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Matrix 4918 of Study 10296

About Citation title: "The phylogenetic position of milkweeds (Apocynaceae subfamilies Secamonoideae and Asclepiadoideae): evidence from the nucleus and chloroplast.".
About This study was previously identified under the legacy study ID S2659 (Status: Published).

Matrices

Title: matrix 1 PHYA clones and direct sequences as terminals

Description: Legacy TreeBASE Matrix ID = M5119

Rows

Taxon Label Row Segments Characters 1?–30
Aganosma cymosa  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Aganosma wallichii  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Alafia barteri  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Alafia thouarsii  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Allomarkgrafia brenesiana  (none) ??????????????????????????????
Amphineurion marginatum  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT
Angadenia berteroi  (none) ??????????????????????????????
Angadenia sagraei  (none) ??????????????????????AAGCGATT
Anodendron oblongifolium  (none) CAGTCCTATAAGCTTGCTGCAAAAGCTATT
Anodendron paniculatum  (none) CAGTC?TATAAGCT?GCTGCAAAAGCTATT
Apocynum androsaemifolium  (none) ??????????????TGCTGGAAAAGCTAT{
Artia balansae  (none) CAGTCATATAAGCTTGCTGCAAA?GCTATT
Baissea multiflora  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Beaumontia grandiflora  (none) CAGTCATATAAGCTTGCTGCAAA?GCTATT
Chonemorpha fragrans  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Cleghornia malaccensis  (none) CAGTCATATAAGCTGGCTGCGAAAGCTATT
Cryptolepis sinensis  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT
Cycladenia humilis  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Dewevrella cochliostema  (none) ??????????????????????????????
Echites umbellatus  (none) CAGTCATATAAGCTTGCTGCTAAAGCTATT
Echites woodsonianus  (none) ????????????????????????GCTATT
Elytropus chilensis  (none) CAGTCATATAAGCTTGCTGCAAA?GCTATT
Epigynum cochinchinense  (none) ??????????????????????????TATT
Finlaysonia insularum  (none) CAGTCATAT?AGC?TGCTGCAAAAGCCATT
Fockea edulis  (none) ???????????????GCTGCA?AAGCTATT
Forsteronia guyanensis  (none) ??????????????????????????????
Funtumia elastica c. 1  (none) ??????????????????????????????
Funtumia elastica c. 2  (none) ??GTCATATAAGCTTGCTGCAAAAGCTATC
Funtumia elastica c. 5  (none) ??????????????????????????????
Galactophora schomburgkiana  (none) ??????????????????????????????
Gymnanthera oblonga  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT
Heterostemma piperifolium  (none) CAGTCATATAAACTTGCTGCAAAAGCTATT
Holarrhena curtisii Middleton et al. 2042 c. 1  (none) CAGTCATATGAGCTTGCTGCAAAAGCTATC
Holarrhena curtisii Middleton et al. 2042 c. 3  (none) ??????????????????????????????
Holarrhena curtisii Middleton Lamxay 253 c. 2  (none) CAGTCATATGAGCTTGCTGCAAAAGCTATC
Holarrhena curtisii Middleton Lamxay 253 c. 3  (none) CAGTCATATAAACTTGCTGCAAAAGCTATA
Holarrhena curtisii Middleton Lamxay 253 c. 4  (none) CAGTCATATAAACTTGCTGCAAAAGCTATA
Holarrhena curtisii Middleton Lamxay 253 c. 5  (none) CAGTCATATAAACTTGCTGCAAAAGCTATA
Ichnocarpus frutescens  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Isonema smeathmannii  (none) ??????????AAC?TGCTGCAAAAGCTAT?
Laubertia contorta  (none) ??????????????????????????????
Mandevilla boliviensis  (none) CAGTCAT{AT}TAAGCTTGCTGCAAAAGCT
Marsdenia glabra  (none) CAGTCATATAAACTTGCTGCAAAAGCTATT
Motandra guineensis  (none) ??????????????????????????????
Neobracea valenzuelana c. 1  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATC
Neobracea valenzuelana c. 2  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATC
Neobracea valenzuelana c. 3  (none) ??????????????????????????????
Neobracea valenzuelana c. 4  (none) ??????????????????????????????
Neobracea valenzuelana c. 5  (none) ??????????????????????????????
Odontadenia perrottetti  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Oncinotis tenuiloba  (none) CAGTCATATAAGC?TGCTGCAAA?GCTATT
Pachypodium baroni  (none) CAATCGTATAAGCTTGCTGCAAAAGCTATT
Papuechites aambe  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Parameria laevigata  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Parsonsia eucalyptophylla  (none) ????????????????????????GCTATT
Peltastes isthmicus  (none) CAGTCATATAAGCTTGCTGCAAA?GCTATT
Peltastes peltatus  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Pentalinon luteum  (none) ??????????AACTTGCTGCAAA?GCGATT
Petopentia natalensis  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT
Phyllanthera grayi  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT
Pinochia corymbosa  (none) ??????????????????????????????
Prestonia coalita  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Prestonia lagoensis  (none) CAGTCATA{CT}AAGCTTGCTGCAAAAGCT
Rhabdadenia biflora c. 1  (none) CAGTCATATAAGCTTGCTGCAAAGGCTATT
Rhabdadenia biflora c. 2  (none) CAGTCATATAAACTTGCGGCAAAGGCTATT
Rhabdadenia biflora c. 3  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Rhabdadenia biflora c. 4  (none) CAGTCATATAAACTTGCGGCAAAGGCTATT
Rhabdadenia macrostoma  (none) ??????????????????????????????
Rhabdadenia pohlii  (none) CAGTCATATAAGCTTGCTGCAAAGGCTATT
Rhodocalyx rotundifolius  (none) ????????????????????CAAAGCTATT
Secamone elliptica c. 1  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Secamone elliptica c. 2  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Secamone elliptica c. 5  (none) ??????????????????????????????
Secondatia densiflora  (none) ?????????AAGCTTGCTGCAAAAGCTATT
Sindechites chinensis  (none) CAGTCGTATAAGCTTGCTGCAAAGGCTATC
Sindechites henryi  (none) ??????????????????????????????
Stipecoma peltigera  (none) CAGTCATATAAG{CT}TAGCTGCAAAAGCT
Strophanthus boivini  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Temnadenia odorifera  (none) ??????????????????????AAGCTATT
Temnadenia violacea  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Thrysanthella difformis  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Toxocarpus villosus  (none) CAGTCATATAAGCTTGCTGCAAA?GCTATT
Urceola lucida  (none) ?????????????????????????????T
Vallaris solanacea  (none) ?????????????TTGC??AAAAAGCTATT
Wrightia coccinea  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Wrightia dubia  (none) CAGTCATATAAGCTTGCTGCAAAAGCTATT
Zygostelma benthamii c. 1  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT
Zygostelma benthamii c. 4  (none) CAGTCATATAAGCTTGCTGCAAAAGCCATT

Columns

None of the columns has a description.