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora eucalypti AY347340_LSEQ | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora eucalyptina AY347375_CMW5882 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora eugeniae AY347364_CMW7029 | (none) | CATTGCTGGAACGCGCCGCGAGGCGCACCC |
| Cytospora germanica JQ086563_CXY1322 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora joaquinensis MG971895_KARE975 | (none) | ----------------CGCAAGGCGCACCC |
| Cytospora kantschavelii KM034867_CXY1383 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora leucostoma AF191181_T28.1 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora myrtagena AY347363_HiloTib1 | (none) | CATTGCTGGAACGCGTCGCAAGGTGCACCC |
| Cytospora nitschkei AY347356_CMW10180 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora oleicola MG971944_KARE1021 | (none) | ----------------CGCAAGGTGCACCC |
| Cytospora palm JN411939_CXY1280 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora parapistaciae MG971804_KARE270 | (none) | ----------------CGCGAGGCGCACCC |
| Cytospora pistaciae MG971802_KARE443 | (none) | ----------------CGCAAGGCGCACCC |
| Cytospora plurivora MG971861_KARE1452 | (none) | ----------------CGCAAGGCGCACCC |
| Cytospora populicola MG971891_KARE973 | (none) | ----------------CGCAAGGCGCACCC |
| Cytospora rhizophorae EU301057_MUCC302 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora tanaitica KT459411_MFLUCC141057a | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora translucens KM034874_CXY1351 | (none) | CATTGCTGGAA-GCGCCGCAAGGCGCACCC |
| Cytospora valsoidea AF192312_CMW4309 | (none) | CATTGTTGGAA-CGCGCTC??GAAGCACCC |
| Cytospora variostromatica AY347366_CMW6766 | (none) | CATTGCTGAAA-GCGCCGCAAGGTGCACCC |
| Cytospora vinacea KX256256_Cyt5 | (none) | ------------------------------ |
| Cytospora viticola KX256239_Cyt6 | (none) | ------------------------------ |
| Valsa cypri ID203_ITS4_CS025 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Cytospora olivarum MK514094_UCD634_Oe | (none) | ----------------CGCAAGGTGCACCC |
| Cytospora olivarum MK514095_UCD644_Oe | (none) | ----------------CGCAAGGTGCACCC |
| Valsa cypri PMM2025_ITSds | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
| Valsa cypri PMM2026_ITS1 | (none) | ------------------------------ |
| Valsa cypri PMM2029_ITS1 | (none) | ------------------------------ |
| Valsa cypri PMM2030_ITS1 | (none) | ------------------------------ |
| Valsa cypri PMM2033_ITS1 | (none) | ------------------------------ |
| Valsa cypri PMM2077_ITS1 | (none) | ------------------------------ |
| Diaporthe ampelina STE_U2660 | (none) | ------------------------------ |
| Valsa cypri DQ243789_PPRI6334 | (none) | CATTGCTGGAA-GCGCCGCAAGGTGCACCC |
Columns
None of the columns has a description.
