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Matrix 4170 of Study 10211

About Citation title: "Phylogeny-based delimitation of species boundaries and contact zones in the trilling chorus frogs (Pseudacris)".
About This study was previously identified under the legacy study ID S1802 (Status: Published).

Matrices

Title: 12S and 16S rDNA

Description: Legacy TreeBASE Matrix ID = M3294

Rows

Taxon Label Row Segments Characters 1?–30
Pseudacris feriarum MD AnneArundel JTC2730  (none) ------------------------------
Pseudacris feriarum MD Baltimore ECM0632  (none) ------------------------------
Pseudacris feriarum MD Harford ECM0630  (none) -------------------------TAGAG
Pseudacris feriarum MD PrinceGeorge ECM0180  (none) ------------------------------
Pseudacris feriarum MO Dunklin ECM0126  (none) -----------------------------G
Pseudacris feriarum MS Lafayette ECM0971  (none) ------------------------------
Pseudacris feriarum MS Oktibbeha ECM0970  (none) ------------------------------
Pseudacris feriarum NC Chatham ECM0189  (none) ------------------------------
Pseudacris feriarum NC Davie ECM0464  (none) -----------------------------G
Pseudacris feriarum NC Johnson ECM0455  (none) ------------------------------
Pseudacris feriarum NC Lincoln MHP10700  (none) ---------------------------AAG
Pseudacris feriarum NC Sampson ECM0453  (none) ------------------------------
Pseudacris feriarum NC Wake ECM0181  (none) ------------------------------
Pseudacris feriarum PA Fulton Highton62076  (none) -----------------------TAAAAAG
Pseudacris feriarum SC Dorchester ECM0441  (none) ----------------------GCCTAAAG
Pseudacris feriarum SC Greenwood ECM1435  (none) ------------------------------
Pseudacris feriarum SC Kershaw Highton61551  (none) ------------------------AAAAAG
Pseudacris feriarum TN Anderson Highton88 43  (none) ------------------------AAAAAG
Pseudacris feriarum TN Blount Highton50960  (none) ------------------------------
Pseudacris feriarum TN Blount JTC2593  (none) ------------------------------
Pseudacris feriarum TN Chester JTC2762  (none) ------------------------AAAAAG
Pseudacris feriarum TN Franklin Highton61673  (none) -------------------------AAAAG
Pseudacris feriarum TN Hamilton ECM0399  (none) ----------------------GCCTAAAG
Pseudacris feriarum TN Obion ECM0131  (none) ----------------------GCCTAAAG
Pseudacris feriarum TN Obion ECM0135  (none) ----------------------GCCTAAAG
Pseudacris feriarum TN Weakley ECM0129  (none) ------------------------------
Pseudacris feriarum VA Mathews ECM0486  (none) --------------------------AAAG
Pseudacris feriarum VA Mathews ECM0601  (none) -----------------------------G
Pseudacris feriarum VA PrinceEdward ECM1011  (none) -----------------------------G
Pseudacris feriarum VA PrinceGeorge ECM0665  (none) ----------------------GCCTAAAG
Pseudacris feriarum VA Southampton ECM1076  (none) ------------------------------
Pseudacris feriarum VA York ECM0481  (none) ------------------------------
Pseudacris feriarum WV Berkeley JTC2857  (none) ------------------------AAAAAG
Pseudacris illinoensis AR Clay ECM0001  (none) ------------------------------
Pseudacris illinoensis IL Cass INHS2003.3  (none) ------------------------------
Pseudacris illinoensis IL Madison INHS2003.9  (none) ------------------------------
Pseudacris illinoensis MO Scott ECM0090  (none) ------------------------TAAAAG
Pseudacris kalmi DE NewCastle Highton62083  (none) ------------------------AAAAAG
Pseudacris kalmi DE Sussex ECM1080  (none) -----------------------------G
Pseudacris kalmi MD Kent ECM0162  (none) -------------------------CTAAG
Pseudacris kalmi MD Kent NJ1  (none) -----------------GGACCCTAAAAAG
Pseudacris kalmi MD Wicomico JTC2738  (none) ------------------------AAAAAG
Pseudacris kalmi NJ Atlantic ECM1115  (none) ------------------------AAAAAG
Pseudacris kalmi NJ Burlington JTC2836  (none) -----------------------TAAAAAG
Pseudacris kalmi NJ Salem Highton62067  (none) ------------------------------
Pseudacris kalmi VA Accomack ECM1064  (none) ------------------------------
Pseudacris kalmi VA Northampton ECM1067  (none) ------------------------------
Pseudacris maculata Alberta Athabasca ECM2099  (none) ------------------------------
Pseudacris maculata CO Archuleta I2  (none) ------------------------------
Pseudacris maculata CO Gunnison I1  (none) ------------------------------
Pseudacris maculata CO Jackson ECM0644  (none) ---------------------GCCTAAAAG
Pseudacris maculata CO Weld JTC2706  (none) ------------------------------
Pseudacris maculata IA Allamakee JTC2613  (none) -----------------------------G
Pseudacris maculata IA Boone JTC2601  (none) ------------------------------
Pseudacris maculata IA Butler JTC2698  (none) -------------------------TAAAG
Pseudacris maculata IA Howard JTC2708  (none) ------------------------------
Pseudacris maculata IA Louisa JTC2674  (none) ------------------------------
Pseudacris maculata IA Marion ECM0604  (none) ----------------------GCCTAAAG
Pseudacris maculata IA Warren ECM0634  (none) ------------------------------
Pseudacris maculata IL Cass INHS1251  (none) -----------------------------G
Pseudacris maculata IL Effingham JTC2805  (none) ------------------------------
Pseudacris maculata IL Jersey INHS1376  (none) -----------------------------G
Pseudacris maculata IL Madison INHS1372  (none) ------------------------------
Pseudacris maculata IL McDonough JTC2843  (none) ------------------------AAAAAG
Pseudacris maculata IL Mercer INHS203  (none) ------------------------------
Pseudacris maculata IL Piatt INHS1267  (none) ------------------------CTAAAG
Pseudacris maculata IN Porter INDU214  (none) ----------------------GCCTAAAG
Pseudacris maculata KS Cherokee MHP8159  (none) ----------------------G???????
Pseudacris maculata KS Cheyenne D3  (none) ------------------------------
Pseudacris maculata KS Douglas A1  (none) ------------------------------
Pseudacris maculata KS Ellis ECM0204  (none) -------------------------TAAAG
Pseudacris maculata KS Kingman K2  (none) ------------------------------
Pseudacris maculata KS Wilson JTC2650  (none) -----------------G?????AAAAA?G
Pseudacris maculata Manitoba JPB13421  (none) ------------------------------
Pseudacris brachyphona AL Cleburne JA0610  (none) ------------------------------
Pseudacris brachyphona AL Elmore ECM0111  (none) -----------------------------G
Pseudacris brachyphona AL Hale JA0601  (none) ------------------------AAAAAG
Pseudacris brachyphona AL Lawrence ECM0452  (none) ----------------------GCCTAAAG
Pseudacris brachyphona AL Tallapoosa ECM0040  (none) ------------------------------
Pseudacris brachyphona AL Tallapoosa ECM0041  (none) ------------------------TAAAAG
Pseudacris brachyphona GA Walker ECM1131  (none) ------------------------------
Pseudacris brachyphona KY Bullitt JTC3086  (none) ------------------------------
Pseudacris brachyphona KY Harlan JTC3104  (none) ------------------------------
Pseudacris brachyphona KY Laurel JTC2457  (none) ------------------------TAAAAG
Pseudacris brachyphona KY Lincoln Highton71747  (none) ------------------------TAAAAG
Pseudacris brachyphona KY Madison ECM0198  (none) ----------------------GCCTAAAG
Pseudacris brachyphona KY Powell JTC2619  (none) ------------------------------
Pseudacris brachyphona KY Taylor JTC2616  (none) -----------------------CCTAAAG
Pseudacris brachyphona MS Itawamba ECM0974  (none) ------------------------------
Pseudacris brachyphona NC Cherokee ECM1897  (none) ------------------------------
Pseudacris brachyphona OH Adams JTC3084  (none) ------------------------------
Pseudacris brachyphona OH Hocking JTC2609  (none) ------------------------------
Pseudacris brachyphona OH Washington ECM2070  (none) ------------------------------
Pseudacris brachyphona TN Sullivan JTC3092  (none) ------------------------------
Pseudacris brachyphona VA Bland Highton97 7  (none) -------------------------AAAAG
Pseudacris brachyphona WV Harrison JTC2669  (none) ------------------------------
Pseudacris brachyphona WV Raleigh Highton97 5  (none) -----------------------------G
Pseudacris brachyphona WV Wayne JTC2705  (none) ------------------------------
Pseudacris brachyphona WV Wetzel JTC2834  (none) ------------------------AAAAAG
Pseudacris brimleyi NC Craven ECM0469  (none) -----------------------------G
Pseudacris brimleyi NC Pitt ECM0079  (none) ------------------------------
Pseudacris brimleyi NC Sampson ECM0460  (none) ------------------------------
Pseudacris brimleyi SC Hampton Highton68852  (none) ------------------------------
Pseudacris brimleyi SC Orangeburg Highton67234  (none) -----------------AGACCCTAAAAAG
Pseudacris brimleyi VA IsleofWight ECM1100  (none) -------------------------AAAAG
Pseudacris brimleyi VA PrinceGeorge ECM0612  (none) ---------------------GCCCTAAAG
Pseudacris brimleyi VA SuffolkCity ECM1077  (none) ------------------------------
Pseudacris cadaverina CA SanBernardino ECM0150  (none) -----------------------CTAAAAG
Pseudacris clarkii KS Barber JTC2454  (none) ------------------------------
Pseudacris clarkii KS Barber JTC2455  (none) ------------------------TAAAAG
Pseudacris clarkii KS Chautauqua ECM2467  (none) ------------------------------
Pseudacris clarkii KS Chautauqua Q1  (none) ----------------------------TG
Pseudacris clarkii KS Comanche ECM0210  (none) ------------------------------
Pseudacris clarkii OK Garfield ECM1133  (none) -------------------------TAAAG
Pseudacris clarkii TX Caldwell ECM2478  (none) ---------------------------AAG
Pseudacris clarkii TX Cameron JTC2828  (none) ------------------------AAAAAG
Pseudacris clarkii TX Swisher ECM1143  (none) ------------------------------
Pseudacris crucifer AL Barbour ECM0039  (none) ------------------------TAAAAG
Pseudacris crucifer FL Lake Y1  (none) ------------------------TAAAAG
Pseudacris crucifer MD Kent ECM0166  (none) ------------------------------
Pseudacris crucifer SC Barnwell ECM0083  (none) ------------------------------
Pseudacris feriarum AL Choctaw ECM0961  (none) -----------------------------G
Pseudacris feriarum AL Conecuh ECM0960  (none) -----------------------------G
Pseudacris feriarum AL Cullman ECM0992  (none) ------------------------------
Pseudacris feriarum AL Elmore ECM0122  (none) ------------------------------
Pseudacris feriarum AL Henry ECM0386  (none) ------------------------------
Pseudacris feriarum AL Macon ECM0387  (none) ----------------------GCCTAAAG
Pseudacris feriarum AL Macon ECM0400  (none) ------------------------------
Pseudacris feriarum AL Morgan JTC2740  (none) ------------------------------
Pseudacris feriarum AL Pickens ECM0969  (none) ------------------------------
Pseudacris feriarum FL Calhoun ECM0368  (none) ------------------------------
Pseudacris feriarum FL Gasden ECM0382  (none) ------------------------------
Pseudacris feriarum FL Liberty ECM0232  (none) ----------------------GCCTAAAG
Pseudacris feriarum GA Appling ECM0602  (none) ------------------------------
Pseudacris feriarum GA Baker ECM0402  (none) -------------------------CTAAG
Pseudacris feriarum GA Banks ECM0298  (none) -----------------------TAAAAAG
Pseudacris feriarum GA Decatur ECM0383  (none) ----------------------GCCTAAAG
Pseudacris feriarum GA Floyd ECM0446  (none) ------------------------------
Pseudacris feriarum GA Greene ECM1454  (none) ------------------------------
Pseudacris feriarum GA Heard ECM0448  (none) ---------------------GCCCTAAAG
Pseudacris feriarum GA Houston ECM1130  (none) ------------------------------
Pseudacris feriarum GA Oglethorpe JTC2578  (none) ------------------------------
Pseudacris feriarum GA Seminole ECM0384  (none) ----------------------GCCTAAAG
Pseudacris feriarum GA Walton ECM1125  (none) ------------------------------
Pseudacris feriarum IL Pulaski INHS1196  (none) ------------------------------
Pseudacris feriarum KY Calloway F1  (none) ------------------------------
Pseudacris feriarum KY Lincoln Highton71758  (none) ------------------------AAAAAG
Pseudacris feriarum KY McCracken JTC2615  (none) -----------------------------G
Pseudacris maculata MN Cook 03BEJ007  (none) ------------------------------
Pseudacris maculata MN Fillmore JTC2645  (none) ----------------------GCCTAAAG
Pseudacris maculata MN Itasca ECM0209  (none) ------------------------------
Pseudacris maculata MN LacquiParle UMN14316  (none) ------------------------------
Pseudacris maculata MN OtterTail UMN14336  (none) ------------------------------
Pseudacris maculata MN Ramsey ECM0645  (none) ------------------------CTAAAG
Pseudacris maculata MN Rock UMN14285  (none) ------------------------------
Pseudacris maculata MN StLouis 03EKH001  (none) ------------------------------
Pseudacris maculata MN Wright UMN14283  (none) -----------------------------G
Pseudacris maculata MO Adair JTC2596  (none) ----------------------GCCTAAAG
Pseudacris maculata MO Boone JTC2600  (none) ----------------------GCCTAAAG
Pseudacris maculata MO Christian MHP10467  (none) ------------------------------
Pseudacris maculata MO Cole JTC2588  (none) ------------------------------
Pseudacris maculata MO Dade MHP10265  (none) ------------------------------
Pseudacris maculata MO Newton MHP10268  (none) ------------------------------
Pseudacris maculata ND Pembina UMN14327  (none) ----------------------GCCTAAAG
Pseudacris maculata ND Ward ECM1156  (none) ------------------------------
Pseudacris maculata NE Douglas JTC2862  (none) -------------------------AAAAG
Pseudacris maculata NM McKinley N5  (none) ------------------------------
Pseudacris maculata OK Cherokee JTC2832  (none) -------------------------AAAAG
Pseudacris maculata OK Washington JTC2760  (none) ------------------------------
Pseudacris maculata Ontario EarFalls R1  (none) ------------------------------
Pseudacris maculata Ontario Fraleigh JPB22607  (none) -----------------------------G
Pseudacris maculata Ontario Frontenac ECM0105  (none) ------------------------TAAAAG
Pseudacris maculata Ontario Frontenac JTC2630  (none) ------------------------------
Pseudacris maculata Ontario Wellington JTC2687  (none) -----------------------------G
Pseudacris maculata SD Lawrence JTC2700  (none) ------------------------CTAAAG
Pseudacris maculata UT Cache JRM4868  (none) ----------------------GCCTAAAG
Pseudacris maculata WI Bayfield ECM1140  (none) ------------------------------
Pseudacris maculata WI StCroix ECM0652  (none) ----------------------GCCTAAAG
Pseudacris maculata WI Wood DCC3851  (none) -----------------------------G
Pseudacris nigrita AL Barbour ECM0036  (none) ------------------------------
Pseudacris nigrita FL Brevard ECM0024  (none) -----------------------------G
Pseudacris nigrita FL Calhoun ECM0215  (none) -------------------------TAAAG
Pseudacris nigrita FL Franklin ECM0371  (none) ------------------------------
Pseudacris nigrita FL Jefferson ECM0372  (none) ----------------------GCCTAAAG
Pseudacris nigrita FL Liberty ECM0242  (none) ----------------------GCCTAAAG
Pseudacris nigrita FL Liberty ECM0359  (none) ----------------------GCCTAAAG
Pseudacris nigrita GA Baker ECM0422  (none) ----------------------GCCTAAAG
Pseudacris nigrita GA Liberty ECM0603  (none) ------------------------------
Pseudacris nigrita GA McIntosh ECM1801  (none) ------------------------------
Pseudacris nigrita MS Harrison ECM0261  (none) ----------------------GCCTAAAG
Pseudacris nigrita MS Harrison ECM0290  (none) -----------------------------G
Pseudacris nigrita NC Scotland U1  (none) ------------------------TAAAAG
Pseudacris nigrita SC Barnwell ECM0087  (none) ------------------------TAAAAG
Pseudacris nigrita SC Dorchester ECM0442  (none) ----------------------GCCTAAAG
Pseudacris nigrita VA PrinceGeorge ECM0609  (none) -----------------------------G
Pseudacris nigrita VA Surrey ECM1097  (none) ------------------------------
Pseudacris nigrita VA Sussex ECM0666  (none) ------------------------------
Pseudacris nigrita VA York ECM0482  (none) ---------------------GCCTAAAAG
Pseudacris ocularis FL Gulf ECM0095  (none) ------------------------------
Pseudacris ocularis SC Barnwell ECM0045  (none) -----------------------TAAAAAG
Pseudacris ornata AL Barbour ECM0033  (none) --------------------------GGTG
Pseudacris ornata SC Aiken ECM0055  (none) ----------------------------GT
Pseudacris regilla CA SanBernardino ECM0147  (none) ------------------------------
Pseudacris spnov AR Conway ASUMZ27608  (none) ------------------------------
Pseudacris spnov AR Craighead ECM0011  (none) ------------------------TAAAAG
Pseudacris spnov AR Perry ECM0270  (none) ------------------------------
Pseudacris spnov AR Sebastian ASUMZ27612  (none) ------------------------------
Pseudacris spnov AR Yell ASUMZ27611  (none) ------------------------------
Pseudacris spnov LA Beauregard ECM0139  (none) ----------------------------AG
Pseudacris spnov LA EastBatonRouge ECM0029  (none) ------------------------TAAAAG
Pseudacris spnov LA Evangeline ECM0137  (none) ------------------------------
Pseudacris spnov LA RedRiver ECM1155  (none) ----------------------GCCTAAAG
Pseudacris spnov LA St. Martin ECM2437  (none) ------------------------------
Pseudacris spnov LA StTammany ECM0264  (none) ----------------------GCCTAAAG
Pseudacris spnov LA StTammany ECM0268  (none) ------------------------------
Pseudacris spnov LA Washington ECM0124  (none) --------------------GCCTAAAAAG
Pseudacris spnov MO Ripley JTC2829  (none) ------------------------------
Pseudacris spnov MS Hancock ECM0332  (none) ------------------------------
Pseudacris spnov MS Marion ECM0260  (none) ----------------------GCCTAAAG
Pseudacris spnov MS Simpson ECM0258  (none) ---------------------GCCTAAAAG
Pseudacris spnov MS Simpson ECM0259  (none) ------------------------------
Pseudacris spnov OK LeFlore Highton71204  (none) ------------------------AAAAAG
Pseudacris spnov OK Love JTC2860  (none) -----------------------AAAAAAG
Pseudacris spnov OK McCurtain JTC2866  (none) ------------------------AAAAAG
Pseudacris spnov OK Osage JTC2737  (none) GGTTTACCGAAAAGTTAGAGGACCTAAAAG
Pseudacris spnov OK Pittsburg JTC2847  (none) --------------------------AAAG
Pseudacris spnov TX Jasper ECM2293  (none) ------------------------------
Pseudacris spnov TX Lamar JTC2586  (none) -----------------------------G
Pseudacris spnov TX Liberty ECM2294  (none) ------------------------------
Pseudacris spnov TX Liberty ECM2295  (none) ------------------------------
Pseudacris streckeri AR Conway JTC2581  (none) ------------------------CTAAAG
Pseudacris streckeri TX Travis P2  (none) -----------------------TAGAAGT
Pseudacris triseriata CheckOtherData JTC2715  (none) ---------------------GCCTAAAAG
Pseudacris triseriata IL Lawrence INHS1234  (none) ---------------------GCCTAAAAG
Pseudacris triseriata IL Perry INHS1207  (none) -----------------------------G
Pseudacris triseriata IL Saline INHS1239  (none) ------------------------CTAAAG
Pseudacris triseriata IL Wayne INHS1581  (none) ------------------------------
Pseudacris triseriata IN Delaware JTC2830  (none) -----------------------------G
Pseudacris triseriata IN Jennings JTC2723  (none) -----------------------AAAAAAG
Pseudacris triseriata IN Marion JTC2851  (none) ----------------------TAAAAAAG
Pseudacris triseriata IN Posey Highton69234  (none) ------------------------------
Pseudacris triseriata KY Daviess JTC2594  (none) ------------------------CTAAAG
Pseudacris triseriata KY Jefferson JTC2709  (none) ------------------------------
Pseudacris triseriata MI Berrien J1  (none) ------------------------------
Pseudacris triseriata MI Ingham ECM0615  (none) ------------------------------
Pseudacris triseriata MI Ingham ECM0616  (none) ------------------------CTAAAG
Pseudacris triseriata NY Livingston JTC2848  (none) ------------------------AAAAAG
Pseudacris triseriata NY Niagara JTC2639  (none) -----------------------------G
Pseudacris triseriata OH Clinton JTC2605  (none) -----------------------------G
Pseudacris triseriata OH Highland JTC2604  (none) ------------------------------
Pseudacris triseriata OH Logan JTC2590  (none) -----------------------------G
Pseudacris triseriata OH Preble JTC2607  (none) -----------------------GCCTAAG
Pseudacris triseriata Ontario Essex ECM0662  (none) ------------------------CTAAAG
Pseudacris triseriata Ontario Halton JTC2678  (none) ------------------------------
Pseudacris triseriata Ontario Niagara JTC2682  (none) ----------------------GCCTAAAG
Pseudacris triseriata Ontario Oxford JTC2679  (none) ------------------------------
Pseudacris triseriata Ontario Waterloo JTC2690  (none) ------------------------------
Pseudacris triseriata TN Montgomery JTC2611  (none) -------------------------TAAAG

Columns

None of the columns has a description.