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Citation
Taxa
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Matrix 1209 of Study 20991
Citation title: "Increased affinity for RNA targets evolved early in animal and plant Dicer lineages through different structural mechanisms ".
Study name: "Increased affinity for RNA targets evolved early in animal and plant Dicer lineages through different structural mechanisms ".
This study is part of submission 20991
(Status: Published).
Matrices
Title: Combined
Description: Legacy TreeBASE Matrix ID = M2711
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Cylindrocladium sp. | (none) | -----------GCTTC-TGAGACG--CGTG |
| Cylindrocladium australiense | (none) | -----------GATTT-CGAGACG--CGAG |
| Cylindrocladium avesiculatum | (none) | -----------------------G--CGTG |
| Cylindrocladium madagascariense CPC 2322 | (none) | -----------------------G--CGTG |
| Cylindrocladium madagascariense CBS 114571 | (none) | ----------GACTTC-TGAGACG--CGTG |
| Cylindrocladium madagascariense CBS 114539 | (none) | -----------------------G--CGTG |
| Cylindrocladium madagascariense CBS 114572 | (none) | ----------GACTTC-TGAGACG--CGTG |
| Cylindrocladium macroconidiale CPC 413 | (none) | -----------------------G--CGTG |
| Cylindrocladium macroconidiale CBS 114880 | (none) | -----------------------G--CGTG |
| Cylindrocladium colhounii CBS 114704 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 114695 | (none) | -------CATGGCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 114660 | (none) | ----------GGCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CPC 705 | (none) | -----------------------G--CGTG |
| Cylindrocladium colhounii CPC 1237 | (none) | -----------------------G--CGTG |
| Cylindrocladium colhounii CPC 681 | (none) | -----------------------G--CGTG |
| Cylindrocladium colhounii CBS 112739 | (none) | -------CATGGCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 114036 | (none) | ------TCATGGCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 293.79 | (none) | ------TCATGGCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 111367 | (none) | -----------------------G--CGTG |
| Cylindrocladium colhounii CBS 112951 | (none) | ---------TGGCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 111205 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Cylindrocladium colhounii CBS 112948 | (none) | -----------------------A--CGTG |
| Calonectria reteaudii CBS 112955 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Calonectria reteaudii CBS 112149 | (none) | ------------TCTG-AGAGACG--CGTG |
| Calonectria reteaudii CBS 112146 | (none) | ------------TCTG-AGAGACG--CGTG |
| Calonectria reteaudii CBS 112155 | (none) | ------------TCTC-AGAGACG--CGTG |
| Calonectria reteaudii CBS 112151 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Calonectria reteaudii CBS 112634 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Calonectria reteaudii CPC 3217 | (none) | ------------TCT---GAGACG--CGTG |
| Calonectria reteaudii CBS 113582 | (none) | -----------------------G--CGTG |
| Calonectria reteaudii CBS 113583 | (none) | -----------------------G--CGTG |
| Calonectria reteaudii CBS 112143 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Calonectria reteaudii CBS 112147 | (none) | ------------TCT---GAGACG--CGTG |
| Calonectria reteaudii CBS 112153 | (none) | ------------TCT---GAGACG--CGTG |
| Calonectria reteaudii CBS 112144 | (none) | ------------TCTG-AGAGACG--CGTG |
| Calonectria reteaudii CBS 582.50 | (none) | ------------TCT---GAGACG--CGTG |
| Calonectria reteaudii CBS 113925 | (none) | -----------------------G--CGTG |
| Cylindrocladium acicola CPC 10898 | (none) | ------TCGTGGCTTC-TGAGACG--AGTG |
| Cylindrocladium acicola CBS 114813 | (none) | ------TCGTGGCTTC-TGAGACG--AGTG |
| Cylindrocladium acicola CBS 114812 | (none) | ------TCGTGGCTTC-TGAGACG--AGTG |
| Cylindrocladium multiseptatum CPC 1602 | (none) | -----------------------G--AGTG |
| Cylindrocladium multiseptatum CBS 112682 | (none) | ------TCGTGGCTTC-TGAGACG--AGTG |
| Cylindrocladium ecuadoriae CBS 111383 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium ecuadoriae CBS 111394 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium ecuadoriae CBS 111393 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium ecuadoriae CBS 111406 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium ecuadoriae CBS 111412 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium ecuadoriae CBS 111425 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111478 | (none) | -----------GCTTC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111458 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111382 | (none) | -----------------------G--CGTG |
| Cylindrocladium gracile CBS 111465 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 114167 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111456 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111468 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 115680 | (none) | ---------------C-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111129 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111474 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium clavatum | (none) | -----------------------G--CGTG |
| Cylindrocladium gracile CBS 111476 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 111390 | (none) | ----------AGCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 114171 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 115769 | (none) | ---------------C-TGAGACG--CGTG |
| Cylindrocladium gracile CBS 110676 | (none) | -----------------------G--CGTG |
| Cylindrocladium gracile CBS 112673 | (none) | -----------------------G--CGTG |
| Cylindrocladium gracile CBS 111869 | (none) | -----------------------G--CGTG |
| Cylindrocladium gracile CBS 111475 | (none) | -----------------------G--CGTG |
| Cylindrocladium gracile CBS 112694 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CBS 114666 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CPC 11352 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CPC 11350 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CBS 112676 | (none) | -----------------------G--CGTG |
| Cylindrocladium flexuosum CBS 112675 | (none) | -----------------------?--???? |
| Cylindrocladium flexuosum CPC 11349 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CPC 11351 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CPC 11348 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CPC 11347 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium flexuosum CBS 114557 | (none) | -----------------------G--CGTG |
| Cylindrocladium pseudogracile CBS 111284 | (none) | -----------GCTCT-TGAGACG--CGTG |
| Cylindrocladium pseudogracile AR2677 | (none) | -----------------------G--CGTG |
| Cylindrocladium pseudogracile CBS 114454 | (none) | -----------------------G--CGTG |
| Cylindrocladium hawksworthii | (none) | -----------------------G--CGTG |
| Cylindrocladium pteridis CPC 12072 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CPC 11619 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CPC 11618 | (none) | ------------CTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CBS 111793 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CPC 12114 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CPC 11569 | (none) | -----------GCTCC-CGAGACG--CGTG |
| Cylindrocladium pteridis CPC 11435 | (none) | ------TCAGAGCTCC-CGAGACG--CGTG |
| Cylindrocladium pteridis CPC 11284 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CBS 111867 | (none) | -----------GCTCC-CGAGACG--CGTG |
| Cylindrocladium pteridis CBS 111871 | (none) | -----------GCTCC-CGAGACG--CGTG |
| Cylindrocladium pteridis CBS 111778 | (none) | -----------------------G--CGTG |
| Cylindrocladium curvisporum CPC 763 | (none) | -----------------------G--CGTG |
| Cylindrocladium curvisporum CPC 765 | (none) | -----------------------G--CGTG |
| Cylindrocladium penicilloides | (none) | -----------------------G--CGTG |
| Cylindrocladium pteridis CPC 2869 | (none) | -----------------------G--CGTG |
| Cylindrocladium pteridis CPC 2190 | (none) | -----------------------G--CGTG |
| Cylindrocladium pteridis CPC 11285 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium pteridis CPC 11286 | (none) | ------TCAGAGCTCC-TGAGACG--CGTG |
| Cylindrocladium gordoniae | (none) | -----------------------G--CGTG |
| Calonectria leguminum | (none) | ------------TCT--TGAGACG--CGTG |
| Cylindrocladium rumohrae CBS 111431 | (none) | -----------------------G--CGTG |
| Cylindrocladium rumohrae UFV 215 | (none) | -----------------------G--CGTG |
| Cylindrocladium rumohrae CBS 114529 | (none) | -----------------------?--???? |
| Cylindrocladium angustatum CBS 112133 | (none) | CTCCTGCTT--------TGCAACG--CGTG |
| Cylindrocladium angustatum CBS 114767 | (none) | CCAGAGCTCCTGCTT--TGCAACG--CGTG |
| Cylindrocladium angustatum CBS 114766 | (none) | CCAGAGCTCCTGCTT--TGCAACG--CGTG |
| Cylindrocladium angustatum CBS 114544 | (none) | -----------------------G--CGTG |
| Cylindrocladium hurae FTCC 1003 | (none) | -----------------------G--CGTG |
| Cylindrocladium hurae CBS 114182 | (none) | -----------GCTCTATGAGACGAGCGTG |
| Cylindrocladium hurae FTCC 1002 | (none) | -----------------------G--CGGG |
| Cylindrocladium hurae CBS 114551 | (none) | -----------------------?--???G |
| Cylindrocladium theae CBS 111399 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium theae ATCC 48895 | (none) | -----------------------G--CGTG |
| Cylindrocladium theae CBS 114684 | (none) | -----------------------G--CGTG |
| Cylindrocladium theae CBS 114175 | (none) | -----------GCTTA-TGAGACG--CGTG |
| Cylindrocladium theae CBS 111705 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium graciloideum CBS 111141 | (none) | -----------GCTCC-TGAGACG--CGTG |
| Cylindrocladium graciloideum CBS 111040 | (none) | -----------GCTACCTGAGACG--CGTG |
| Cylindrocladium graciloideum CBS 115674 | (none) | -----------------------A--CGTG |
| Cylindrocladiella lageniformis | (none) | -------CAGCTTCCACTCGATACAACGCG |
| Cylindrocladiella peruviana | (none) | -------CAGCTCCCACTCGAGCCAGCGCG |
Columns
None of the columns has a description.
